FC931379

Overview
NameFC931379
Unique NameFC931379
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_HAEIN (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Haemophilus influenzae GN=ispD PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.383e-16
Identity = 55/159 (34.59%), Postives = 86/159 (54.09%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLP--GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            +L A G G RM A+ PKQYL LLG+ +  ++         V +I++    S  D +  T   +++D K  L   G  R +SV +GL  +   +  V +HD+ARP +   D+ K+L    + GA +L +P   TIK A+++  +V+T DR  LW+  TPQ
Sbjct:    8 VLPAAGVGSRMQADKPKQYLTLLGKTLLEHTLDVMLSYPAVSKIILAV--SKDDPYIST---LSLDPKIQLVEGGTTRAESVLNGLNAIAEKNAWVLVHDAARPCLQHADIDKLLAIEDKQGA-ILAIPVTDTIKRADNQQCIVKTEDRSQLWQAMTPQ 160          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_HAEIG (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Haemophilus influenzae (strain PittGG) GN=ispD PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.383e-16
Identity = 55/159 (34.59%), Postives = 86/159 (54.09%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLP--GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            +L A G G RM A+ PKQYL LLG+ +  ++         V +I++    S  D +  T   +++D K  L   G  R +SV +GL  +   +  V +HD+ARP +   D+ K+L    + GA +L +P   TIK A+++  +V+T DR  LW+  TPQ
Sbjct:    8 VLPAAGVGSRMQADKPKQYLTLLGKTLLEHTLDVMLSYPAVSKIILAV--SKDDPYIST---LSLDPKIQLVEGGTTRAESVLNGLNAIAEKNAWVLVHDAARPCLQHADIDKLLAIEDKQGA-ILAIPVTDTIKRADNQQCIVKTEDRSQLWQAMTPQ 160          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_HAEI8 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Haemophilus influenzae (strain 86-028NP) GN=ispD PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.383e-16
Identity = 55/159 (34.59%), Postives = 86/159 (54.09%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLP--GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            +L A G G RM A+ PKQYL LLG+ +  ++         V +I++    S  D +  T   +++D K  L   G  R +SV +GL  +   +  V +HD+ARP +   D+ K+L    + GA +L +P   TIK A+++  +V+T DR  LW+  TPQ
Sbjct:    8 VLPAAGVGSRMQADKPKQYLTLLGKTLLEHTLDVMLSYPAVSKIILAV--SKDDPYIST---LSLDPKIQLVEGGTTRAESVLNGLNAIAEKNAWVLVHDAARPCLQHADIDKLLAIEDKQGA-ILAIPVTDTIKRADNQQCIVKTEDRSQLWQAMTPQ 160          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_HAEIE (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Haemophilus influenzae (strain PittEE) GN=ispD PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.418e-16
Identity = 55/159 (34.59%), Postives = 86/159 (54.09%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLP--GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            +L A G G RM A+ PKQYL LLG+ +  ++         V +I++    S  D +  T   +++D K  L   G  R +SV +GL  +   +  V +HD+ARP +   D+ K+L    + GA +L +P   TIK A+++  +V+T DR  LW+  TPQ
Sbjct:    8 VLPAAGVGSRMQADKPKQYLTLLGKTLLEHTLDVMLSYPAVSKIILAV--SKDDPYIST---LSLDPKIQLVEGGTTRAESVLNGLNVIAEKNAWVLVHDAARPCLQHADIDKLLAIEDKQGA-ILAIPVTDTIKRADNQQCIVKTEDRSQLWQAMTPQ 160          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD1_LISIN (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1 OS=Listeria innocua GN=ispD1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.418e-16
Identity = 53/160 (33.12%), Postives = 85/160 (53.12%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINV---DLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            I LA G+GKRM A   K +L L+G+PI +++   F       +++VVC  +      +  ++++V    ++    G ERQ SV +GL+     S +V +HD ARP V    + ++L+   +  AA+  V  K T+K       V  T+DR  LW++QTPQ
Sbjct:    6 IFLAAGQGKRMNAEKNKMWLDLVGEPIFIHALRPFLADNRCSKVIVVCQETERKHVRKLMQQLDVAEDRVEVVKGGSERQYSVAAGLECCGLES-VVLVHDGARPFVTLDIIDRLLLGVKQNKAAICAVQVKDTVKRV-IHDVVKETVDRDNLWQIQTPQ 163          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SYNP6 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ispD PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.770e-16
Identity = 51/159 (32.08%), Postives = 79/159 (49.69%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSL--PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            ++ A G G+R GA+  K  LPLLGQP+  ++     +   +  I ++  P      E   +++ +    S    G+ERQ+SV++GL+ +   ++ V IHD AR L       +         A V  VP K TIK+  ++  +  T DR TLW  QTPQ
Sbjct:    4 LIPAAGSGRRFGADRNKLLLPLLGQPVLAWALQAADQAQSITWIGIIGQPGDRADMEALVDQLQLATPVSWIQGGRERQESVFNGLRSLPSGAQQVLIHDGARCLATPTLFDRCSAALQTCPAFVAAVPVKDTIKQVAADGTIAATPDRSTLWAAQTPQ 162          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SYNFM (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=ispD PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.770e-16
Identity = 54/160 (33.75%), Postives = 84/160 (52.50%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKI--NVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678
            I+ A G+G RMG + PKQ+L + G+ I L++    +    + +  ++    + D   E +  +  +  +     G ERQDSV +GL+ +      V IHD  RP V S  ++     A R GAA+  VPA  T+K     + VV TL+R+ +W +QTPQV
Sbjct:    7 IVPAAGRGLRMGRDRPKQFLEIAGRSILLHTLDALAAAPFLAQTYLLVPEDFQD---EARGLVCGHPSVTVVAGGAERQDSVLNGLRSLPDECGWVLIHDGVRPFVSSALLEAAWKTAQRTGAAIAAVPATDTVKRGQGGT-VVETLNREEIWLVQTPQV 162          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SYNE7 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=ispD PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.770e-16
Identity = 51/159 (32.08%), Postives = 79/159 (49.69%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSL--PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            ++ A G G+R GA+  K  LPLLGQP+  ++     +   +  I ++  P      E   +++ +    S    G+ERQ+SV++GL+ +   ++ V IHD AR L       +         A V  VP K TIK+  ++  +  T DR TLW  QTPQ
Sbjct:    4 LIPAAGSGRRFGADRNKLLLPLLGQPVLAWTLQAADQAQSITWIGIIGQPGDRADIEALVDQLQLATPVSWIQGGRERQESVFNGLRSLPSGAQQVLIHDGARCLATPTLFDRCSAALQTCPAFVAAVPVKDTIKQVAADGTIAATPDRSTLWAAQTPQ 162          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_CLOPH (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=ispD PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.770e-16
Identity = 52/159 (32.70%), Postives = 86/159 (54.09%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLP--GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            I+LA G+GKRM +++ KQY+ L  +P+  YS   F   +    IVVV +   S + EE  +         +   G ER  SV +GL ++  +S+ V +HD ARPL+ +  +  V+ +     A ++GV +K T+K +  +  +  T DR  ++ +QTPQ
Sbjct:    7 IVLAAGQGKRMKSSVSKQYMLLKDKPVLYYSLKAFENSLVTDIIVVVGNDEISYVKEEIIKPYGFRKVTHVVEGGSERYLSVLNGLNKIK-DSDYVLVHDGARPLIKTNTINTVISEVEEKKACIVGVASKDTVKISTHDGIIDSTPDRNQVYTIQTPQ 164          
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD1_LISMF (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=ispD1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.770e-16
Identity = 51/160 (31.87%), Postives = 84/160 (52.50%), Query Frame = 1
Query:  205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINV---DLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675
            + LA G+GKRM A   K +L L+G+PI +++   F       +++VV         +E   ++NV    ++    G ERQ SV +GL+       +V +HD ARP +    + ++L+   +  AA+  V  K T+K    +  V  T+DR+ LW++QTPQ
Sbjct:    6 VFLAAGQGKRMNAQKNKMWLELVGEPIFIHALRPFLADNRCSKVIVVSQEEERKHVKELMSQLNVAESRIEIVKGGSERQYSVAAGLERCG-TERVVLVHDGARPFITLDIIDRLLIGVEQSKAAICAVKVKDTVKRV-VKGVVQETVDRENLWQVQTPQ 163          
The following BLAST results are available for this feature:
BLAST of FC931379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
ISPD_HAEIN3.383e-1634.592-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_HAEIG3.383e-1634.592-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_HAEI83.383e-1634.592-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_HAEIE4.418e-1634.592-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD1_LISIN4.418e-1633.132-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_SYNP65.770e-1632.082-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_SYNFM5.770e-1633.752-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_SYNE75.770e-1632.082-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD_CLOPH5.770e-1632.702-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
ISPD1_LISMF5.770e-1631.882-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]

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Properties
Property NameValue
Genbank descriptionC34104E04EF PostHarvP1 Citrus clementina cDNA clone C34104E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931379 ID=FC931379; Name=FC931379; organism=Citrus clementina; type=EST; length=750bp
CTGCTTCAGCTGAACCTTGCTCTGTCTTCTTCAACTTCTTCTCTCTCACT
GTTCCCAGACAACCACCAAACTTTCTCCAGAACTGGTCATAAAAATCAGT
TCTTTGGCTTGACAAGGAAGGCCAGGCTTGCAACATCCAGGATTAGATGT
TCTGCTAAAGTTGATAATGGTTCTGTCGTTGTTAAAGATAAGAGTGTATC
AGTTATTCTTTTGGCTGGAGGGAAGGGCAAAAGAATGGGTGCGAACATGC
CAAAGCAGTATCTACCACTTTTGGGTCAACCCATTGCATTGTATAGTTTC
TACACTTTCTCACGCATGGTTGAAGTGAAGGAAATTGTGGTAGTTTGTGA
TCCATCTTACAGTGACATCTTTGAAGAAACCAAAGAGAAGATCAATGTAG
ACCTTAAATTCTCACTTCCGGGGAAGGAGAGGCAAGATTCTGTTTACAGC
GGACTTCAGGAAGTTGATTTTAACTCTGAGCTCGTGTGCATCCATGATTC
TGCTAGACCTTTGGTATTATCTAAAGATGTGCAAAAGGTCCTTATGGATG
CTTTGCGGGTCGGAGCAGCTGTACTTGGTGTTCCTGCCAAAGCTACAATT
AAAGAGGCAAATAGCGAATCTTTTGTGGTTAGAACCCTGGACCGCAAAAC
TCTTTGGGAAATGCAGACCCCTCAGGTGATCAAGCCTGGCTTGCTTAAAA
AGGGTTTGAGCTTGTCATAGGGAAGGTCTTGAAGTACTGATGATGTATCT
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