FC931379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_TOLAT (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=ispD PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.864e-15 Identity = 57/163 (34.97%), Postives = 89/163 (54.60%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVG--AAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 ++ A G+G RM AN PKQYL L + I ++ ++++IVVV D +S + +I V +L G ER SV +GL V+ ++ V +HD+ARP + D+ LM A +G A+L VP K T+K ++S+ + T++R LW TPQ+ Sbjct: 7 VVPAAGRGSRMQANKPKQYLHLGDKTIIEHTLTRLLAHPQIEKIVVVIADDDHYFSSLPLANHPRIEV----TLGGPERAISVLNGLSSVE--TDWVLVHDAARPCITQSDLD-ALMAAAELGEDGAILAVPVKDTMKRSDSQQRIEETVERGHLWHALTPQM 162
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_SHEHH (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Shewanella halifaxensis (strain HAW-EB4) GN=ispD PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.864e-15 Identity = 49/158 (31.01%), Postives = 84/158 (53.16%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRV-GAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 I+ A G G RMGA +PKQYL L Q I ++ ++ +++V +P+ + F + + + L+ + GKER DSV SGL+ + + +HD+ARP + +D+ K++ A+L P + T+K + + + T+ R+ LW TPQ Sbjct: 11 IVPAAGIGSRMGAEIPKQYLQLNEQSILSHTLDCLLSHPDIDKVIVALNPA-DNYFAKLPQVKHPKLECVIGGKERADSVLSGLKIAEAGA-WALVHDAARPCLTHRDIDKLIASVNEFPQGAILAAPVRDTMKRTDEKGLISETVCRERLWHALTPQ 166
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDF_PARL1 (Bifunctional enzyme ispD/ispF OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=ispDF PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.864e-15 Identity = 50/158 (31.65%), Postives = 79/158 (50.00%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNS-ELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 +++A G+G R G PKQY L GQP+ + F+ E+ ++ V P + FE + L+ G RQDSV +GL+ ++ ++ +LV IHD ARPL+ + + + A G+ TI+ + + T+ R TLW QTPQ Sbjct: 6 LIVAAGRGSRAGPGAPKQYRLLAGQPVLRRTLAAFANHPEIMTVLTVIHPEDASAFEAASGGLPKLLEPVFGGSTRQDSVRAGLEALNADAPDLVLIHDGARPLISAPVISACIAALSTHEGAQAGLSLTDTIRRTD-KGMAAETVARDTLWRAQTPQ 162
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PSEP1 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ispD PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.740e-15 Identity = 58/167 (34.73%), Postives = 89/167 (53.29%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDF----NSELVCIHDSARPLVLSKDVQKVLMDALR--VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 ++ A G G RM A+ PKQYL L GQ + +S F +K +VV DP + + + +I + G+ER DSV + L + +S+ V +HD+ARP + D+ K+L + VG +L VPA+ T+K A+S V T+DR T+W+ TPQ+ Sbjct: 11 VIPAAGVGARMAADRPKQYLELAGQTLLEHSLDCFLGHPALKGVVVSIAEDDPYWPGLRYASDPRIQC----AAGGRERADSVLNALLVLHAQGAGDSDWVLVHDAARPNLARSDLDKLLSELADDPVGG-LLAVPARDTLKRADSHGRVSATVDRSTIWQAYTPQM 172
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_AZOSE (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Azoarcus sp. (strain EbN1) GN=ispD PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.740e-15 Identity = 55/164 (33.54%), Postives = 84/164 (51.22%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL-KFSLPGKERQDSVYSGLQEVDFN---SELVCIHDSARPLVLSKDVQKVLMDALR--VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 I+ A G G RM + PKQYLPLLG+P+ +S +V ++ VV ++ + L G R DSV +GL+ V S+ V +HD+ARP + ++K+ + R VG +L VP T+K A+ V+ T+ R+ LW+ QTPQ+ Sbjct: 11 IVPAAGSGSRMATSRPKQYLPLLGKPLIFHSLAVLCAAPDVDKVFVVLSVEDAEWRRHDWSVLGPKLVPLFCGGGTRADSVLAGLRAVADEIEPSDWVLVHDAARPCLAPWHIEKLARELARDEVG-GLLAVPVADTLKRADEHRQVLATVPRENLWQAQTPQM 173
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_ACTP7 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=ispD PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.740e-15 Identity = 55/160 (34.38%), Postives = 85/160 (53.12%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVV---CDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 ++ A G G RM A +PKQYL L + I ++ F ++++IVV DP Y + KI + G+ R SV++ LQ ++ +S V +HD+ARP + D+ K+L + G A+L PA T+K A+ + ++ T DR TLW TPQ Sbjct: 8 VIPASGVGSRMQAGLPKQYLKLQNKTILEHTLEIFLAHPDIEKIVVAVAETDPFYPQVALLDSPKIQI----VFGGETRAHSVFNALQVIEDDS-WVLVHDAARPCLKRSDLDKLLQSDAKHG-AILATPAIDTMKRADGDK-IMHTEDRSTLWHALTPQ 160
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDF_RHORT (Bifunctional enzyme ispD/ispF OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=ispDF PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.740e-15 Identity = 51/158 (32.28%), Postives = 80/158 (50.63%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEV-DFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 +++A G+GKR G ++PKQY L G+PI ++ F+ +V + + P D++ + L G ERQDSV GL+ + D + V IHD ARPLV + +V+ A+ + T+K + + +T+DR LW QTPQ Sbjct: 7 LIVAAGRGKRFGGDLPKQYQTLGGRPILRHTLARFAAHPDVALVRAIIHPEDRDLYGAAAHGLATLLDAVEGGAERQDSVRLGLESLTDVAPDYVLIHDGARPLVDGALIDRVIAALADHPGAIPALAVADTLKR-GAGGMIGQTVDRAGLWRAQTPQ 163
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDF_BRASB (Bifunctional enzyme ispD/ispF OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=ispDF PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.740e-15 Identity = 53/158 (33.54%), Postives = 81/158 (51.27%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQE-VDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 IL+A G+G R G PKQY + G+ + + FS +V + V +P D+F + ++ + G RQ SV +GL+ V ++V IHD+ARP V S + + + A + GAA+ VP TIKE + ++ T +R L QTPQ Sbjct: 10 ILVAAGRGLRAGTGGPKQYRAIGGRTVIHRALAAFSEHPDVAVVQPVVNPDDIDVFNAAVSGLRHEVP-AHGGATRQASVLAGLEALVPHRPDIVLIHDAARPFVTSAVISRAIQAAGKTGAAIPVVPVTDTIKEVTASGDIIATPERAKLRIAQTPQ 166
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPD_PSEPK (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Pseudomonas putida (strain KT2440) GN=ispD PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.884e-15 Identity = 58/167 (34.73%), Postives = 90/167 (53.89%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDF----NSELVCIHDSARPLVLSKDVQKVLMDALR--VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 678 ++ A G G RM A+ PKQYL L GQ + +S F +K +VV DP + + + +I+ + G+ER DSV + L + +S+ V +HD+ARP + D+ K+L + VG +L VPA+ T+K A+S V T+DR T+W+ TPQ+ Sbjct: 11 VIPAAGVGARMAADRPKQYLELAGQTLLEHSLDCFLGHPALKGVVVSIAEDDPYWPGLRCASDPRIHC----AAGGRERADSVLNALLVLHAQGAADSDWVLVHDAARPNLARSDLDKLLSELADDPVGG-LLAVPARDTLKRADSHGRVSATVDRSTIWQAYTPQM 172
BLAST of FC931379 vs. ExPASy Swiss-Prot
Match: ISPDF_BRAJA (Bifunctional enzyme ispD/ispF OS=Bradyrhizobium japonicum GN=ispDF PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.884e-15 Identity = 59/161 (36.65%), Postives = 80/161 (49.69%), Query Frame = 1 Query: 205 ILLAGGKGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLP---GKERQDSVYSGLQEV-DFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ 675 +L+A G+G R GA PKQY + GQP+ + FSR +V + V +P S +F LK P G RQ SV +GL+ + ++V IHD+ARP V + + + A R GAA+ VP TIK + V T DR L QTPQ Sbjct: 10 VLVAAGRGLRAGAGGPKQYREIGGQPVIYRAMEAFSRHPDVFAVQPVVNPDDSAMFTAAV----AGLKHEPPTNGGATRQASVLAGLEALAKHQPDIVLIHDAARPFVSDGVISRAIDAASRTGAAIPVVPVTDTIKLTGASGNVEDTPDRARLRIAQTPQ 166 The following BLAST results are available for this feature:
BLAST of FC931379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931379 ID=FC931379; Name=FC931379; organism=Citrus clementina; type=EST; length=750bpback to top |