FC931379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PSEAB (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ispD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11 Identity = 52/167 (31.14%), Postives = 83/167 (49.70%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEV----DFNSELVCIHDSARPLVLSKDVQKVLMDALR--VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 ++ A G G RM A+ PKQYL L G+ + + F ++ +VV DP + + + + + G ER DSV SGL + + V +HD+ARP + D+ ++L + VG +L VPA+ T+K A+ + V T+DR +W TPQ+ Sbjct: 12 VIPAAGVGSRMRADRPKQYLDLAGRTVIERTLDCFLEHPMLRGLVVCLAEDDPYWPGLDCAASRHV----QRAAGGVERADSVLSGLLRLLELGAQADDWVLVHDAARPNLTRGDLDRLLEELAEDPVGG-LLAVPARDTLKRADRDGRVSETIDRSVVWLAYTPQM 173
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PASMU (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Pasteurella multocida GN=ispD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11 Identity = 56/165 (33.94%), Postives = 81/165 (49.09%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDF---NSE--LVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ A G G RM + PKQYL + G+ I ++ +++I++ DP S T KI + G R DSV +GL V NSE V +HD+ARP + +D+ K++ + GA +L +PA TIK A + T DR LW QTPQ Sbjct: 15 VVPAAGIGSRMQMDKPKQYLHIHGKTILEHTLSVLLGYPLIEKIILAVAANDPYISTCPLLTHPKIQL----VEGGSSRADSVLNGLNAVKSAVQNSEDFWVMVHDAARPCLTHQDLDKLVQVEDQNGA-ILAIPATDTIKRALHNQQIHYTEDRSQLWLAQTPQ 174
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_BACTN (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Bacteroides thetaiotaomicron GN=ispD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11 Identity = 50/163 (30.67%), Postives = 88/163 (53.99%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEK--INVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIK---EANSESFVVRTLDRKTLWEMQTPQV 678 I++AGGKG RMG+++PKQ+LP+ G+P+ +++ F + + +I++V D +++ E+ +V+ + G+ R SV +GL V LV +HD RP V + +++ A + A + V T++ +A SE T+ R +QTPQV Sbjct: 6 IIVAGGKGLRMGSDLPKQFLPVGGKPVLMHTLEAFRKYDAMLQIILVLPREQQDFWKQLCEEHHFSVEHLVADGGETRFHSVKNGLALVQAPG-LVGVHDGVRPFVTLEVIRRCYELAEQHKAVIPVVDVVETLRHLTDAGSE-----TVSRTEYKLVQTPQV 162
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDL_HUMAN (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase-like protein OS=Homo sapiens PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11 Identity = 49/166 (29.52%), Postives = 82/166 (49.40%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKI-NVDLKFSLPGKERQDSVYSGLQ---EVDFNS-----ELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 +L AGG G+RMG PKQ+ P+L +P+ Y+ R+ +K+IVV ++ + +K + + G R S+++GL+ E NS E+V IHD+ RP V + KV+ A GAA P +T+ +++ + +L+R + PQ Sbjct: 50 VLPAGGCGERMGVPTPKQFCPILERPLISYTLQALERVCWIKDIVVAVTGENMEVMKSIIQKYQHKRISLVEAGVTRHRSIFNGLKALAEDQINSKLSKPEVVIIHDAVRPFVEEGVLLKVVTAAKEHGAAGAIRPLVSTVVSPSADGCLDYSLERARHRASEMPQ 215
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_ROSDO (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=ispD PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11 Identity = 47/157 (29.94%), Postives = 75/157 (47.77%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 +++A G+G R G +PKQ+ L +A S F+ +++++V+V P D +E L + G R SV +GL+ ++ ++ V IHD+ARP V ++ + V+ ALR A A V T DR L+ QTPQ Sbjct: 6 VIVAAGRGVRAGGGIPKQWRALHKGTVAQASIRAFTGHADIRDVVLVLHPDDIDTDLWPREP---GLIVASGGASRSASVLAGLRMLNGKTDAVLIHDAARPCVTTRVIDDVI-SALRTAQAAAPAVAVVDALWTGENGQVTGTADRTGLYRAQTPQ 158
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PSYA2 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=ispD PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11 Identity = 51/198 (25.76%), Postives = 93/198 (46.97%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKE--IVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEV----DFNSELVCIHDSARPLVLSKDVQKVLMDALR-------------------VGAAVLGVPA------------KATIKEANSES---FVVRTLDRKTLWEMQTPQV 678 +++A G+G R GA++PKQY L GQ + +S + + + +VV D S + + + +++ G ER SV +G++ + ++LV IHD+ARP V + D+ V+ A+ + A +L +P + TI E++ ++ + +T+DR +W+ QTPQV Sbjct: 19 MIVAAGRGSRFGASIPKQYTLLQGQTLLQHSVARLAESAYIYQCLLVVAADDSTAQTLS-----FALPIYYAVGGAERWQSVQAGVEAMINAGADEADLVVIHDAARPAVPTHDIDAVIQAAMLEPYGAILATPVADTLKQSYIAANILSMPVHEAVLPHQHTQPELTINESDRDALHAYAQKTIDRSHMWQAQTPQV 211
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_LARHH (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Laribacter hongkongensis (strain HLHK9) GN=ispD PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11 Identity = 50/160 (31.25%), Postives = 81/160 (50.62%), Query Frame = 1 Query: 214 AGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPS--YSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNS-ELVCIHDSARPLVLSKDVQKVLMDALRVG--AAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 A G G RMGA+ PKQYL L G P+ ++ + ++VV P + D F+ ++ + +++ + G R +SV +GL + + V +HD+AR L D L+D L+ +L +P T+K S V +T+ R+ LW QTPQ+ Sbjct: 10 AAGGGSRMGADRPKQYLDLAGAPLLAHTLRRLLAEPRLARVLVVLAPDDVWFDRFDWPRD-VRLEI-LRVGGATRAESVRNGLLHAGAAADDWVLVHDAAR-CCLPPDALDRLIDTLQADPVGGLLALPVADTLKRETSGQRVAQTVSREGLWLAQTPQM 166
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CITK8 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=ispD PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11 Identity = 48/160 (30.00%), Postives = 79/160 (49.38%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKV--LMDALRVGAAVLGVPAKATIKEAN-SESFVVRTLDRKTLWEMQTPQ 675 ++ A G G+RM PKQYL + + I +S + V +V+ P S F E + + G ER DSV +GL+ +++ V +HD+ARP + D+ ++ L + R G +L P + T+K A ++ + T++R LW TPQ Sbjct: 11 VVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDSR-FAELPLAQHPQVTVVDGGDERADSVLAGLRAAG-DAQWVLVHDAARPCLHQDDLARLLSLSETSRTG-GILAAPVRDTMKRAEPGKAAIAHTVERTDLWHALTPQ 167
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDF_RHIL3 (Bifunctional enzyme ispD/ispF OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ispDF PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11 Identity = 52/164 (31.71%), Postives = 85/164 (51.83%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANM--PKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKI--NVDLKFSLPGKERQDSVYSGLQEV-DFNSELVCIHDSARPLVLSKDVQKVLMDALRVGA-AVL-GVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 +++A G+G+R G++ PKQY + G+P+ +++ F EIVVV P +F I ++ G RQ SV +GL+ + D V IHD+ RP + ++ ++L GA AVL +P T+K A++ V+ T+ R+ L+ QTPQ Sbjct: 15 VIVAAGRGERAGSSKEGPKQYRMIGGKPVIVHTLENFMTWEAATEIVVVIHPDDEALFARAFRHIISATPIETVHGGATRQQSVLAGLRYLKDKQISHVLIHDAVRPFFDHALLDRI-AESLDAGAQAVLPAIPVTDTLKRADNAGTVLTTVSREHLYAAQTPQ 177
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDF_NITHX (Bifunctional enzyme ispD/ispF OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=ispDF PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11 Identity = 48/161 (29.81%), Postives = 79/161 (49.07%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLP---GKERQDSVYSGLQEVDFNS-ELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 I++A G+G R G PKQY + G+ + + F +V + V +P +F + ++ P G RQ SV++GL+ + ++ ++V IHD+ARP +++ + GAAV +P TIK+ ++ V T DR L QTPQ Sbjct: 10 IIVAAGRGLRAGTGGPKQYRTIAGRTVIARAMEAFCDHPDVFAVQPVLNPDDLAMFNQAV----AGFRYRPPANGGATRQASVHAGLEALAADAPDIVLIHDAARPFATPALIRRAIEATDITGAAVPVIPVTDTIKQVDASGAVNATPDRAKLRIAQTPQ 166 The following BLAST results are available for this feature:
BLAST of FC931379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931379 ID=FC931379; Name=FC931379; organism=Citrus clementina; type=EST; length=750bpback to top |