FC931380

Overview
NameFC931380
Unique NameFC931380
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length567
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: DNAK_XANC5 (Chaperone protein dnaK OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.245e-25
Identity = 63/142 (44.37%), Postives = 86/142 (60.56%), Query Frame = 1
Query:  145 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            G  IGIDLGTT SCV +    +  +I N +G+RTTPS VA+T D E L+G +AK Q   NP NT +  KRLIGR+F+D  VQ D    P+ ++A       +  +   + K+ A +EIS+ VL KM++ AE +LG  V  AV
Sbjct:    2 GKIIGIDLGTTNSCVSIMDGGKARVIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDGEVQKDISHVPYGILAHDNGDAWVQTS---DAKRMAPQEISARVLEKMKKTAEDFLGEKVTEAV 140          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: DNAK_VEREI (Chaperone protein dnaK OS=Verminephrobacter eiseniae (strain EF01-2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.245e-25
Identity = 62/142 (43.66%), Postives = 87/142 (61.27%), Query Frame = 1
Query:  145 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            G  IGIDLGTT SCV + + +   +I N +G RTTPS VA+  D E L+G +AK Q   NP NT++  KRLIGR+F++  VQ D  L P+K++A       I V       + +A+++S+ +L KM++ AE YLG  V  AV
Sbjct:    2 GRIIGIDLGTTNSCVSIMEGNTTRVIENSEGARTTPSIVAYQEDGEILVGASAKRQAVTNPKNTLYAVKRLIGRKFTEKEVQKDIDLMPYKIVAAENGDAWIEV----RGTKLSAQQVSADILRKMKKTAEDYLGEPVTEAV 139          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: DNAK_PSEMY (Chaperone protein dnaK OS=Pseudomonas mendocina (strain ymp) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.245e-25
Identity = 61/142 (42.96%), Postives = 88/142 (61.97%), Query Frame = 1
Query:  145 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            G  IGIDLGTT SCV + ++  V+++ N +G RTTPS +A+  D E L+G +AK Q   NP NT++  KRLIGRRF +  VQ D ++ P+K++    +   + V      ++ A  +IS+ VL KM++ AE YLG  V  AV
Sbjct:    2 GKIIGIDLGTTNSCVSILENGNVKVLENAEGARTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLYAVKRLIGRRFDEDVVQKDIQMVPYKIVKADNNDAWVEV----NGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAV 139          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: DNAK_PELPB (Chaperone protein dnaK OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.245e-25
Identity = 61/142 (42.96%), Postives = 89/142 (62.68%), Query Frame = 1
Query:  145 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDS-ERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            G  IGIDLGTT SCV V Q  +  +I N +GNRTTPS +A T + +RL+G AAK Q   NP NT+F  KR +GR++ +  +  + KL P+++I   G+        K  +K ++ +E+S+M+L KM++ AE +LG  V  AV
Sbjct:    2 GKIIGIDLGTTNSCVSVMQGSQPTVIENSEGNRTTPSIIALTKTGDRLVGQAAKRQAITNPKNTIFSIKRFMGRKYDE--INDEKKLAPYEIINEGGE-----ARVKINDKIYSPQEVSAMILQKMKQTAEDFLGEKVTEAV 136          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: DNAK_BURXL (Chaperone protein dnaK OS=Burkholderia xenovorans (strain LB400) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.245e-25
Identity = 64/142 (45.07%), Postives = 86/142 (60.56%), Query Frame = 1
Query:  145 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            G  IGIDLGTT SCV + + + V++I N +G RTTPS +A+  D E L+G  AK Q   NP NT++  KRLIGRRF +  VQ D  L P+K+I        + V     +++ A  +IS+ VL KM++ AE YLG  V  AV
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGNSVKVIENSEGARTTPSIIAYMEDGEILVGAPAKRQSVTNPKNTLYAVKRLIGRRFEEKEVQKDIGLMPYKIIKADNGDAWVEV----RDQKLAPPQISAEVLRKMKKTAEDYLGEPVTEAV 139          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: DNAK_AERHH (Chaperone protein dnaK OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.245e-25
Identity = 67/142 (47.18%), Postives = 84/142 (59.15%), Query Frame = 1
Query:  145 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDS-ERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            G  IGIDLGTT SCV +   D   +I N +G+RTTPS +A+ D  E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D ++ P+ +     D     V  KG  K+ A  +IS+ VL KM++ AE YLG  V  AV
Sbjct:    2 GKIIGIDLGTTNSCVAILDGDHARVIENAEGDRTTPSIIAYADDGEILVGQPAKRQAITNPKNTLFAIKRLIGRRFEDDEVQRDLEIMPYAI--AKADNGDAWVEVKG--KKMAPPQISAEVLKKMKKTAEDYLGEPVTEAV 139          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: DNAK2_COLP3 (Chaperone protein dnaK 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.245e-25
Identity = 66/142 (46.48%), Postives = 85/142 (59.86%), Query Frame = 1
Query:  145 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            G  IGIDLGTT SCV V   D V +I N +G+RTTPS + +T + E L+G  AK Q   NP NT++  KRLIGRRF D   Q D  + PF ++    D     V  KGE  + A  ++S+ VL KM++ AE +LG TV  AV
Sbjct:    2 GKIIGIDLGTTNSCVAVLDGDSVRVIENAEGDRTTPSIIGYTAEGETLVGQPAKRQSVTNPENTLYAIKRLIGRRFEDKETQRDIDIMPFGIV--KADNGDAWVQVKGE--KIAPPQVSAEVLKKMKKTAEDFLGETVTEAV 139          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: DNAK_XANAC (Chaperone protein dnaK OS=Xanthomonas axonopodis pv. citri GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.851e-25
Identity = 63/142 (44.37%), Postives = 86/142 (60.56%), Query Frame = 1
Query:  145 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            G  IGIDLGTT SCV +    +  +I N +G+RTTPS VA+T D E L+G +AK Q   NP NT +  KRLIGR+F+D  VQ D    P+ ++A       +  +   + K+ A +EIS+ VL KM++ AE +LG  V  AV
Sbjct:    2 GKIIGIDLGTTNSCVSIMDGGKARVIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFYAVKRLIGRKFTDGEVQKDISHVPYGILAHDNGDAWVQTS---DGKRMAPQEISARVLEKMKKTAEDFLGEKVTEAV 140          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: DNAK_RUTMC (Chaperone protein dnaK OS=Ruthia magnifica subsp. Calyptogena magnifica GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.851e-25
Identity = 69/140 (49.29%), Postives = 87/140 (62.14%), Query Frame = 1
Query:  154 IGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DSER-LIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            IGIDLGTT SCV +     V+II N +G+RTTPS +A+  DSE  L+G  AK Q   NP NT++  KRLIGRRF +  VQ D  L P+K++    D     V  KG  K+ AA EIS+ V+ KM++ AE YLG  V  AV
Sbjct:    5 IGIDLGTTNSCVAIMDGGNVKIIENSEGDRTTPSIIAYPKDSEEVLVGQPAKRQAVTNPENTLYAIKRLIGRRFDEDAVQKDINLVPYKIV--KVDNGDAWVEVKG--KKMAAPEISAKVIGKMKKTAEDYLGEEVTEAV 140          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: DNAK_RHOFD (Chaperone protein dnaK OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.851e-25
Identity = 62/142 (43.66%), Postives = 87/142 (61.27%), Query Frame = 1
Query:  145 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            G  IGIDLGTT SCV + + +  ++I N +G RTTPS +A+  D E L+G +AK Q   NP NT++  KRLIGR+F++  VQ D  L P+K+ A       + V       + A +++S+ VL KM++ AE YLG TV  AV
Sbjct:    2 GRIIGIDLGTTNSCVAIMEGNTPKVIENSEGARTTPSIIAYQEDGEVLVGASAKRQAVTNPKNTLYAVKRLIGRKFTEKEVQKDINLMPYKIAAADNGDAWVEV----RGNRMAPQQVSADVLRKMKKTAEDYLGETVTEAV 139          
The following BLAST results are available for this feature:
BLAST of FC931380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_XANC55.245e-2544.37Chaperone protein dnaK OS=Xanthomonas campestris p... [more]
DNAK_VEREI5.245e-2543.66Chaperone protein dnaK OS=Verminephrobacter eiseni... [more]
DNAK_PSEMY5.245e-2542.96Chaperone protein dnaK OS=Pseudomonas mendocina (s... [more]
DNAK_PELPB5.245e-2542.96Chaperone protein dnaK OS=Pelodictyon phaeoclathra... [more]
DNAK_BURXL5.245e-2545.07Chaperone protein dnaK OS=Burkholderia xenovorans ... [more]
DNAK_AERHH5.245e-2547.18Chaperone protein dnaK OS=Aeromonas hydrophila sub... [more]
DNAK2_COLP35.245e-2546.48Chaperone protein dnaK 2 OS=Colwellia psychrerythr... [more]
DNAK_XANAC6.851e-2544.37Chaperone protein dnaK OS=Xanthomonas axonopodis p... [more]
DNAK_RUTMC6.851e-2549.29Chaperone protein dnaK OS=Ruthia magnifica subsp. ... [more]
DNAK_RHOFD6.851e-2543.66Chaperone protein dnaK OS=Rhodoferax ferrireducens... [more]

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Properties
Property NameValue
Genbank descriptionC34104E05EF PostHarvP1 Citrus clementina cDNA clone C34104E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931380 ID=FC931380; Name=FC931380; organism=Citrus clementina; type=EST; length=567bp
GACTTGAAACCCTAGCTCTCTGTAGTTTTCTGTTTTCTAGATTTGCTTTT
TTTGTTTTTTTGTTTTTTTGTTTTCGCCCTCCTTTGAATTCTTCTTCGTC
GACATAACAAAGAGAAAGCTGTAGGCATGGCTGGTAAAGGAGAAGGTCCA
GCAATCGGCATTGACTTGGGCACGACTTACTCGTGCGTTGGTGTGTGGCA
ACACGACCGTGTCGAGATCATCGCTAATGATCAAGGTAACAGAACGACAC
CGTCTTACGTTGCCTTTACCGATTCTGAGCGTTTGATTGGTGATGCCGCT
AAGAACCAGGTCGCCATGAATCCTATCAATACCGTCTTTGATGCAAAGAG
GTTGATTGGTCGTAGATTCAGTGACGCAACTGTCCAGAGTGACACTAAGT
TGTGGCCATTCAAGGTTATAGCTGGTGCTGGTGATAAGCCTATGATTGTG
GTCACATACAAGGGTGAAGAGAAACAATTCGCTGCAGAAGAGATCTCTTC
CATGGTTCTCATTAAGATGCGTGAAATTGCTGAGGCCTACCTGGGATCTA
CAGTCAAGAATGCAGTG
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