FC931379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CLONN (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Clostridium novyi (strain NT) GN=ispD PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.219e-17 Identity = 58/160 (36.25%), Postives = 84/160 (52.50%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPS-YSDIFEETKEKINVDLKFSLP--GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 I++A GKG RM ++ KQ++ L G PI Y+ F + IV+V E +K ++D + GK RQ+SV SGL V +SE+V IHD ARP + + ++ + A GA+ GV K TIK + F TL R+ L+ +QTPQ Sbjct: 7 IVVAAGKGTRMNTDINKQFINLKGNPILYYTLKKFQDNTSIDNIVLVLSKDEIGYCVENVLKKYHLDKVTHIVEGGKTRQESVISGLNAVK-DSEIVLIHDGARPFIEDRIIEDGIKYAKLYGASACGVKVKDTIKVIAEDGFSKDTLKREELFSVQTPQ 165
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_MANSM (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=ispD PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.816e-17 Identity = 53/160 (33.12%), Postives = 89/160 (55.62%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ A G G RM A+ PKQYL LLG+ + ++ +++I++ DP Y D + ++ +K G++R SV++GL+ + V +HD+ARP + +D+ K+L G +L +PA TIK A++E +++T DR LW+ QTPQ Sbjct: 11 VVPAAGVGSRMQADKPKQYLTLLGKTLLEHTLEVLLSYTPIQQIILAVAENDP-YLDQLDVIRQP---KIKIVQGGRDRAGSVFNGLKAITQPHAWVMVHDAARPCLTHEDLDKLLQIEDDNGG-ILAIPAVDTIKRASAEKQIIQTEDRSQLWQAQTPQ 165
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_ANATD (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=ispD PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.902e-17 Identity = 54/158 (34.18%), Postives = 82/158 (51.90%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 IL A GKG R G N PKQ+L L + I YS F + + IV++ + DI K+K + + + G ER D+V GL+ + ++V IHDSARP + + ++K++ D A G+ A T+K + + TL R + +QTPQV Sbjct: 6 ILCAAGKGTRFGGNTPKQFLFLKNKMIIEYSLEVFEKSHFIDGIVLLVPQGFEDIARYLKDKFSKVIFWDYGGNERADTVKRGLEILKGECDIVAIHDSARPFITLELLEKLIADVETHFAVAPGILANDTVKFV-VDGHIQNTLPRSNICLIQTPQV 162
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDF_RHOPB (Bifunctional enzyme ispD/ispF OS=Rhodopseudomonas palustris (strain BisB18) GN=ispDF PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.163e-16 Identity = 56/158 (35.44%), Postives = 86/158 (54.43%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNS-ELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 I++AGG+G R GA PKQY L GQP+ + F E+ + V P +++F+ +N + G RQ SV +GL+ + ++ ++V IHD+ARP V + + + ++ A GAAV + TIK+ N++ VV T DR L QTPQ Sbjct: 10 IIVAGGRGLRAGAGGPKQYRSLAGQPVIFRAMQPFCTHAEIFAVQPVTSPDDAEMFKLAVAGLNYQPP-APGGATRQGSVRAGLEALAADAPDIVLIHDAARPFVDAALISRAIVAAQITGAAVPTIAVTDTIKQINAQGDVVATPDRARLRIAQTPQ 166
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_THEEB (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=ispD PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.518e-16 Identity = 56/159 (35.22%), Postives = 80/159 (50.31%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSL--PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ A G GKRMGA+ K L LLG+P+ ++ + ++ I V+ P I+E E +N+ L G+ RQ SV+ GLQ + +E V IHD AR L + + + VP K TIK N E VV+T +R +LW QTPQ Sbjct: 4 LIPAAGMGKRMGASHNKLRLQLLGKPLLAWTLAAVAAAEAIEWIGVIGQPEDFPIWEALLEDLNLRQPVHLITGGETRQASVFHGLQALPKTAEQVLIHDGARCLATPDLINRCAQALGTYAGLIAAVPVKDTIKIVNREGVVVQTPERDSLWAAQTPQ 162
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PETMO (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=ispD PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.590e-16 Identity = 52/163 (31.90%), Postives = 89/163 (54.60%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS---LPGKERQDSVYSGLQ---EVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 I++A G+GKR G +PKQ++ L + I S F + + +VV +Y D+ T++++ + KF + G RQ+SVY+ L + + + VCIHD+ RP V + + + + A +G AVL A+ TI + N+ +V+TL+R ++ TPQ Sbjct: 5 IIVAAGEGKRAGFEIPKQFVKLNNKTILRMSAEKFQNSASIDKFLVVSHRNYVDL---TEKEVKIFSKFENVVIGGSNRQESVYNALMYLGKKENKPDFVCIHDAVRPFVDTNKIDESIYKAKEIGGAVLAEMAENTISQVNN-GRIVKTLERSQIYLHHTPQ 163
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDF_RHOPS (Bifunctional enzyme ispD/ispF OS=Rhodopseudomonas palustris (strain BisB5) GN=ispDF PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.590e-16 Identity = 56/158 (35.44%), Postives = 83/158 (52.53%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEV-DFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 I++A G+G R GA PKQY L G+P+ + F EV + V +P + IF + +N G RQ SV +GL+ + + N ++V IHD+ARP V + + ++ A + GAA+ V T+K+ N+E V T DR L QTPQ Sbjct: 10 IIVAAGRGLRAGAGGPKQYRTLAGRPVIARALQPFCTHPEVFAVQPVTNPDDTAIFNDAVTGLNFRPAVG-GGATRQGSVRAGLEALAELNPDIVLIHDAARPFVTPDLISRAIVAAGQTGAALPVVAINDTVKQINAEGCVEATPDRARLRIAQTPQ 166
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDF_DESAP (Bifunctional enzyme ispD/ispF OS=Desulforudis audaxviator (strain MP104C) GN=ispDF PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.590e-16 Identity = 59/163 (36.20%), Postives = 82/163 (50.31%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS-----LPGKE-RQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 I++A G+ RMG KQY L G+P+ + F V +V+V P D +E+I F+ +PG E R+DSV++GLQ + LV +HD RP V ++ + V A GAA L VP K T+K V TL R+ LW +QTPQ Sbjct: 7 IVVAAGRSSRMGEGPKKQYRLLAGRPVLGRTLEVFEHAPAVDGVVLVVAPGEEDW---CREEIVTRFGFTKVVAVVPGGEVRRDSVWAGLQALP-PCALVLVHDGVRPFVTARQIAAVAEAARECGAATLAVPPKDTVKLGGPPGAPVSTLPRENLWLVQTPQ 165
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_VIBFM (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Vibrio fischeri (strain MJ11) GN=ispD PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.383e-16 Identity = 58/162 (35.80%), Postives = 85/162 (52.47%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFN--SELVCIHDSARPLVLSKDVQKVLMDAL--RVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 I+ A G G RM A+ PKQYL L G+ + ++ V ++VV E T + N ++ S GKER DSV SGL V + SE V +HD+ARP V D+ K++ + + +G +L P + T+K+A E + T+DR LW TPQ+ Sbjct: 12 IVPAAGVGSRMKADRPKQYLLLNGKTVLEHTIEQLLAFPLVNKVVVAITDGDPYFPELTLAQDNRVIRVS-GGKERADSVLSGLSYVQEHQLSEWVMVHDAARPCVRHSDIDKLITEVIPEHIGG-ILASPVRDTMKQATQEQCIETTIDRSVLWHALTPQL 171
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SHEPA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=ispD PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.383e-16 Identity = 51/158 (32.28%), Postives = 85/158 (53.80%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVG-AAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 I+ A G G RMGA +PKQYL L Q I ++ +++++V +P + F + + L+ + GKER DSV S L ++ + +HD+ARP + +D+ K++ A A+LG P + T+K +N++ + T+ R+ LW TPQ Sbjct: 11 IVPAAGIGSRMGAEIPKQYLQLNEQSILGHTLDCLLSHPSIEKVIVALNPE-DEFFARLPQAQHAKLQAVIGGKERADSVLSALTVAPTDAWAL-VHDAARPCLNHQDIDKLIESASSFPQGAILGAPVRDTMKRSNAQGLITETVCREKLWHALTPQ 166 The following BLAST results are available for this feature:
BLAST of FC931379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931379 ID=FC931379; Name=FC931379; organism=Citrus clementina; type=EST; length=750bpback to top |