FC931381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_STRC1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Streptomyces sp. (strain CL190) GN=dxs PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.238e-19 Identity = 59/194 (30.41%), Postives = 103/194 (53.09%), Query Frame = 2 Query: 41 VRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDR--VAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDH 613 V F +DRAG+ G DG +H G +D++ + +P + + AP D + + A +DD P+ RFP+ +G +P ++ +G +L +R V ++ G + Q C+ A +L+++ I TV D R+ KP+D ++ LA EH ++ VE+ S G GS V L G D + +R +P++++ H Sbjct: 411 VTFVLDRAGVTGVDGASHNGMWDMSVLQVVPGLRIAAPRDADHVRAQLREAVAVDDAPTLIRFPK-ESVGPRIPALDR-----VGGLDVLHRDERPEVLLVAVGVMAQVCLQTAELLRARGIGCTVVDPRWVKPVD-PVLPPLAAEHRLVAVVEDNSRAAGVGSAVALAL---GDADVDVPVRRFGIPEQFLAH 594
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_CHLPN (1-deoxy-D-xylulose-5-phosphate synthase OS=Chlamydia pneumoniae GN=dxs PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.238e-19 Identity = 61/199 (30.65%), Postives = 98/199 (49.25%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPR---GNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGS 619 LPV FA+DRAGL DG +H G +D++F+ +P M++ P + ++ ++ PS R+P +G PN +P G L +G+ V I+ G++ + + L + IS TV D F KP D DL L H +IT+EE S+ GG S +F+ + + + + +PD ++ HGS Sbjct: 416 LPVIFAIDRAGLAYGDGRSHHGIYDMSFLRAMPQMIICQPRSQVVFQQLLYSSLHWSS-PSAIRYPNIPAPHGDPLTGDPNFLRSP---GNAETLSQGEDVLIIALGTLCFTALSIKHQLLAYGISATVVDPIFIKPFDNDLFSLLLMSHSKVITIEEHSIRGGLASEFNNFV---ATFNFKVDILNFAIPDTFLSHGS 607
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_CLAMS (1-deoxy-D-xylulose-5-phosphate synthase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=dxs PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.535e-19 Identity = 60/195 (30.77%), Postives = 102/195 (52.31%), Query Frame = 2 Query: 41 VRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDR-VAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGS 619 V F +DRAG+ G DGP+H G +D+ + +P++ + AP D L + A +DD P+ RF +G+ +G + + L+ G + + V I+ G + + A L +Q I TV D R+ P+ ++ +L H +++T+E+G VGG G+ + L +GI G +L LPD ++DHG+ Sbjct: 413 VTFVLDRAGVTGPDGPSHHGMWDLALLQIVPHIRLSAPRDATRLREELGEAVKVDDAPTVVRFSKGS-VGDEIEAVRR---LDDGVDVLHESASKDVLIVTVGPMATMGIEVAERLAAQGIGATVVDPRWVVPVPRSVV-ELGGTHRLVVTIEDGVVVGGIGTRIRQDLREAGIDTGVTELG---LPDEFLDHGT 599
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_SACEN (1-deoxy-D-xylulose-5-phosphate synthase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=dxs PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.228e-19 Identity = 60/195 (30.77%), Postives = 98/195 (50.26%), Query Frame = 2 Query: 38 PVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGS 619 PV +DR+G+ G DG +H G +D++ + +P + V AP D L + A +DD P+ RFP+G+ I V P + +++ E V + G+ Q V A L +Q I VTV D R+ P+ + LA H +++T+E+ G GGFG + + I + LR + +P+R++ H S Sbjct: 410 PVTVTLDRSGITGDDGASHNGMWDLSILGAIPGIQVAAPRDAVTLREELREAVAVDDGPTVMRFPKGSVIEEV-PAVERIGGVDVLSKPASDERSEVLLAAVGAFGQLGVAVAERLAAQGIGVTVVDPRWVVPV-PQAVLDLAARHSLVVTLEDCGRHGGFGWSLAAAMRDQEI---DVPLRDLAVPNRFLQHAS 599
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_LEIXX (1-deoxy-D-xylulose-5-phosphate synthase OS=Leifsonia xyli subsp. xyli GN=dxs PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.228e-19 Identity = 62/199 (31.16%), Postives = 100/199 (50.25%), Query Frame = 2 Query: 32 KLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDR--VAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGS 619 K V F +DRAG+ G DGP+H G +D+ + +P + + AP D +A A + D P+ RFP+G+ +P + + +L E D+ V ++ G + + A L +Q I TV D R+ P+ ++ LA H I++T+E+G VGG G+ V L +GI + + LPD +IDH + Sbjct: 410 KAGVTFVLDRAGVTGPDGPSHHGIWDLAILQVVPGIRLAAPRDATRFREELAEAVAVADAPTVLRFPKGS-----VPADIEAVRRRDDGVDVLHESDQKDVLLVTVGPMAGLGLRVAEALAAQGIGATVVDPRWVVPVPRSVL-DLAAGHRIVVTMEDGIRVGGIGTRVRQDLREAGI---DTAVDELGLPDEFIDHAT 599
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_CHLFF (1-deoxy-D-xylulose-5-phosphate synthase OS=Chlamydophila felis (strain Fe/C-56) GN=dxs PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.228e-19 Identity = 61/195 (31.28%), Postives = 94/195 (48.21%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHG 616 LPV A+DRAGL DG +H G +DI+F+ +PNM++ P A ++ + +++ + PS R+P I + + G G IL +G+ + I+G G + + L + IS TV D F KP D +L L H +I +EE S+ GG S FL G + + +PD + HG Sbjct: 415 LPVILAIDRAGLAYGDGCSHHGIYDISFLRAMPNMIICQPR-SAIVLQQLLQSSLQWNMPSAIRYPNIAAIQRDPIATDVNMHRDPGLGEILSQGEDILIIGLGHMCNTALSIKLQLLTHGISATVVDPVFIKPFDNNLFSILLMHHSKVIIIEEHSIRGGLASEFNDFLATYGF---KVDVLHFGIPDAFFSHG 605
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS1_STRAW (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Streptomyces avermitilis GN=dxs1 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.228e-19 Identity = 59/197 (29.95%), Postives = 104/197 (52.79%), Query Frame = 2 Query: 41 VRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPAD 628 V F +DRAG+ G DG +H G +D++ + +P + + AP D +L + A +DD P+ RFP+ +G +P + +++ E +V ++ G + C+ AA +L+++ I TV D R+ KP+D L LA EH ++ VE+ S G G+ V L LS + + +R +P++++ H A+ Sbjct: 411 VTFVLDRAGVTGVDGASHNGMWDMSILQVVPGLRIAAPRDADQLRAQLREAVAVDDAPTLLRFPK-ESVGPAIPAVDHVGGMDV--LHRFPESPQVLLVAVGVMAPVCLQAAELLEARGIGCTVVDPRWVKPVDPSL-PGLAAEHRLVAVVEDNSRAAGVGAAVA--LALSD-AEVDVPVRRFGIPEQFLAHAKRAE 600
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_NOCFA (1-deoxy-D-xylulose-5-phosphate synthase OS=Nocardia farcinica GN=dxs PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.747e-18 Identity = 62/202 (30.69%), Postives = 106/202 (52.48%), Query Frame = 2 Query: 32 KLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEI-----GKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGS 619 K PV +DRAG+ G DG +H G +D++ + +P + V AP D A L + A + D P+ RFP+G+ + L + +++ + + + V I+ G + + AA +L + +SVTV D R+ P+ +D + +LA + +++T+E+ G GG GS V L G LD P R + +P +++DH S Sbjct: 409 KQPVTVVLDRAGITGPDGASHNGMWDLSLLGIIPGIRVAAPRDAATLREELGEALAVTDGPTVLRFPKGS-VAEDLTAVERIDGVDVLRAADPESAVRTQRGDVLIVAVGPFARIGLAAAELLAPEGVSVTVVDPRWVLPV-SDTVVKLAENYRLVVTLEDSGLHGGIGSTVSARLRSVG-LDVP--TRDLGVPQQFLDHAS 605
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_LEPBL (1-deoxy-D-xylulose-5-phosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=dxs PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.685e-18 Identity = 52/158 (32.91%), Postives = 81/158 (51.27%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV 508 LPVRF +DRAG VG DG TH G FD+ ++ LPNM V PS+ +++ + D P RFP+ N + K L G R+L G +A+L GS++ + A +L+S SVT+ D + +PL + + + + + ++E V Sbjct: 414 LPVRFVIDRAGCVGPDGETHQGLFDLGYLLGLPNMDVFVPSNGQDMIDSLRWMETYDKAPIAIRFPKAN-VDLKTLDFYKEVDLRPGTFRVLKRGTDLALLSIGSMIDEAKKATEILESAGFSVTLIDLIWLRPLGVEALNEELSNVRRFVIIDESYV 570
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_LEPBJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=dxs PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.685e-18 Identity = 52/158 (32.91%), Postives = 81/158 (51.27%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV 508 LPVRF +DRAG VG DG TH G FD+ ++ LPNM V PS+ +++ + D P RFP+ N + K L G R+L G +A+L GS++ + A +L+S SVT+ D + +PL + + + + + ++E V Sbjct: 414 LPVRFVIDRAGCVGPDGETHQGLFDLGYLLGLPNMDVFVPSNGQDMIDSLRWMETYDKAPIAIRFPKAN-VDLKTLDFYKEVDLRPGTFRVLKRGTDLALLSIGSMIDEAKKATEILESAGFSVTLIDLIWLRPLGVEALNEELSNVRRFVIIDESYV 570 The following BLAST results are available for this feature:
BLAST of FC931381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931381 ID=FC931381; Name=FC931381; organism=Citrus clementina; type=EST; length=748bpback to top |