FC931379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PSEF5 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ispD PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11 Identity = 55/168 (32.74%), Postives = 86/168 (51.19%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVV---VCDPSYSDIFEETKEKIN-VDLKFSLPGKERQDSVYSGLQEVDF----NSELVCIHDSARPLVLSKDVQKVLMDALR--VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 ++ A G G RM A+ PKQYL L G+ I +S F +K +VV V DP + + +I V+ G ER SV + L + + + V +HD+ARP + D+ K+L + + VG +L VPA+ T+K + V+ T+DR +W+ TPQ+ Sbjct: 11 VIPAAGVGARMAADRPKQYLQLGGRTILEHSLGCFLDHPGLKGLVVSLAVDDPYWPALACAHDSRIQRVE-----GGAERSGSVLNALLHLHAQGAADDDWVLVHDAARPNLSRDDLDKLLGELMDDPVGG-LLAVPARDTLKRVDKHGRVLETVDRSLIWQAYTPQM 172
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_METCA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Methylococcus capsulatus GN=ispD PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11 Identity = 52/166 (31.33%), Postives = 88/166 (53.01%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEI--VVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEV---DFNSELVCIHDSARPLVLSKDVQKVLMDALR---VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 ++ A G GKRMGA++PKQYL + G+P+ +T R++ V+ + V+V + + + E + + G+ER DSV S L + + + V +HD+AR V DV++ LM+ L VG +L +P T+K + + + + DR +W TPQ+ Sbjct: 10 VVPAAGVGKRMGADIPKQYLDVAGKPVLQ---HTLERLLSVRRVTAVMVALGANDEFWPELPCSREPRVLATTGGRERADSVLSALTALAGRAADGDWVLVHDAARLCVTRDDVER-LMETLEDDPVG-GILALPVTDTLKTVENGT-IQGSADRSRVWRALTPQM 169
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDF_RHILW (Bifunctional enzyme ispD/ispF OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=ispDF PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11 Identity = 50/163 (30.67%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANM--PKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKI--NVDLKFSLPGKERQDSVYSGLQEV-DFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVL-GVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 +++A G+G+R G++ PKQY + G+P+ +++ F EIVVV P +F I ++ G RQ SV +GL+ + D V IHD+ RP + ++ AVL +P T+K A+S V+ T+ R+ L+ QTPQ Sbjct: 15 VIVAAGRGERAGSSKEGPKQYRMIGGKPVIVHTLENFMTWEPATEIVVVIHPDDEALFARALRHIISATPIETVHGGPTRQQSVLAGLRHLKDKRISHVLIHDAVRPFFDHVLLDRIAESLDNGAQAVLPAIPVTDTLKRADSAGTVLTTVSREHLYAAQTPQ 177
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SHESH (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Shewanella sediminis (strain HAW-EB3) GN=ispD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11 Identity = 48/159 (30.19%), Postives = 77/159 (48.43%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVG-AAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 I+ A G G RMGA +PKQYL + + I + ++ +VV P F+ + L + G ER DSV + L + + + +HD+ARP + D+ K++ R A+L P + T+K N++ V T+ R+ LW TPQ+ Sbjct: 11 IVPAAGIGSRMGAEIPKQYLLIDEKTILQLTLELLLTHPKIDCVVVALHPE-DQFFKGLPLSSHHKLHTVVGGSERADSVLACLNHLGGDCWAM-VHDAARPCLTHGDIDKLIASRQRFPQGAILAAPVRDTMKRGNADGTVKETVCRERLWHALTPQL 167
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SALPB (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=ispD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11 Identity = 49/160 (30.63%), Postives = 79/160 (49.38%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVL--MDALRVGAAVLGVPAKATIKEANS-ESFVVRTLDRKTLWEMQTPQ 675 ++ A G G+RM PKQYL + + I +S + V +V+ P F + + + G ER DSV +GLQ V ++ V +HD+ARP + D+ ++L + RVG +L P + T+K S ++ + T++R LW TPQ Sbjct: 11 VVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPG-DHRFAQLPLANHPQITVVDGGNERADSVLAGLQAV-AEAQWVLVHDAARPCLHQDDLARLLAISENSRVG-GILASPVRDTMKRGESGKNAIAHTVERADLWHALTPQ 167
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PROMP (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ispD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11 Identity = 43/157 (27.39%), Postives = 74/157 (47.13%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ A G G RM A K + L G+ + ++ + V + ++ P ++ + + +K+ G RQ SV++GL + +E V IHD AR LV + K M+ + A +L TIK ++ ++ T +R+ LW QTPQ Sbjct: 4 LIPAAGSGSRMKAGRNKLLIELEGESLIFWTIKSVLSASLVSWVGIIGQPYDKQELLKSVKNFSNKIKWINGGDTRQKSVFNGLNSLPSTAEKVLIHDGARCLVGPDLINKCAMELEQNDAVILATKVTDTIKIVDNRGYIKETPNRQNLWAAQTPQ 160
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDF_BARQU (Bifunctional enzyme ispD/ispF OS=Bartonella quintana GN=ispDF PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11 Identity = 48/159 (30.19%), Postives = 73/159 (45.91%), Query Frame = 1 Query: 208 LLAGGKGKRMGA--NMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVD-FNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 +LA G+GKR G+ PKQY L +P+ ++ F + + I++V P I E+ L G RQ S GL + F + V IHD ARP + +K ++K+ + +P T+K NS V+ T+ L+ QTPQ Sbjct: 1 MLAAGRGKRAGSLQKNPKQYRLLGQKPVICHTVRCFCQHPAITTIILVIHPEDRQICEQAITDFKEHLIIVEGGNTRQISTLRGLHALKKFKPKYVHIHDGARPFIENKLLEKIHTTVNHQEGVLPVLPVSDTLKRVNSTHRVLETIPHTHLYSAQTPQ 159
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDF_AGRRK (Bifunctional enzyme ispD/ispF OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=ispDF PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11 Identity = 49/164 (29.88%), Postives = 86/164 (52.44%), Query Frame = 1 Query: 205 ILLAGGKGKRMGA--NMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKI--NVDLKFSLPGKERQDSVYSGLQEVDFNS-ELVCIHDSARPLVLSKDVQKVLMDALRVGA-AVL-GVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 +++A G+G+R G+ PKQY + G+P+ ++ F + +IV+V + +E I + ++ + G RQ SV +G+++++ V IHD+ RP D+ + AL GA AVL +P T+K A++++ V T+ R L+ QTPQ Sbjct: 15 VIVAAGRGERAGSPEEGPKQYRAIGGRPVIAHTLEKFVTWPQTTKIVIVIHRDDEKLLRSAQETIVDSSGVEIAFGGTTRQQSVLAGVRQLEKTGVSHVMIHDAVRPF-FDHDLLDRVAAALAAGAPAVLPAMPVTDTLKRADTDALVTETVPRAGLYAAQTPQ 177
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SALRD (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=ispD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11 Identity = 51/159 (32.08%), Postives = 79/159 (49.69%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPS-YSDIFEETK-EKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ A G G+R+G PKQ+ L P+ + +F R V VV S +D+ + + E ++V G +RQ SV L+ V V +HD+ARP V + VQ V+ GAA L VP T++ +++ + T+ R L+ MQTPQ Sbjct: 4 LIPAAGGGRRLGGR-PKQFRALGEHPVLVQVLLSFERHPAVGHAVVAAPESRVTDVTDRLQAEGLSVLTAVVGGGADRQSSVQHALRAVPDPVNTVLVHDAARPFVAAAQVQAVVQAVRTGGAASLVVPVADTLRRGDADR-LGETVSRDGLYRMQTPQ 160
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SALAR (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=ispD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11 Identity = 49/160 (30.63%), Postives = 79/160 (49.38%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVL--MDALRVGAAVLGVPAKATIKEAN-SESFVVRTLDRKTLWEMQTPQ 675 ++ A G G+RM PKQYL + + I +S + V +V+V P F + + + G ER DSV +GLQ V ++ V +HD+ARP + D+ ++L + RVG +L P + T+K ++ + T++R LW TPQ Sbjct: 11 VVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIVISPG-DHRFAQLPLANHPQITVVDGGNERADSVMAGLQAV-AQAKWVLVHDAARPCLHQDDLARLLAISENSRVG-GILASPVRDTMKRGEPGKAAIAHTVERADLWHALTPQ 167 The following BLAST results are available for this feature:
BLAST of FC931379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931379 ID=FC931379; Name=FC931379; organism=Citrus clementina; type=EST; length=750bpback to top |