FC931381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_VIBVY (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio vulnificus (strain YJ016) GN=dxs PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.231e-44 Identity = 100/196 (51.02%), Postives = 132/196 (67.35%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGS 619 LPV FA+DRAGLVGADG TH GAFD+++M C+PNMV+MAPSDE E M+ T PS R+PRGNG+G P ++ T LEIGKGR++ +G++VAIL +G+ + + AA L + TVAD RF KPLD LIRQLANEH++LIT+EE ++ GG G+ V F+ I+ L L LPD++I G+ Sbjct: 412 LPVMFAIDRAGLVGADGQTHQGAFDLSYMRCIPNMVIMAPSDENECRQMLYTGHK-HQGPSAVRYPRGNGMGT--PIESEFTALEIGKGRLVRQGEKVAILSFGTFLANALEAAEAL-----NATVADMRFVKPLDEALIRQLANEHDVLITIEENAIAGGAGAGVIEFMMQEKIMKPVLNLG---LPDKFIHQGT 596
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_MAGSM (1-deoxy-D-xylulose-5-phosphate synthase OS=Magnetococcus sp. (strain MC-1) GN=dxs PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.231e-44 Identity = 99/196 (50.51%), Postives = 133/196 (67.86%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGS 619 LPV FA+DRAGLVGADG TH GA+D++++ +P M +MAP+DE EL HM+ TA ++ +P R+PRG +G LPP LEIG+GR L +G+ AIL G V + AA +L+ Q ISV+V DARF KPLD L++++A H +++ VEE +V GGFGS V L+ G LD LK+R M +PDRYI HG+ Sbjct: 408 LPVIFALDRAGLVGADGATHAGAYDLSYLRTVPGMTIMAPADENELRHMLHTAVALN-KPVALRYPRGTALG--LPPEPPHV-LEIGRGRTLRKGEHAAILAVGQPVHPALEAAAILEQQGISVSVYDARFVKPLDQRLLQEVAM-HGVVLVVEENAVQGGFGSAVLESLSNQGALDRGLKIRCMGIPDRYIPHGT 598
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_LARHH (1-deoxy-D-xylulose-5-phosphate synthase OS=Laribacter hongkongensis (strain HLHK9) GN=dxs PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 3.701e-44 Identity = 100/198 (50.51%), Postives = 130/198 (65.66%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPA 625 LPV FA+DRAGLVGADGPTH GAFD++++ C+PNMVVMAPSDE E ++ T A + D P+ R+PRG G G P T L +G+G + +G +AIL +GS+V + AA+ L +VAD RF KPLDT LIRQLA HE+L+TVEE V GG GS V L +GI + + ++ LPD Y++HG PA Sbjct: 408 LPVVFAIDRAGLVGADGPTHAGAFDLSYLRCIPNMVVMAPSDENECRQLLYT-AFLHDGPTAVRYPRGTGPGC--EPVAAMTALPLGQGTLRRQGKGIAILAFGSMVHPALAAADQL-----DASVADMRFVKPLDTALIRQLAASHELLVTVEENVVMGGTGSAVLETLAAAGI---TVPVLNLGLPDHYVEHGDPA 594 HSP 2 Score: 22.3274 bits (46), Expect = 3.701e-44 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 3 DQVVHDVDLQN 35 DQ++HDV LQN Sbjct: 397 DQLIHDVALQN 407
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_VIBVU (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio vulnificus GN=dxs PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.806e-44 Identity = 99/196 (50.51%), Postives = 132/196 (67.35%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGS 619 LPV FA+DRAGLVGADG TH GAFD+++M C+PNMV+MAPSDE E M+ T PS R+PRGNG+G P ++ T LEIGKGR++ +G++VAIL +G+ + + AA L + TVAD RF KPLD L+RQLANEH++LIT+EE ++ GG G+ V F+ I+ L L LPD++I G+ Sbjct: 412 LPVMFAIDRAGLVGADGQTHQGAFDLSYMRCIPNMVIMAPSDENECRQMLYTGHK-HQGPSAVRYPRGNGMGT--PIESEFTALEIGKGRLVRQGEKVAILSFGTFLANALEAAEAL-----NATVADMRFVKPLDEALLRQLANEHDVLITIEENAIAGGAGAGVIEFMMQEKIMKPVLNLG---LPDKFIHQGT 596
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_THEEB (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermosynechococcus elongatus (strain BP-1) GN=dxs PE=3 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 4.971e-44 Identity = 97/198 (48.99%), Postives = 125/198 (63.13%), Query Frame = 2 Query: 32 KLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSP 622 KLPV F MDRAG+VGADGPTH G +DI ++ CLPNMV+MAP DEAEL M+ T D P R+PRGNG G L PLEIGKG +L G+ + ++ YGS+V + A +LK +S V +ARF KPLDT+LI LA + ++T+EEG +GGFGS V L + IL L+L +PD ++H SP Sbjct: 411 KLPVFFCMDRAGIVGADGPTHQGMYDIAYLRCLPNMVLMAPKDEAELQRMIVTGINYTDGPIALRYPRGNGYGVALMEEG-WEPLEIGKGELLRSGEDLLLVAYGSMVYPAMQVAEILKEHGMSAAVINARFAKPLDTELILPLAKQIGRVVTLEEGCLMGGFGSAVLEALQEADILVPVLRLG---VPDILVEHASP 604
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_SYNJB (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. GN=dxs PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.107e-43 Identity = 95/200 (47.50%), Postives = 125/200 (62.50%), Query Frame = 2 Query: 32 KLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPAD 628 KLPV F +DRAG+VGADGPTH G +DI ++ C+P MV+MAP DEAEL MV T P R+PRG+G+G L PL IGK +L G V IL YGS+V + AA +LK IS TV +ARF KPLDT+LI LA + +++TVEEG +GGFGS V L + D + L + +PD +++H +P + Sbjct: 416 KLPVFFCLDRAGVVGADGPTHQGMYDIAYLRCIPEMVLMAPKDEAELQRMVVTGIQYTQGPIAMRYPRGSGVGVPLAEEG-WEPLPIGKAEVLRSGGEVLILAYGSMVHPSLQAAEILKEHGISATVVNARFAKPLDTELILPLAEQSRLVVTVEEGCLMGGFGSAVAEALLDA---DLAVPLLRLGVPDVWVEHATPEE 611
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_CYAP7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain PCC 7424) GN=dxs PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.390e-43 Identity = 93/197 (47.21%), Postives = 122/197 (61.93%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSP 622 LPV F MDRAG+VGADGPTH G +DI ++ C+PN+V+MAP DEAEL M+ T D P R+PRGNG+G L L IGKG IL GD + +LGYG++V + A +L I TV +ARF KPLDTDLI LA + ++T+EEG +GGFGS V L +L + ++ +PD+ +DH P Sbjct: 411 LPVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNLVIMAPKDEAELQRMIVTGVNYTDGPIAMRYPRGNGLGVPLMEEG-WEALPIGKGEILRNGDDLLLLGYGTMVNTAMQVAEILGEHGIEATVVNARFVKPLDTDLIVPLAKQTGKVVTLEEGCLMGGFGSAVAEALLDHNVL---VPVKRFGVPDQLVDHAKP 603 HSP 2 Score: 22.3274 bits (46), Expect = 1.390e-43 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 3 DQVVHDVDLQN 35 DQV+HDV +QN Sbjct: 400 DQVIHDVCIQN 410
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_SHEWM (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=dxs PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.467e-43 Identity = 96/200 (48.00%), Postives = 130/200 (65.00%), Query Frame = 2 Query: 32 KLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPAD 628 KLPV FA+DR G+VGADGPTH GAFD++FM +PNMV+MAPSDE E M+ T +D P+ R+PRG+ GA P + T L IGKG I +G +VAIL +G+ +LA+ + + + TVAD RF KPLD +LI++LAN H++L+TVEE ++ GG GS V L L L P+ + + LPD +I HG + Sbjct: 411 KLPVLFAIDRGGIVGADGPTHQGAFDLSFMRTVPNMVIMAPSDENECRQMLYTGYCYNDGPTAVRYPRGSATGA--PQIEEMTALPIGKGLIKRQGQKVAILNFGT-----LLASVLTAGESLDATVADMRFVKPLDVELIKELANSHDVLVTVEENAIMGGAGSGV---LELLQQLKQPMPVLQLGLPDEFIKHGDSGE 600
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_SYNY3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechocystis sp. (strain PCC 6803) GN=dxs PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.208e-43 Identity = 95/198 (47.98%), Postives = 123/198 (62.12%), Query Frame = 2 Query: 32 KLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSP 622 KLPV F +DRAG+VGADGPTH G +DI ++ C+PN+V+MAP DEAEL M+ T R+PRGNGIG L PLEIGK IL GD V +LGYGS+V + A +L I TV +ARF KPLDT+LI LA ++T+EEG +GGFGS V L + +L + L+ + +PD +DH +P Sbjct: 411 KLPVFFCLDRAGIVGADGPTHQGMYDIAYLRCIPNLVLMAPKDEAELQQMLVTGVNYTGGAIAMRYPRGNGIGVPLMEEG-WEPLEIGKAEILRSGDDVLLLGYGSMVYPALQTAELLHEHGIEATVVNARFVKPLDTELILPLAERIGKVVTMEEGCLMGGFGSAVAEALMDNNVL---VPLKRLGVPDILVDHATP 604
BLAST of FC931381 vs. ExPASy Swiss-Prot
Match: DXS_CYAA5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain ATCC 51142) GN=dxs PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.807e-43 Identity = 91/197 (46.19%), Postives = 123/197 (62.44%), Query Frame = 2 Query: 35 LPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSP 622 LPV F +DRAG+VGADGPTH G +DI ++ C+PN+ +MAP DEAEL MV T D P R+PRG+G+G L P+ IGKG IL GD V ++GYG++V Q + A +LK I TV +ARF KPLDT+LI LA ++T+EEG +GGFGS V L ++ + ++ +PD+ +DH P Sbjct: 412 LPVFFCLDRAGIVGADGPTHQGLYDIAYLRCIPNLTIMAPKDEAELQRMVVTGINHTDGPIAMRYPRGSGVGVPLMEEG-WEPVSIGKGEILRNGDDVLLVGYGTMVHQSLQVAEILKEHGIEATVVNARFVKPLDTELIVPLAQRIGKVVTLEEGCLMGGFGSAVAEALLDHDVV---VPIKRFGVPDKLVDHAKP 604 HSP 2 Score: 21.557 bits (44), Expect = 6.807e-43 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 3 DQVVHDVDLQN 35 DQV+HDV +QN Sbjct: 401 DQVLHDVCIQN 411 The following BLAST results are available for this feature:
BLAST of FC931381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931381 ID=FC931381; Name=FC931381; organism=Citrus clementina; type=EST; length=748bpback to top |