FC931379

Overview
NameFC931379
Unique NameFC931379
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_YERPP (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Yersinia pestis (strain Pestoides F) GN=ispD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 48/161 (29.81%), Postives = 82/161 (50.93%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLM--DALRVGAAVLGVPAKATIKEANSE-SFVVRTLDRKTLWEMQTPQV 678
            +L A G G RM  + PKQYL + G+ I  ++ ++      ++ ++VV  P  +  F       +  +     G +R +SV +GLQ     +E V +HD+ARP +   D+ ++L   +  +VG  +L  P + T+K A      +  T+DR+ LW   TPQ+
Sbjct:   14 VLPAAGIGSRMLVDCPKQYLTVGGKTIIEHAIFSLLHHPRIQRVIVVIHPQDTQ-FSRLSVAQDPRISTVYGGDQRANSVMAGLQLAG-QAEWVLVHDAARPCLHLDDLSRLLSITECSQVGG-ILAAPVRDTMKRAEPGIQAIAHTVDRQDLWHALTPQL 171          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_YERPN (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=ispD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 48/161 (29.81%), Postives = 82/161 (50.93%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLM--DALRVGAAVLGVPAKATIKEANSE-SFVVRTLDRKTLWEMQTPQV 678
            +L A G G RM  + PKQYL + G+ I  ++ ++      ++ ++VV  P  +  F       +  +     G +R +SV +GLQ     +E V +HD+ARP +   D+ ++L   +  +VG  +L  P + T+K A      +  T+DR+ LW   TPQ+
Sbjct:   14 VLPAAGIGSRMLVDCPKQYLTVGGKTIIEHAIFSLLHHPRIQRVIVVIHPQDTQ-FSRLSVAQDPRISTVYGGDQRANSVMAGLQLAG-QAEWVLVHDAARPCLHLDDLSRLLSITECSQVGG-ILAAPVRDTMKRAEPGIQAIAHTVDRQDLWHALTPQL 171          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_YERPG (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=ispD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 48/161 (29.81%), Postives = 82/161 (50.93%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLM--DALRVGAAVLGVPAKATIKEANSE-SFVVRTLDRKTLWEMQTPQV 678
            +L A G G RM  + PKQYL + G+ I  ++ ++      ++ ++VV  P  +  F       +  +     G +R +SV +GLQ     +E V +HD+ARP +   D+ ++L   +  +VG  +L  P + T+K A      +  T+DR+ LW   TPQ+
Sbjct:   14 VLPAAGIGSRMLVDCPKQYLTVGGKTIIEHAIFSLLHHPRIQRVIVVIHPQDTQ-FSRLSVAQDPRISTVYGGDQRANSVMAGLQLAG-QAEWVLVHDAARPCLHLDDLSRLLSITECSQVGG-ILAAPVRDTMKRAEPGIQAIAHTVDRQDLWHALTPQL 171          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_YERPE (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Yersinia pestis GN=ispD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 48/161 (29.81%), Postives = 82/161 (50.93%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLM--DALRVGAAVLGVPAKATIKEANSE-SFVVRTLDRKTLWEMQTPQV 678
            +L A G G RM  + PKQYL + G+ I  ++ ++      ++ ++VV  P  +  F       +  +     G +R +SV +GLQ     +E V +HD+ARP +   D+ ++L   +  +VG  +L  P + T+K A      +  T+DR+ LW   TPQ+
Sbjct:   14 VLPAAGIGSRMLVDCPKQYLTVGGKTIIEHAIFSLLHHPRIQRVIVVIHPQDTQ-FSRLSVAQDPRISTVYGGDQRANSVMAGLQLAG-QAEWVLVHDAARPCLHLDDLSRLLSITECSQVGG-ILAAPVRDTMKRAEPGIQAIAHTVDRQDLWHALTPQL 171          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_XANC5 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ispD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 50/166 (30.12%), Postives = 80/166 (48.19%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFN---SELVCIHDSARPLVLSKDVQKVLMDALRVG-----AAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678
            I+ A G+G R G  +PKQYLP  GQP+  Y+    +    +  I+V   P  +D    T  + +  +   L G  R  SV +GL  +  +    + V +HD+ARP +   D+ ++    L +G      A+L  P + T+K A  +  +  T  R+ LW   TPQ+
Sbjct:    8 IVPAAGRGTRFGGPLPKQYLPAGGQPLMAYTLAALAAHPALAGIMVAIAPGDADWPGWTAVQ-STPVLTCLGGASRAASVLAGLLALPESVRADDFVLVHDAARPNLALADLDRL----LEIGRGDPVGAILAAPVRDTLKRAGDDGGIDGTEPRERLWRALTPQL 168          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PSEU2 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ispD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 56/168 (33.33%), Postives = 87/168 (51.79%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVV---VCDPSYSDIFEETKEKIN-VDLKFSLPGKERQDSVYSGLQEVDF----NSELVCIHDSARPLVLSKDVQKVLMDALR--VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678
            ++ A G G RM A+ PKQYL L G  I  +S   F     +K +V+   V DP ++ +      +I  VD      G ER  SV + L  +      +++ V +HD+ARP +   D+  +L +     VG  +L VPA+ T+K A+S   V+ T+DR  +W+  TPQ+
Sbjct:   11 VIPAAGIGARMAADRPKQYLSLGGLTILEHSLLCFLDHPRLKGLVISLAVDDPYWAALPCAHDTRIQRVD-----GGSERSGSVLNALLHLHAQGASDNDWVLVHDAARPNLARSDLDNLLGELADDPVGG-LLAVPARDTLKRADSSGRVLETVDRSLVWQAFTPQM 172          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_AZOPC (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=ispD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 51/160 (31.87%), Postives = 79/160 (49.38%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKIN--VDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678
            I++AGG G RM A +PKQ+L L G+PI +++   F R      I++V        +    ++ N  +D      G  R  SV +GL  V  N  LV +HD  RPLV  K +      A +  A    +P   +++E  + +   RT++R   + +QTPQV
Sbjct:    7 IIVAGGNGLRMKATIPKQFLLLKGKPILMHTIEAFYRYDTDIHIILVLSEKQKTYWTSLCQQYNFKIDHHTIEGGITRFYSVKNGLFSVKKNC-LVAVHDGVRPLVREKLIDNAFKMAQKALAVYPAIPITDSLREITNRN--NRTVNRSEFYLVQTPQV 163          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: TARI_BACSU (Putative ribitol-5-phosphate cytidylyltransferase OS=Bacillus subtilis GN=tarI PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.509e-11
Identity = 47/165 (28.48%), Postives = 88/165 (53.33%), Query Frame = 1
Query:  208 LLAGGKGKRMG-ANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEK-INVDLKFSLP--GKERQDSVYSGLQEVDF-----NSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            +LAGGKG RMG  NMPKQ+LPL  +PI +++   F       +I++V    + +  ++  +K I  D +  +   G +R +S+ SG++ ++      +++++  HDS RP +  + + + +   L+ GA    + A  TI  +  + F+     R  +++ QTPQ
Sbjct:    6 ILAGGKGSRMGNVNMPKQFLPLNKRPIIIHTVEKFLLNDRFDKILIVSPKEWINHTKDILKKFIGQDDRLVVVEGGSDRNESIMSGIRYIEKEFGIQDNDVIITHDSVRPFLTHRIIDENIDAVLQYGAVDTVISAIDTIIASEDQEFISDIPVRDNMYQGQTPQ 170          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SYNSC (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Synechococcus sp. (strain CC9605) GN=ispD PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.509e-11
Identity = 46/157 (29.30%), Postives = 70/157 (44.59%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            ++ A G G+RMGA+  K  LPL G+P+  ++     R   ++ I +V      +      ++ +  + +   G  RQ+SV  GL  +   +  V IHD AR L   K   +         A +   P   TIK   S+  +  T DR  LW  QTPQ
Sbjct:    4 LIAAAGSGRRMGADRNKLLLPLAGRPVIAWTIEAALRSERIEWIGIVGQEVDREAILAVLDEPSKPVHWIQGGSTRQESVLCGLAGLPEQARHVLIHDGARCLAEPKLFDRCAAVVEDGTALIAATPVSDTIKRVGSDGVIRDTPDRSELWAAQTPQ 160          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_KLEP7 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=ispD PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.509e-11
Identity = 48/160 (30.00%), Postives = 79/160 (49.38%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKV--LMDALRVGAAVLGVPAKATIKEAN-SESFVVRTLDRKTLWEMQTPQ 675
            ++ A G G+RM    PKQYL +  + I  ++         V+ +V+   P     F +     +  +     G ER DSV +GLQ +   ++ V +HD+ARP +   D+ ++  L +  RVG  +L  P + T+K A   ++ +  T+DR  LW   TPQ
Sbjct:   11 VVPAAGFGRRMQTECPKQYLSIGNKTILEHAVAALLADARVQRVVIAVSPG-DRRFSQLPLAQHPQITVVDGGAERADSVLAGLQALP-EAQWVLVHDAARPCLHQDDLSRLLSLCETSRVG-GILAAPVRDTMKRAEPGKTAIAHTVDRNDLWHALTPQ 167          
The following BLAST results are available for this feature:
BLAST of FC931379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
ISPD_YERPP1.921e-1129.812-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_YERPN1.921e-1129.812-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_YERPG1.921e-1129.812-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_YERPE1.921e-1129.812-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_XANC51.921e-1130.122-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_PSEU21.921e-1133.332-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_AZOPC1.921e-1131.882-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
TARI_BACSU2.509e-1128.48Putative ribitol-5-phosphate cytidylyltransferase ... [more]
ISPD_SYNSC2.509e-1129.302-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_KLEP72.509e-1130.002-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]

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Properties
Property NameValue
Genbank descriptionC34104E04EF PostHarvP1 Citrus clementina cDNA clone C34104E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931379 ID=FC931379; Name=FC931379; organism=Citrus clementina; type=EST; length=750bp
CTGCTTCAGCTGAACCTTGCTCTGTCTTCTTCAACTTCTTCTCTCTCACT
GTTCCCAGACAACCACCAAACTTTCTCCAGAACTGGTCATAAAAATCAGT
TCTTTGGCTTGACAAGGAAGGCCAGGCTTGCAACATCCAGGATTAGATGT
TCTGCTAAAGTTGATAATGGTTCTGTCGTTGTTAAAGATAAGAGTGTATC
AGTTATTCTTTTGGCTGGAGGGAAGGGCAAAAGAATGGGTGCGAACATGC
CAAAGCAGTATCTACCACTTTTGGGTCAACCCATTGCATTGTATAGTTTC
TACACTTTCTCACGCATGGTTGAAGTGAAGGAAATTGTGGTAGTTTGTGA
TCCATCTTACAGTGACATCTTTGAAGAAACCAAAGAGAAGATCAATGTAG
ACCTTAAATTCTCACTTCCGGGGAAGGAGAGGCAAGATTCTGTTTACAGC
GGACTTCAGGAAGTTGATTTTAACTCTGAGCTCGTGTGCATCCATGATTC
TGCTAGACCTTTGGTATTATCTAAAGATGTGCAAAAGGTCCTTATGGATG
CTTTGCGGGTCGGAGCAGCTGTACTTGGTGTTCCTGCCAAAGCTACAATT
AAAGAGGCAAATAGCGAATCTTTTGTGGTTAGAACCCTGGACCGCAAAAC
TCTTTGGGAAATGCAGACCCCTCAGGTGATCAAGCCTGGCTTGCTTAAAA
AGGGTTTGAGCTTGTCATAGGGAAGGTCTTGAAGTACTGATGATGTATCT
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