FC931380

Overview
NameFC931380
Unique NameFC931380
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length567
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 8.865e-57
Identity = 109/140 (77.86%), Postives = 125/140 (89.29%), Query Frame = 1
Query:  148 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            PA+GIDLGTTYSCVG+++ DR+EIIANDQGNRTTPS+VAFTD+ERLIGDAAKNQVAMNPINTVFDAKRLIGR+F+DA VQ+D K +PFKV+  +G KP++ V +KGEEKQF  EEISSMVL KMRE AEAYLG TV NAV
Sbjct:    3 PAVGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRKFNDAEVQADMKHFPFKVVEKSG-KPIVQVEFKGEEKQFTPEEISSMVLTKMRETAEAYLGGTVNNAV 141          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 8.865e-57
Identity = 111/142 (78.17%), Postives = 124/142 (87.32%), Query Frame = 1
Query:  142 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            +G AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQSD KLWPF+VI   G KP ++V+YKGE+K F  EEISSMVL KM+E AEA+LG TV NAV
Sbjct:    5 KGTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVI-NEGGKPKVMVSYKGEKKAFYPEEISSMVLTKMKETAEAFLGYTVTNAV 145          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 8.865e-57
Identity = 111/142 (78.17%), Postives = 124/142 (87.32%), Query Frame = 1
Query:  142 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            +G AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQSD KLWPF+VI   G KP ++V+YKGE+K F  EEISSMVL KM+E AEA+LG TV NAV
Sbjct:    5 KGTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVI-NEGGKPKVMVSYKGEKKAFYPEEISSMVLTKMKETAEAFLGYTVTNAV 145          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.158e-56
Identity = 112/140 (80.00%), Postives = 120/140 (85.71%), Query Frame = 1
Query:  148 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFT+SERLIGDAAKNQVAMNP NT+FDAKRLIGRRF DATVQSD K WPF+V A  G KP I V YKGE K F  EE+SSMVL KMRE AEAYLG TV +AV
Sbjct:    5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTESERLIGDAAKNQVAMNPNNTIFDAKRLIGRRFDDATVQSDMKHWPFEVFAENG-KPRIRVEYKGERKSFYPEEVSSMVLTKMRETAEAYLGGTVTDAV 143          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 1.512e-56
Identity = 111/142 (78.17%), Postives = 125/142 (88.03%), Query Frame = 1
Query:  142 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            +G AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQSD KLWPF+VI  AG KP ++V+YKGE+K F  EEISSMVL KM+E AEA+LG +V NAV
Sbjct:    5 KGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEAG-KPKVLVSYKGEKKAFYPEEISSMVLTKMKETAEAFLGHSVTNAV 145          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 1.975e-56
Identity = 108/139 (77.70%), Postives = 120/139 (86.33%), Query Frame = 1
Query:  151 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            A+GIDLGTTYSCVGV+ H +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F D  VQSD K WPFKVI+  G KP + V YKGE K F  EEISSMVL+KM+E AEA+LG+TVK+AV
Sbjct:    6 AVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISSMVLLKMKETAEAFLGTTVKDAV 144          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HS71L_MOUSE (Heat shock 70 kDa protein 1-like OS=Mus musculus GN=Hspa1l PE=2 SV=4)

HSP 1 Score: 218.394 bits (555), Expect = 1.975e-56
Identity = 111/142 (78.17%), Postives = 124/142 (87.32%), Query Frame = 1
Query:  142 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            +G AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQSD KLWPF+VI  AG KP ++V+YKGE+K F  EEISSMVL KM+E AEA+LG  V NAV
Sbjct:    5 KGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEAG-KPKVMVSYKGEKKAFYPEEISSMVLTKMKETAEAFLGHNVTNAV 145          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.369e-56
Identity = 110/140 (78.57%), Postives = 120/140 (85.71%), Query Frame = 1
Query:  151 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAG-DKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            +IGIDLGTTYSCVGVW +DRVEIIANDQGNRTTPSYVAF D+ERLIGDAAKNQVAMNPINTVFDAKRLIGR+FSD+ VQSD K WPFKVI     DKP+I V +KGE K F+ EEISSMVL KM+E AE+YLG  V NAV
Sbjct:    3 SIGIDLGTTYSCVGVWLNDRVEIIANDQGNRTTPSYVAFNDTERLIGDAAKNQVAMNPINTVFDAKRLIGRKFSDSVVQSDMKHWPFKVITNKNDDKPLIQVDFKGETKTFSPEEISSMVLSKMKETAESYLGKPVNNAV 142          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 217.238 bits (552), Expect = 4.400e-56
Identity = 109/142 (76.76%), Postives = 121/142 (85.21%), Query Frame = 1
Query:  142 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            + PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP  T+FDAKRLIGR+F DA VQSD K WPF+V++  G KP I VTYK E+K F  EEISSMVL KM+E AEAYLG TV NAV
Sbjct:    3 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQTIFDAKRLIGRKFDDAAVQSDMKHWPFEVVSADG-KPKIEVTYKDEKKTFFPEEISSMVLTKMKETAEAYLGKTVTNAV 143          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 4.400e-56
Identity = 111/140 (79.29%), Postives = 123/140 (87.86%), Query Frame = 1
Query:  148 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            PAIGIDLGTTYSCVG+++ DR+EIIANDQGNRTTPS+VAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQSD K +PFKVI  AG KP+I V +KGEEKQF  EEISSMVL KMRE AE+YLG TV NAV
Sbjct:    3 PAIGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPSNTVFDAKRLIGRKFADPEVQSDMKHFPFKVIDKAG-KPVISVEFKGEEKQFTPEEISSMVLTKMRETAESYLGGTVNNAV 141          
The following BLAST results are available for this feature:
BLAST of FC931380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_TRIRU8.865e-5777.86Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
HS71L_PIG8.865e-5778.17Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HS71L_BOVIN8.865e-5778.17Heat shock 70 kDa protein 1-like OS=Bos taurus GN=... [more]
HSP7A_DROME1.158e-5680.00Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]
HS71L_RAT1.512e-5678.17Heat shock 70 kDa protein 1-like OS=Rattus norvegi... [more]
HSP7A_CAEEL1.975e-5677.70Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HS71L_MOUSE1.975e-5678.17Heat shock 70 kDa protein 1-like OS=Mus musculus G... [more]
HS7C3_DICDI3.369e-5678.57Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
HSP7D_DROME4.400e-5676.76Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP72_PARBA4.400e-5679.29Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]

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Properties
Property NameValue
Genbank descriptionC34104E05EF PostHarvP1 Citrus clementina cDNA clone C34104E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931380 ID=FC931380; Name=FC931380; organism=Citrus clementina; type=EST; length=567bp
GACTTGAAACCCTAGCTCTCTGTAGTTTTCTGTTTTCTAGATTTGCTTTT
TTTGTTTTTTTGTTTTTTTGTTTTCGCCCTCCTTTGAATTCTTCTTCGTC
GACATAACAAAGAGAAAGCTGTAGGCATGGCTGGTAAAGGAGAAGGTCCA
GCAATCGGCATTGACTTGGGCACGACTTACTCGTGCGTTGGTGTGTGGCA
ACACGACCGTGTCGAGATCATCGCTAATGATCAAGGTAACAGAACGACAC
CGTCTTACGTTGCCTTTACCGATTCTGAGCGTTTGATTGGTGATGCCGCT
AAGAACCAGGTCGCCATGAATCCTATCAATACCGTCTTTGATGCAAAGAG
GTTGATTGGTCGTAGATTCAGTGACGCAACTGTCCAGAGTGACACTAAGT
TGTGGCCATTCAAGGTTATAGCTGGTGCTGGTGATAAGCCTATGATTGTG
GTCACATACAAGGGTGAAGAGAAACAATTCGCTGCAGAAGAGATCTCTTC
CATGGTTCTCATTAAGATGCGTGAAATTGCTGAGGCCTACCTGGGATCTA
CAGTCAAGAATGCAGTG
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