FC931381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_BRUA2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain 2308) GN=dxs PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 1.289e-63 Identity = 119/196 (60.71%), Postives = 148/196 (75.51%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSP 622 LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+L EHE+L+ VEEG+VGGF SHV FL G+LD LK+R+++LPD Y DHG P Sbjct: 412 LPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLVREHEVLVMVEEGAVGGFSSHVLQFLATDGLLDRGLKVRALMLPDIYQDHGKP 605 HSP 2 Score: 23.8682 bits (50), Expect = 1.289e-63 Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 3 DQVVHDVDLQN 35 DQVVHDV +QN Sbjct: 401 DQVVHDVSIQN 411
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_BRASO (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp. (strain ORS278) GN=dxs PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.146e-63 Identity = 117/197 (59.39%), Postives = 150/197 (76.14%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPA 625 LPVRFA+DRAGLVGADG TH G+FD ++ CLPNMV+MA SDEAEL+HMVAT IDDRPS R+PRG G G +P G L IGKGR++ +G +VA+L +G+ + +C AA+ L + +S ++ADARF KPLD +L+ +LA +HEILIT+EEGS+GGFGSHV +L G+LDG LK+RSMVLPD + DH +PA Sbjct: 414 LPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAIDDRPSSVRYPRGEGRGVEMP--EVGVALPIGKGRMIRQGKQVALLSFGTRLAECEKAADELAAHGLSASIADARFMKPLDEELVLKLARDHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLKMRSMVLPDEFQDHDTPA 608
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_BARHE (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella henselae GN=dxs PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.146e-63 Identity = 116/196 (59.18%), Postives = 152/196 (77.55%), Query Frame = 2 Query: 32 KLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGS 619 KLPVRFA+DRAG VGADG TH G+FDI F++ LP VVMAPSDE ELMHMV TAA D P FR+PRG GIG LP +G LEIGKGRIL EG+R+A++ +G+ + + ++AA+ L ++ +S TVADARF KPLD DL+R+LA EHE+L+T+EEG++GGFG+H+ FL G+L+ LK+R++ LPD Y++HGS Sbjct: 412 KLPVRFAIDRAGFVGADGATHAGSFDIVFLTTLPEFVVMAPSDEVELMHMVRTAAAYDQGPISFRYPRGEGIGMDLP--QRGEILEIGKGRILHEGNRIALVCFGTRISEVLVAADELSAEGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLAQEGLLEHGLKVRTLKLPDEYLNHGS 605
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_RHOPB (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=dxs PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.803e-63 Identity = 115/196 (58.67%), Postives = 151/196 (77.04%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSP 622 LPVRFA+DRAGLVGADG TH G+FD F+ CLPNMV+MA SDEAEL+HMVAT I+DRPS R+PRG G G +P G LEIGKGRI+ EG+++A+L +G+ + +C AA+ L + +S T+ADARF KPLD +L+ +LA +HEIL+T+EEGS+GGFGSHV L G+LDG +++RS+VLPD ++DH +P Sbjct: 414 LPVRFAIDRAGLVGADGATHAGSFDNAFLGCLPNMVIMAASDEAELVHMVATQVAINDRPSAVRYPRGEGRGVEMP--EVGIALEIGKGRIVREGNKIALLSFGTRLAECEKAADELATLGLSTTIADARFMKPLDVELVLKLARDHEILLTIEEGSIGGFGSHVMQTLAEHGMLDGEVRMRSLVLPDEFMDHDTP 607
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_RHOP5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisA53) GN=dxs PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.803e-63 Identity = 115/197 (58.38%), Postives = 151/197 (76.65%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPA 625 LPVRFA+DRAGLVGADG TH G+FD ++ CLPN V+MA SDEAEL+HMVAT I+D PS R+PRG G G +P G PLEIGKGR++ +G+++A+L +G+ + +C AA+ L + +S TVADARF KPLD +L+ +LA EHE+LITVEEGS+GGFGSHV L G+LDG +++RS+VLPD ++DH +PA Sbjct: 414 LPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNFVIMAASDEAELVHMVATQVAINDAPSAVRYPRGEGRGVEMP--EVGIPLEIGKGRVVRQGNKIALLSFGTRLAECEKAADELATLGLSTTVADARFMKPLDVELVLKLAREHEVLITVEEGSIGGFGSHVMQTLAEHGMLDGEVRMRSLVLPDEFMDHDTPA 608
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_RHOPT (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=dxs PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 4.781e-63 Identity = 114/197 (57.87%), Postives = 152/197 (77.16%), Query Frame = 2 Query: 32 KLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSP 622 KLPVRFA+DRAGLVGADG TH G+FD ++ CLPNMV+MA +DEAEL+HMVAT IDDRPS R+PRG G G +P G PLEIGKGR++ +G++VA+L +G+ + + AA+ L + +S TVADARF KPLD +L+ +LA +HE+L+T+EEGS+GGFGSHV L G+LDG +K+R++VLPD ++DH +P Sbjct: 413 KLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRPSAVRYPRGEGRGVEMP--EVGIPLEIGKGRVIRQGNKVALLSFGTRLAEAEKAADELATLGLSTTVADARFMKPLDVELVLKLARDHEVLLTIEEGSIGGFGSHVMQTLAEHGMLDGEVKMRALVLPDVFMDHDNP 607
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_RHOPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris GN=dxs PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 4.781e-63 Identity = 114/197 (57.87%), Postives = 152/197 (77.16%), Query Frame = 2 Query: 32 KLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSP 622 KLPVRFA+DRAGLVGADG TH G+FD ++ CLPNMV+MA +DEAEL+HMVAT IDDRPS R+PRG G G +P G PLEIGKGR++ +G++VA+L +G+ + + AA+ L + +S TVADARF KPLD +L+ +LA +HE+L+T+EEGS+GGFGSHV L G+LDG +K+R++VLPD ++DH +P Sbjct: 413 KLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRPSAVRYPRGEGRGVEMP--EVGIPLEIGKGRVIRQGNKVALLSFGTRLAEAEKAADELATLGLSTTVADARFMKPLDVELVLKLARDHEVLLTIEEGSIGGFGSHVMQTLAEHGMLDGEVKMRALVLPDVFMDHDNP 607
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_BART1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=dxs PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 8.156e-63 Identity = 115/197 (58.38%), Postives = 151/197 (76.65%), Query Frame = 2 Query: 32 KLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSP 622 KLPVRFA+DRAG VGADG TH G+FDI F++ LP VVMAPSDE ELMHMV TAA D P FR+PRG GIG LP +G LEIGKGR+L EG+R+A++ +G+ + + + AA+ L ++ +S TVADARF KPLD DL+R+LA EHE+L+T+EEG++GGFG+H+ FL G+L+ LK+R++ PD Y++HGSP Sbjct: 412 KLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDELELMHMVRTAAAYDQGPISFRYPRGEGIGIDLP--QRGEILEIGKGRVLREGNRIALVCFGTRMSEVLRAADRLGAKGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLAQEGLLEHGLKVRTLKFPDEYLNHGSP 606
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS1_JANSC (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Jannaschia sp. (strain CCS1) GN=dxs1 PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.817e-62 Identity = 121/199 (60.80%), Postives = 150/199 (75.38%), Query Frame = 2 Query: 32 KLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPAD 628 +LPVRFA+DRAGLVGADG TH G++DI++++ LP VVMA +DEAEL HMV TA IDDRPS FRFPRG G+G +P ++GT LEIGKGR++ EG+RVAIL +G+ +++ AA L + I+ T+ADARF KPLD LI QLA HE LITVEEG+VGGFGSHV H L + + D +K RSMVLPD +ID SP D Sbjct: 414 RLPVRFAIDRAGLVGADGCTHAGSYDISYLANLPGFVVMAAADEAELRHMVRTALEIDDRPSAFRFPRGEGMGVDMP--DRGTALEIGKGRMISEGNRVAILNFGTRLKEVQEAAETLSQRGITPTIADARFAKPLDEALILQLARHHEALITVEEGAVGGFGSHVAHLLAENAVFDTGIKYRSMVLPDIFIDQASPKD 610
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_BARQU (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella quintana GN=dxs PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.373e-62 Identity = 115/197 (58.38%), Postives = 150/197 (76.14%), Query Frame = 2 Query: 32 KLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSP 622 KLPVRFA+DRAG VGADG TH G+FDI F++ LP VVMAPSDE ELMHMV TAA D P FR+PRG G+G LP +G LEIGKGR+L EG RVA++ +G+ + + ++AA+ L ++ +S TVADARF KPLD DL+R+LA EHE+L+ VEEG++GGFG+H+ FL G+L+ LK+R++ PD Y++HGSP Sbjct: 412 KLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDEVELMHMVRTAAAYDQGPISFRYPRGEGVGMDLP--QRGELLEIGKGRVLREGSRVALVCFGTRMSEVLVAADALIAEGLSTTVADARFAKPLDKDLMRRLACEHEVLVAVEEGAIGGFGAHLLQFLAKEGLLEHGLKVRTLKFPDEYLNHGSP 606 The following BLAST results are available for this feature:
BLAST of FC931381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931381 ID=FC931381; Name=FC931381; organism=Citrus clementina; type=EST; length=748bpback to top |