FC931381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_XANP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dxs PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.319e-56 Identity = 117/201 (58.21%), Postives = 144/201 (71.64%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILM---EGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD-GPLKLRSMVLPDRYIDHGSPA 625 LPVRF +DRAGLVGADG TH GAFDI F++CLP M VMAP+DEAEL+HM+AT DD PS RFPRG G+G P +G L IGKGRI+ EGD +A+L G+ + C+ AA L++ +VTVADARF KPLD +L+ +LA H L+TVEEGSVGGFGSHV +T G+LD G +K+R+MVLPD YID + A Sbjct: 412 LPVRFIIDRAGLVGADGATHAGAFDIAFLACLPGMTVMAPADEAELVHMMATMVAFDDGPSAVRFPRGEGVGVERP--ERGEVLPIGKGRIVHGTGEGD-IALLSLGTRLAACLDAAERLEAAGFTVTVADARFAKPLDRELVLKLAAGHGALVTVEEGSVGGFGSHVLQLVTDEGLLDRGAVKVRAMVLPDIYIDQETQA 609
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS2_RHORT (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=dxs2 PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 5.661e-56 Identity = 107/197 (54.31%), Postives = 140/197 (71.07%), Query Frame = 2 Query: 32 KLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSP 622 KLPVRFA+DRAG VGADG TH G FD+ F+ CLPN+VVM +DEAEL MV TAA D P R+PRG G+G +P + + PL IGKGRI+ EG VA+L G+ +Q C+ A +L ++ ++ TVADARF KP D +L+ LA HE+LI VEEG++GGF SHV +L G+LDG LKLR++ +PDR+ +H +P Sbjct: 414 KLPVRFAIDRAGFVGADGATHGGVFDMAFLGCLPNLVVMCAADEAELARMVVTAAGHDSGPIALRYPRGEGVGVEIPEDPQ--PLAIGKGRIVREGKGVALLSIGTRLQSCLEACEILAARGLTPTVADARFLKPFDEELVADLAARHEVLIVVEEGAIGGFCSHVATWLANQGLLDGGLKLRALHIPDRFFEHDAP 608
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS1_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs1 PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 7.394e-56 Identity = 111/199 (55.78%), Postives = 142/199 (71.36%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGD-RVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPAD 628 LPVRFA+DRAGLVGADG TH G+FDI ++ LP MVVMA +DEAEL+HMVATA +D P FR+PRGNG G LP G LEIGKGR++ EGD VAIL G+++ C AA +L+++ I+ T+ADARF KPLD LI L H+ LITVE+G++ GFG+ V + G+LD K+R+M LPDR+ID +PA+ Sbjct: 415 LPVRFAIDRAGLVGADGATHAGSFDIGYLGALPGMVVMAAADEAELVHMVATAGAHNDGPIAFRYPRGNGTGVPLP--ETGRVLEIGKGRMIREGDGEVAILSLGTLLSDCEAAARILEAEGINATIADARFAKPLDMALIANLVQTHKALITVEQGAMAGFGAMVLQSMAAEGLLDLGCKVRTMCLPDRFIDQAAPAE 611
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_ERYLH (1-deoxy-D-xylulose-5-phosphate synthase OS=Erythrobacter litoralis (strain HTCC2594) GN=dxs PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.068e-54 Identity = 104/196 (53.06%), Postives = 142/196 (72.45%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSP 622 LPVRFA+DRAGLVGADG TH G+FD+T+++ LPN VVMA +DEAEL+HM TAA D P FR+PRG GIG LP + LEIGKGRI+ G +VA+L G+ +++ AA+ L+++ +S T+AD RF KPLDT+LI QL HE+++T+EE S+GG G+HV + + G+ D LK+R+M LPD +I+ +P Sbjct: 413 LPVRFAIDRAGLVGADGSTHAGSFDVTYLATLPNFVVMAAADEAELVHMTYTAAEHDSGPIAFRYPRGGGIGIDLPETPE--KLEIGKGRIVKHGSKVALLSLGTRLEEAKRAADELEAKGLSTTIADMRFAKPLDTELIAQLMKNHEVVVTIEEASIGGLGAHVLTYASDEGLTDAGLKIRTMRLPDAFIEQDAP 606
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_SPHWW (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=dxs PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.394e-54 Identity = 107/196 (54.59%), Postives = 140/196 (71.43%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSP 622 LPVRFA+DRAGLVGADG TH G+FDIT+++ LPNMVVMA +DEAEL+HMV TAAV D P R+PRGNG+G LP + L IGKGRI+ EG VA+L G+ + + + AA+ L + +S TVAD RF KPLD +I+ L HE+ +T+EEG++GG G+HV + G++DG LKLR+M LPD + +H P Sbjct: 413 LPVRFAIDRAGLVGADGSTHAGSFDITYLATLPNMVVMAAADEAELVHMVHTAAVHDSGPIALRYPRGNGVGVALPAAPE--RLAIGKGRIVREGKTVALLSLGTRLGEALRAADQLDALGLSTTVADLRFAKPLDEAMIQTLLTSHEVAVTIEEGAIGGLGAHVLTLASDLGLIDGGLKLRTMRLPDAFQEHDKP 606
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_SPHAL (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingopyxis alaskensis GN=dxs PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.014e-53 Identity = 106/196 (54.08%), Postives = 139/196 (70.92%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSP 622 LPVRFA+DRAGLVGADG TH G+FDIT+++ LPNMVVMA +DEAEL+HM TAA D P FR+PRGNG G LP + LEIGKGR++ EG VAIL G+ + + + AA+ L+++ +S +V D RF KPLD +LIR+ HE+ +TVEEGS+GG G+HV + G++D LKLR++ LPD + D P Sbjct: 413 LPVRFAIDRAGLVGADGSTHAGSFDITYLATLPNMVVMAAADEAELVHMTYTAAEHDAGPIAFRYPRGNGTGVALPAVPQ--KLEIGKGRVVREGKTVAILSLGTRLAEALKAADTLEARGLSTSVIDLRFAKPLDEELIRRTLAAHEVCVTVEEGSIGGLGAHVLTLASDEGLIDAGLKLRTLRLPDMFQDQDKP 606
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS2_ZYMMO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Zymomonas mobilis GN=dxs2 PE=3 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 2.463e-49 Identity = 99/190 (52.11%), Postives = 133/190 (70.00%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRY 604 LPVRFA+DRAGLVGADG TH G+FD+ FM LPNMVVMAPSDE EL +MV + A D P R+PRGNG+G L + P IGKGR++ G +VAIL G+ +++ + AA+ L +Q +S +VAD RF KPLD L RQL H+++IT+EEG++GGF + V + G++D LK+R++ LPDR+ Sbjct: 413 LPVRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDERELANMVHSMAHYDQGPISVRYPRGNGVGVSLEGEKEILP--IGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMDDGLKIRTLRLPDRF 600 HSP 2 Score: 21.9422 bits (45), Expect = 2.463e-49 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 3 DQVVHDVDLQN 35 DQ+VHDV +QN Sbjct: 402 DQLVHDVAIQN 412
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS1_ZYMMO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Zymomonas mobilis GN=dxs1 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.463e-49 Identity = 99/190 (52.11%), Postives = 133/190 (70.00%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRY 604 LPVRFA+DRAGLVGADG TH G+FD+ FM LPNMVVMAPSDE EL +MV + A D P R+PRGNG+G L + P IGKGR++ G +VAIL G+ +++ + AA+ L +Q +S +VAD RF KPLD L RQL H+++IT+EEG++GGF + V + G++D LK+R++ LPDR+ Sbjct: 413 LPVRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDERELANMVHSMAHYDQGPISVRYPRGNGVGVSLEGEKEILP--IGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMDDGLKIRTLRLPDRF 600 HSP 2 Score: 21.9422 bits (45), Expect = 2.463e-49 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 3 DQVVHDVDLQN 35 DQ+VHDV +QN Sbjct: 402 DQLVHDVAIQN 412
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_CYAP8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain PCC 8801) GN=dxs PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.619e-45 Identity = 97/197 (49.24%), Postives = 123/197 (62.44%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSP 622 LPV F MDRAG+VGADGPTH G +DI ++ C+PNM +MAP DEAEL M+ T D P R+PRGNGIG L PL IGKG IL GD + ILGYG++V + AA L+ I TV +ARF KPLDT+LI LA ++T+EEG +GGFGS V + +L + L+ +PDR +DH +P Sbjct: 412 LPVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMIVTGVNYTDGPIAMRYPRGNGIGVPLMEEG-WEPLPIGKGEILRNGDDLLILGYGTMVNTALQAAETLREHGIEATVVNARFVKPLDTELILPLAQRIGKVVTLEEGCLMGGFGSAVAEAFSDHNVL---VPLKRFGVPDRLVDHATP 604 HSP 2 Score: 21.557 bits (44), Expect = 2.619e-45 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 3 DQVVHDVDLQN 35 DQV+HDV +QN Sbjct: 401 DQVLHDVCIQN 411
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_ALHEH (1-deoxy-D-xylulose-5-phosphate synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=dxs PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.283e-44 Identity = 99/199 (49.75%), Postives = 135/199 (67.84%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPAD 628 LPV FA+DRAGLVGADGPTH G+FD++++ C+PNM + APSDEAE +++T D P R+PRG+G GA LP + PL IGKG G R+A+L +G++V + A L +TVAD RF +PLD LIR+LA+ H++L+TVEE +V GG GS V +L +G LD P +R + LPDR++DHG+PA+ Sbjct: 412 LPVLFAVDRAGLVGADGPTHHGSFDLSYLRCVPNMTIAAPSDEAECWRLLST-GYHHDGPFAVRYPRGSGPGAALPEADL-DPLAIGKGVCRRRGRRIAVLAFGTLVVPALAVAEAL-----DLTVADMRFVRPLDEALIRELADTHDLLVTVEENAVAGGAGSGVSEYLARAG-LDVP--VRHLGLPDRFVDHGTPAE 600 HSP 2 Score: 22.7126 bits (47), Expect = 1.283e-44 Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 3 DQVVHDVDLQN 35 DQ+VHDV LQN Sbjct: 401 DQLVHDVALQN 411 The following BLAST results are available for this feature:
BLAST of FC931381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931381 ID=FC931381; Name=FC931381; organism=Citrus clementina; type=EST; length=748bpback to top |