FC931379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PSEFS (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Pseudomonas fluorescens (strain SBW25) GN=ispD PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.055e-12 Identity = 53/167 (31.74%), Postives = 86/167 (51.50%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDF----NSELVCIHDSARPLVLSKDVQKVLMDALR--VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 ++ A G G RM A+ PKQYL L G+ I +S F +K +VV DP + + +I + + G ER SV + L +++ + + V +HD+ARP + D+ K+L + VG +L VPA+ T+K + V+ T+DR +W+ TPQ+ Sbjct: 11 VIPAAGVGARMAADRPKQYLQLGGRTILEHSLGCFLDHPSLKGLVVSLAADDPYWPSLACAADPRI----QRAEGGSERSGSVLNALLQLNALGAGDDDWVLVHDAARPNLSRDDLDKLLAELADDPVGG-LLAVPARDTLKRVDKYGRVIETVDRSLIWQAYTPQM 172
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_YERPY (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=ispD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.601e-12 Identity = 49/161 (30.43%), Postives = 83/161 (51.55%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLM--DALRVGAAVLGVPAKATIKEANSE-SFVVRTLDRKTLWEMQTPQV 678 +L A G G RM A+ PKQYL + G+ I ++ ++ ++ ++VV P + F + + G +R +SV +GLQ +E V +HD+ARP + D+ ++L + +VG +L P + T+K A + T+DR+ LW TPQ+ Sbjct: 14 VLPAAGIGSRMLADCPKQYLTVGGKTIIEHAIFSLLHHPRIQRVIVVIHPQDTQ-FSRLSVAQDPRISTVYGGDQRANSVMAGLQLAG-QAEWVLVHDAARPCLHLDDLSRLLSITECSQVGG-ILAAPVRDTMKRAEPGIQAIAHTVDRQDLWHALTPQL 171
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_YERPS (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Yersinia pseudotuberculosis GN=ispD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.601e-12 Identity = 49/161 (30.43%), Postives = 83/161 (51.55%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLM--DALRVGAAVLGVPAKATIKEANSE-SFVVRTLDRKTLWEMQTPQV 678 +L A G G RM A+ PKQYL + G+ I ++ ++ ++ ++VV P + F + + G +R +SV +GLQ +E V +HD+ARP + D+ ++L + +VG +L P + T+K A + T+DR+ LW TPQ+ Sbjct: 14 VLPAAGIGSRMLADCPKQYLTVGGKTIIEHAIFSLLHHPRIQRVIVVIHPQDTQ-FSRLSVAQDPRISTVYGGDQRANSVMAGLQLAG-QAEWVLVHDAARPCLHLDDLSRLLSITECSQVGG-ILAAPVRDTMKRAEPGIQAIAHTVDRQDLWHALTPQL 171
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_YERPB (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=ispD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.601e-12 Identity = 49/161 (30.43%), Postives = 83/161 (51.55%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLM--DALRVGAAVLGVPAKATIKEANSE-SFVVRTLDRKTLWEMQTPQV 678 +L A G G RM A+ PKQYL + G+ I ++ ++ ++ ++VV P + F + + G +R +SV +GLQ +E V +HD+ARP + D+ ++L + +VG +L P + T+K A + T+DR+ LW TPQ+ Sbjct: 14 VLPAAGIGSRMLADCPKQYLTVGGKTIIEHAIFSLLHHPRIQRVIVVIHPQDTQ-FSRLSVAQDPRISTVYGGDQRANSVMAGLQLAG-QAEWVLVHDAARPCLHLDDLSRLLSITECSQVGG-ILAAPVRDTMKRAEPGIQAIAHTVDRQDLWHALTPQL 171
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_YERP3 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=ispD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.601e-12 Identity = 49/161 (30.43%), Postives = 83/161 (51.55%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLM--DALRVGAAVLGVPAKATIKEANSE-SFVVRTLDRKTLWEMQTPQV 678 +L A G G RM A+ PKQYL + G+ I ++ ++ ++ ++VV P + F + + G +R +SV +GLQ +E V +HD+ARP + D+ ++L + +VG +L P + T+K A + T+DR+ LW TPQ+ Sbjct: 14 VLPAAGIGSRMLADCPKQYLTVGGKTIIEHAIFSLLHHPRIQRVIVVIHPQDTQ-FSRLSVAQDPRISTVYGGDQRANSVMAGLQLAG-QAEWVLVHDAARPCLHLDDLSRLLSITECSQVGG-ILAAPVRDTMKRAEPGIQAIAHTVDRQDLWHALTPQL 171
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SYNPX (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Synechococcus sp. (strain WH8102) GN=ispD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.601e-12 Identity = 47/157 (29.94%), Postives = 70/157 (44.59%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ A G G+RMGA+ K LPL G+P+ ++ ++ I VV + + N + + G RQ+SV GL + +E V IHD AR L + M A + P TIK +++ + T DR LW QTPQ Sbjct: 4 LIAAAGSGRRMGADRNKLLLPLAGKPVIAWTLKAALAAEHIQWIGVVGQEIDREPILDLVRDANKPVTWIQGGSTRQESVLRGLAGLPEAAEQVLIHDGARCLAEPALFDRCAMALASGQALIAATPVTDTIKRVDADGVITDTPDRSELWAAQTPQ 160
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_ENTS8 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=ispD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.601e-12 Identity = 46/161 (28.57%), Postives = 82/161 (50.93%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLM--DALRVGAAVLGVPAKATIKEAN-SESFVVRTLDRKTLWEMQTPQV 678 ++ A G G RM PKQYL + Q I ++ + + +++ P+ F + D++ G +R DSV +GLQ ++ +HD+ARP + ++D++++L + +VG +L PA T+K A + + T+DR+ LW TPQ+ Sbjct: 11 VVPAAGIGSRMQTECPKQYLTIGNQTILEHAVAPLLQHPRISRVIIAISPA-DTAFARLPLAAHPDIQVVRGGAQRADSVLAGLQAAG-DARWALVHDAARPCLSAQDLERLLALTETSQVGG-ILAAPACDTMKRAEPGKPAIAHTVDRENLWHALTPQL 168
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDF_PELUB (Bifunctional enzyme ispD/ispF OS=Pelagibacter ubique GN=ispDF PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.601e-12 Identity = 50/160 (31.25%), Postives = 89/160 (55.62%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINV-DLKFSLPGKERQDSVYSGLQEV-DFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVL-GVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 I+LAGG+ KR +N PK Y G+P+ L+S + +IV+V + + + +K+N+ +++ GK R +S Y+ L+ + + N + V IHD+ARP K + K LM+ L++ V+ + T+K+ S + V+ L R+ ++ +QTPQ Sbjct: 6 IILAGGESKRFNSNTPKPYTNYKGKPLLLHSIDKAKVFNKFNKIVLVVNKKHKNFI----KKLNIKNIRIITGGKTRAESAYNALKSIKENNFKNVIIHDAARPNFSLKLLNK-LMNELKLNDCVIPAIQTADTVKQKISNN--VKNLKRENIYLIQTPQ 158
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_WIGBR (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Wigglesworthia glossinidia brevipalpis GN=ispD PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12 Identity = 51/162 (31.48%), Postives = 83/162 (51.23%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVL-MDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 I A G GKRMG PKQY+ + + I +S F + VK+I++ D ++ + +KIN+ + GK R +SV S L+ V + V +HD+ RP + D+ K+L + + A+L P T+K++ +F+ T+ R LW TPQ+ Sbjct: 10 IFPAAGIGKRMGYKYPKQYIKIKNKTILEHSISLFIDKIYVKKILIAINKKDYWFNKLSILKNKKINI----VIGGKSRTESVISALKFVS-KVDWVLVHDAVRPCLHKNDLNKLLKVINISPFGAILAAPIYDTVKKSYG-NFISHTIKRNKLWRALTPQL 165
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_RALSO (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Ralstonia solanacearum GN=ispD PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12 Identity = 47/173 (27.17%), Postives = 81/173 (46.82%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPS-------YSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEV----DFNSELVCIHDSAR----PLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 ++ + G G R G ++PKQY PL G+P+ ++ F + +VVV P + + + + VD G R SV +GL + + V +HD+AR P ++++ V V D + +L +P T+K A++ + T+ R LW+ QTPQ+ Sbjct: 14 LIPSAGTGTRAGGDLPKQYQPLAGRPMLWHTVQAFLASAAIDRVVVVTSPGAPALAARFPGLGFDAARLVEVD----CGGDSRHASVTNGLAALRGLGAHEDDWVLVHDAARPGLTPALIARLVGAVEADGGQAVGGILALPVADTLKRADAGQHIAETVPRGGLWQAQTPQM 182 The following BLAST results are available for this feature:
BLAST of FC931379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931379 ID=FC931379; Name=FC931379; organism=Citrus clementina; type=EST; length=750bpback to top |