FC931380

Overview
NameFC931380
Unique NameFC931380
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length567
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP7C_PONAB (Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 6.139e-58
Identity = 112/142 (78.87%), Postives = 122/142 (85.92%), Query Frame = 1
Query:  142 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRF DA VQSD K WPF V+  AG +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG TV NAV
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGETKSFYPEEVSSMVLAKMKEIAEAYLGKTVTNAV 143          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP7C_MOUSE (Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 6.139e-58
Identity = 112/142 (78.87%), Postives = 122/142 (85.92%), Query Frame = 1
Query:  142 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRF DA VQSD K WPF V+  AG +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG TV NAV
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAV 143          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 6.139e-58
Identity = 112/142 (78.87%), Postives = 122/142 (85.92%), Query Frame = 1
Query:  142 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRF DA VQSD K WPF V+  AG +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG TV NAV
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAV 143          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 6.139e-58
Identity = 112/142 (78.87%), Postives = 122/142 (85.92%), Query Frame = 1
Query:  142 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRF DA VQSD K WPF V+  AG +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG TV NAV
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAV 143          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 6.139e-58
Identity = 112/142 (78.87%), Postives = 122/142 (85.92%), Query Frame = 1
Query:  142 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRF DA VQSD K WPF V+  AG +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG TV NAV
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGEAKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAV 143          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 6.139e-58
Identity = 112/142 (78.87%), Postives = 122/142 (85.92%), Query Frame = 1
Query:  142 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRF DA VQSD K WPF V+  AG +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG TV NAV
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAV 143          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP70_LEIMA (Heat shock 70 kDa protein (Fragment) OS=Leishmania major GN=HSP70 PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 8.018e-58
Identity = 110/139 (79.14%), Postives = 121/139 (87.05%), Query Frame = 1
Query:  151 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            AIGIDLGTTYSCVGVWQ++R++IIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D+ VQSD K WPFKV     DKP+I V Y+GEEK F  EEISSMVL+KM+E AEAYLG  VK AV
Sbjct:    6 AIGIDLGTTYSCVGVWQNERLDIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDSVVQSDMKHWPFKVTTKGDDKPVISVQYRGEEKTFTPEEISSMVLLKMKETAEAYLGKQVKKAV 144          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.047e-57
Identity = 112/142 (78.87%), Postives = 122/142 (85.92%), Query Frame = 1
Query:  142 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D+ VQSD K WPF V+  AG +P + V YKGE K F  EEISSMVL KM+EIAEAYLG TV NAV
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDSVVQSDMKHWPFTVVNDAG-RPKVQVEYKGETKSFYPEEISSMVLTKMKEIAEAYLGKTVTNAV 143          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.047e-57
Identity = 111/142 (78.17%), Postives = 123/142 (86.62%), Query Frame = 1
Query:  142 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            +GP+IGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQ+D K WPFKV++  G KP + V YKGE K F  EEISSMVL+KMREIAEAYLG  V NAV
Sbjct:    5 KGPSIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTVFDAKRLIGRKFNDQVVQADMKHWPFKVVSDGG-KPKVQVDYKGENKSFNPEEISSMVLVKMREIAEAYLGQKVSNAV 145          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 1.368e-57
Identity = 109/139 (78.42%), Postives = 121/139 (87.05%), Query Frame = 1
Query:  151 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            AIGIDLGTTYSCVGVWQ++RVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNP NTVFDAKRLIGR+FSD+ VQSD K WPFKV+    DKP+I V ++GE K F  EEISSMVL+KM+E+AE+YLG  V  AV
Sbjct:    6 AIGIDLGTTYSCVGVWQNERVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFSDSVVQSDMKHWPFKVVTKGDDKPVIQVQFRGETKTFNPEEISSMVLLKMKEVAESYLGKQVAKAV 144          
The following BLAST results are available for this feature:
BLAST of FC931380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_PONAB6.139e-5878.87Heat shock cognate 71 kDa protein OS=Pongo abelii ... [more]
HSP7C_MOUSE6.139e-5878.87Heat shock cognate 71 kDa protein OS=Mus musculus ... [more]
HSP7C_HUMAN6.139e-5878.87Heat shock cognate 71 kDa protein OS=Homo sapiens ... [more]
HSP7C_HORSE6.139e-5878.87Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_CRIGR6.139e-5878.87Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP7C_BOVIN6.139e-5878.87Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP70_LEIMA8.018e-5879.14Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HSP7C_CHICK1.047e-5778.87Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HSP70_ONCTS1.047e-5778.17Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HSP74_TRYBB1.368e-5778.42Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]

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Properties
Property NameValue
Genbank descriptionC34104E05EF PostHarvP1 Citrus clementina cDNA clone C34104E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931380 ID=FC931380; Name=FC931380; organism=Citrus clementina; type=EST; length=567bp
GACTTGAAACCCTAGCTCTCTGTAGTTTTCTGTTTTCTAGATTTGCTTTT
TTTGTTTTTTTGTTTTTTTGTTTTCGCCCTCCTTTGAATTCTTCTTCGTC
GACATAACAAAGAGAAAGCTGTAGGCATGGCTGGTAAAGGAGAAGGTCCA
GCAATCGGCATTGACTTGGGCACGACTTACTCGTGCGTTGGTGTGTGGCA
ACACGACCGTGTCGAGATCATCGCTAATGATCAAGGTAACAGAACGACAC
CGTCTTACGTTGCCTTTACCGATTCTGAGCGTTTGATTGGTGATGCCGCT
AAGAACCAGGTCGCCATGAATCCTATCAATACCGTCTTTGATGCAAAGAG
GTTGATTGGTCGTAGATTCAGTGACGCAACTGTCCAGAGTGACACTAAGT
TGTGGCCATTCAAGGTTATAGCTGGTGCTGGTGATAAGCCTATGATTGTG
GTCACATACAAGGGTGAAGAGAAACAATTCGCTGCAGAAGAGATCTCTTC
CATGGTTCTCATTAAGATGCGTGAAATTGCTGAGGCCTACCTGGGATCTA
CAGTCAAGAATGCAGTG
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