FC931381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_SYNP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dxs PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.768e-41 Identity = 92/200 (46.00%), Postives = 125/200 (62.50%), Query Frame = 2 Query: 32 KLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPAD 628 KLPV F +DRAG+VGADGPTH G +DI ++ +PN+V+MAP DEAEL M+ T D R+PRG+GIGA L + PL IGKG IL GD + ++GYG++V + A +L IS TV +ARF KPLD++LI LA + + T EEG +GGFGS VC L +L + ++ + D +DH +PA+ Sbjct: 411 KLPVFFCLDRAGIVGADGPTHQGMYDIAYLRLIPNIVLMAPKDEAELQRMLVTGIEYTDGAIAMRYPRGSGIGAPLMEDG-WEPLPIGKGEILRNGDDILLIGYGAMVHSTLQVAEILSEHGISATVINARFVKPLDSELIAPLAKQIGKVATFEEGCLMGGFGSAVCEALQDHDVL---VPVKRFGIGDVLVDHATPAE 606
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_SHESA (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sp. (strain ANA-3) GN=dxs PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.309e-41 Identity = 94/200 (47.00%), Postives = 125/200 (62.50%), Query Frame = 2 Query: 32 KLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPAD 628 +LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T D PS R+PRG+ GA T L IGKG I G +A+L +G+ LAA + ++ + TV D RF KPLD DL++++A H++L+TVEE ++ GG GS V L L L P + + LPD +I HGSP + Sbjct: 411 RLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATGAT--QVEAMTALPIGKGVIKRLGKGIAMLNFGT-----TLAAALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHDVLVTVEENAIMGGAGSGV---LELLQKLKMPKPVLQIGLPDEFIKHGSPEE 600
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_SHEB8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella baltica (strain OS185) GN=dxs PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.309e-41 Identity = 94/200 (47.00%), Postives = 125/200 (62.50%), Query Frame = 2 Query: 32 KLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPAD 628 +LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T D PS R+PRG GA T L IGKG I G R+AIL +G+ +LA+ + ++ + TV D RF KPLD DL++++A HE+L+TVEE ++ GG G+ V L L P + + LPD +I HGSP + Sbjct: 411 QLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGCATGAT--QVEAMTALPIGKGVIKRVGKRIAILNFGT-----LLASALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHEVLVTVEENAIMGGAGAGVLEQLQK---LRMPKAVLQIGLPDEFIKHGSPEE 600
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_SHEB2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella baltica (strain OS223) GN=dxs PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.309e-41 Identity = 94/200 (47.00%), Postives = 125/200 (62.50%), Query Frame = 2 Query: 32 KLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPAD 628 +LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T D PS R+PRG GA T L IGKG I G R+AIL +G+ +LA+ + ++ + TV D RF KPLD DL++++A HE+L+TVEE ++ GG G+ V L L P + + LPD +I HGSP + Sbjct: 411 QLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGCATGAT--QVEAMTALPIGKGVIKRVGKRIAILNFGT-----LLASALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHEVLVTVEENAIMGGAGAGVLEQLQK---LRMPKAVLQIGLPDEFIKHGSPEE 600
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_PROMP (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dxs PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.769e-41 Identity = 92/197 (46.70%), Postives = 128/197 (64.97%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSP 622 LPV F +DRAG+VGADGPTH G +DI++M +PN V+MAP DEAEL M+ T+ + P+ R PRG+G+G + PL+IG+G IL EGD V I+ YGS+VQ AN+LK++ IS + +ARF +PLD DLI L + + ++T+EEG+ VGGFGS + L + I L++ +PD +DH SP Sbjct: 412 LPVSFVLDRAGIVGADGPTHQGQYDISYMRAIPNFVLMAPKDEAELQRMLITS-INYKGPTALRIPRGSGLGVAVMDEG-WEPLKIGEGEILEEGDDVLIIAYGSMVQSATETANLLKNRGISACIINARFVRPLDQDLIIPLVRKLKKVVTMEEGTLVGGFGSAIVEMLNDNDINIPVLRIG---IPDVLVDHASP 603 HSP 2 Score: 21.9422 bits (45), Expect = 2.769e-41 Identity = 7/11 (63.64%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 3 DQVVHDVDLQN 35 DQ++HDV +QN Sbjct: 401 DQLIHDVGIQN 411
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_NOSP7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dxs PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 3.608e-41 Identity = 93/197 (47.21%), Postives = 121/197 (61.42%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSP 622 LPV F +DRAG+VG+DGPTH G +DI ++ C+PN+V+MAP DEAEL MV T P R+PRGNG G L PLEIGK IL GD V I+ YG++V + AA +L I TV +ARF KPLDT+LI LA + +IT+EEG + GGFGS + L + IL + ++ +PD +DH P Sbjct: 412 LPVFFCLDRAGIVGSDGPTHQGMYDIAYLRCIPNIVIMAPKDEAELQRMVVTGVNHTSGPIAMRYPRGNGHGVPLMEEG-WEPLEIGKSEILRTGDDVLIVAYGTMVYPGMQAAEILSEHGIEATVINARFVKPLDTELILPLAKKIGRVITLEEGCIMGGFGSAIAEALMDADIL---VPVKRFGVPDVLVDHAEP 604 HSP 2 Score: 21.9422 bits (45), Expect = 3.608e-41 Identity = 7/11 (63.64%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 3 DQVVHDVDLQN 35 DQ++HDV +QN Sbjct: 401 DQIIHDVCIQN 411
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_NITMU (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=dxs PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.609e-41 Identity = 94/198 (47.47%), Postives = 129/198 (65.15%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPA 625 LPV FA+DRAGLVGADGPTH G+FD+T++ C+PN+ VMAPSDE E M+ TA + + P+ R+PRG+G G + PL G+G I EG +A+L +GS++Q C+ AA ++++ TVA+ RF KPLD DL+ LA HE+L+TVEE +V GG GS V L+ G L+L LPD ++D G P+ Sbjct: 405 LPVVFAIDRAGLVGADGPTHAGSFDLTYLRCIPNITVMAPSDENECRQMLYTAFQM-NTPAAVRYPRGSGSGVAQQKEMQMLPL--GRGEIRREGAEIALLAFGSMLQPCLEAA-----EELNATVANMRFVKPLDDDLVASLAANHELLVTVEENTVMGGAGSAVLESLSARGRTVPVLQLG---LPDTFLDQGDPS 591 HSP 2 Score: 21.557 bits (44), Expect = 3.609e-41 Identity = 7/11 (63.64%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 3 DQVVHDVDLQN 35 DQ++HDV +QN Sbjct: 394 DQLIHDVAIQN 404
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_BURXL (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia xenovorans (strain LB400) GN=dxs PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 6.124e-41 Identity = 98/203 (48.28%), Postives = 127/203 (62.56%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME-----GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPA 625 LPV FA+DRAGLVGADG TH GA+D+ F+ C+PNM VMA SDE E M+ T A+ P+ R+PRG G G + + T L +GKG I E G R+AIL +G++V A ++ ++ + TVA+ RF KPLD DL+RQLA H+ ++TVEEG V GG GS L SG+ L+L LPDR+IDHG PA Sbjct: 407 LPVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLYT-ALQQPNPTAVRYPRGAGTG--VATIKQMTALPLGKGEIRRETSQPAGKRIAILAFGTMV-----APSLAAAEQLDATVANMRFVKPLDADLVRQLAETHDAIVTVEEGCVMGGAGSACVEALLASGVTRPVLQLG---LPDRFIDHGDPA 598 HSP 2 Score: 22.3274 bits (46), Expect = 6.124e-41 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 3 DQVVHDVDLQN 35 DQ++HDV LQN Sbjct: 396 DQLIHDVALQN 406
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_SHEPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=dxs PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.719e-41 Identity = 91/198 (45.96%), Postives = 129/198 (65.15%), Query Frame = 2 Query: 32 KLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSP 622 +LPV FA+DR G+VGADGPTH GAFD++FM +PNMV+MAPSDE E M+ T +D P+ R+PRG+ GA T + IGKG I +G ++AIL +G+ +LA+++ ++ + TVAD RF KPLD +L++QLA H++L+TVEE ++ GG GS + L L L P + + LPD +I HG+P Sbjct: 411 RLPVLFAIDRGGIVGADGPTHQGAFDLSFMRIVPNMVIMAPSDENECRQMLYTGYCYNDGPTAVRYPRGSATGA--KQVETMTAMPIGKGLIKRQGKKIAILNFGT-----LLASSLTAAEALDATVADMRFVKPLDVELVKQLAESHDMLVTVEENAIMGGAGSGI---LELLQTLKLPKPVLLIGLPDEFIKHGAP 598
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_VIBSL (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio splendidus (strain LGP32) GN=dxs PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.775e-41 Identity = 96/202 (47.52%), Postives = 132/202 (65.35%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME------GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGS 619 LPV FA+DRAGLVGADG TH GAFD++FM C+PNMV+MAPSDE E M+ T PS R+PRGNG+G + ++ T LEIGKGRI+ E G +VAIL +G+ ++ + A+ I TVAD RF KPLD LI+QLA +H++L+T+EE ++ GG G+ V FL +L + + ++ LPD++I G+ Sbjct: 412 LPVMFAIDRAGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGHQ-HTGPSAVRYPRGNGMGTEI--QSEFTALEIGKGRIVRESKKAKDGSKVAILSFGTFLESALQTADA-----IDATVADMRFVKPLDEALIKQLAADHDVLVTIEENAIAGGAGAGVIEFLMQEKLL---MPVLNLGLPDKFIAQGT 602 The following BLAST results are available for this feature:
BLAST of FC931381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931381 ID=FC931381; Name=FC931381; organism=Citrus clementina; type=EST; length=748bpback to top |