FC931384
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: RL10A_HUMAN (60S ribosomal protein L10a OS=Homo sapiens GN=RPL10A PE=1 SV=2) HSP 1 Score: 219.164 bits (557), Expect = 1.683e-60 Identity = 105/195 (53.85%), Postives = 142/195 (72.82%), Query Frame = 1 Query: 67 SKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 651 SK+ D L EA+ ++ + + +R F ET+ELQI LKNYDPQKDKRFSG+V+L PRPK VC+LGD QH +EA+ + + +MD+E Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH E++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M + ++ N+ ++VNFLVSLLKK Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKK 196 HSP 2 Score: 35.4242 bits (80), Expect = 1.683e-60 Identity = 13/19 (68.42%), Postives = 18/19 (94.74%), Query Frame = 3 Query: 639 IVEENWQNVRCLYLKSTMG 695 ++++NWQNVR LY+KSTMG Sbjct: 193 LLKKNWQNVRALYIKSTMG 211
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: RL10A_BOVIN (60S ribosomal protein L10a OS=Bos taurus GN=RPL10A PE=2 SV=3) HSP 1 Score: 219.164 bits (557), Expect = 1.683e-60 Identity = 105/195 (53.85%), Postives = 142/195 (72.82%), Query Frame = 1 Query: 67 SKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 651 SK+ D L EA+ ++ + + +R F ET+ELQI LKNYDPQKDKRFSG+V+L PRPK VC+LGD QH +EA+ + + +MD+E Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH E++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M + ++ N+ ++VNFLVSLLKK Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKK 196 HSP 2 Score: 35.4242 bits (80), Expect = 1.683e-60 Identity = 13/19 (68.42%), Postives = 18/19 (94.74%), Query Frame = 3 Query: 639 IVEENWQNVRCLYLKSTMG 695 ++++NWQNVR LY+KSTMG Sbjct: 193 LLKKNWQNVRALYIKSTMG 211
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: RL10A_CHLRE (60S ribosomal protein L10a OS=Chlamydomonas reinhardtii GN=RPL10A PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.195e-60 Identity = 114/196 (58.16%), Postives = 142/196 (72.45%), Query Frame = 1 Query: 64 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 651 MSK+ +D LRE++S++V+ +K T R F ET+ELQIGLKNYDPQKDKRFSGSV+LP +PRP+M+V GD +H E+A IG+D VE YHAFLAS+SVIKQIPRLLGPGLNKAGKFP + ++LE V +TK ++KFQLKKVLCMGVAV N+ M E +I N+ ++NFLVSLLKK Sbjct: 1 MSKISNDVLRESVSALVEGAK-TKPRKFQETVELQIGLKNYDPQKDKRFSGSVRLPFVPRPRMRV-RAGDVKHCEQAGAIGVDAKGVEDLKKLNKNKKLVKKLAQAYHAFLASDSVIKQIPRLLGPGLNKAGKFPAPI--NKNLEEMVLDTKCSIKFQLKKVLCMGVAVANVGMTEGEIRTNIMYAINFLVSLLKK 192 HSP 2 Score: 38.891 bits (89), Expect = 2.195e-60 Identity = 14/19 (73.68%), Postives = 19/19 (100.00%), Query Frame = 3 Query: 639 IVEENWQNVRCLYLKSTMG 695 ++++NWQNVRCLY+KSTMG Sbjct: 189 LLKKNWQNVRCLYIKSTMG 207
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: RL10A_CAEEL (60S ribosomal protein L10a OS=Caenorhabditis elegans GN=rpl-10a PE=1 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.731e-60 Identity = 110/196 (56.12%), Postives = 144/196 (73.47%), Query Frame = 1 Query: 64 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 651 MSK+ ++L EAI+ +++ S E R F ETIELQIGLKNYDPQKDKRFSGS++L HIPRP MKVC+ GD H++EA + M + Y AF+ASES+IKQIPR+LGPGLNKAGKFP++VTH ESL+SK +E +ATVKFQ+KKVLC+ VAVG++ + ++++ N+ +S+NFLVSLLKK Sbjct: 1 MSKVSRESLNEAIAEVLKGSSE-KPRKFRETIELQIGLKNYDPQKDKRFSGSIRLKHIPRPNMKVCVFGDQHHLDEAAAGDIPSMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELVSNISLSINFLVSLLKK 195 HSP 2 Score: 31.5722 bits (70), Expect = 3.731e-60 Identity = 12/19 (63.16%), Postives = 17/19 (89.47%), Query Frame = 3 Query: 639 IVEENWQNVRCLYLKSTMG 695 ++++NWQNVR L +KSTMG Sbjct: 192 LLKKNWQNVRSLNIKSTMG 210
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: RL10A_MOUSE (60S ribosomal protein L10a OS=Mus musculus GN=Rpl10a PE=1 SV=3) HSP 1 Score: 217.238 bits (552), Expect = 6.342e-60 Identity = 104/195 (53.33%), Postives = 141/195 (72.31%), Query Frame = 1 Query: 67 SKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 651 SK+ D L EA+ ++ + + +R F ET+ELQI LKNYDPQKDKRFSG+V+L PRPK VC+LGD QH +E + + + +MD+E Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH E++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M + ++ N+ ++VNFLVSLLKK Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDERKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKK 196 HSP 2 Score: 35.4242 bits (80), Expect = 6.342e-60 Identity = 13/19 (68.42%), Postives = 18/19 (94.74%), Query Frame = 3 Query: 639 IVEENWQNVRCLYLKSTMG 695 ++++NWQNVR LY+KSTMG Sbjct: 193 LLKKNWQNVRALYIKSTMG 211
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: RL10A_MACFA (60S ribosomal protein L10a OS=Macaca fascicularis GN=RPL10A PE=2 SV=3) HSP 1 Score: 215.312 bits (547), Expect = 2.390e-59 Identity = 103/195 (52.82%), Postives = 141/195 (72.31%), Query Frame = 1 Query: 67 SKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 651 SK+ D L EA+ ++ + + +R F ET+ELQI LKNYDPQKDKRFSG+V+L PRPK VC+LGD QH +EA+ + + +MD+E Y AFLASES+IKQIPR+LGPGLNKAGKFP+ +TH E++ +KV+E K+T+KFQ+K+VLC+ VAVG++ M + ++ N+ ++VNFLVSLLKK Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSPLTHNENMVAKVDEVKSTIKFQMKRVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKK 196 HSP 2 Score: 35.4242 bits (80), Expect = 2.390e-59 Identity = 13/19 (68.42%), Postives = 18/19 (94.74%), Query Frame = 3 Query: 639 IVEENWQNVRCLYLKSTMG 695 ++++NWQNVR LY+KSTMG Sbjct: 193 LLKKNWQNVRALYIKSTMG 211
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: RL10A_DICDI (60S ribosomal protein L10a OS=Dictyostelium discoideum GN=rpl10a PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 4.422e-58 Identity = 103/197 (52.28%), Postives = 142/197 (72.08%), Query Frame = 1 Query: 64 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXX-YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 651 MSK+ SD +R +S + + ++E+ KR F ET+ELQI LKNYD +KDKRFSG +K+ + +PK+ VC+ D QH +EA KIG ++MD+E Y AFLASES+++Q+P+LLGPGLNK GKFPTL+TH E + SK+N+ K+TVKFQLKKVLC+ VAVG++ + E+++ N+ S+NFLVSLLKK Sbjct: 1 MSKISSDQVRSIVSQLFKEAQES-KRGFLETVELQINLKNYDTKKDKRFSGQIKIGTVTKPKLSVCVFADQQHCDEATKIGAEFMDIEALKKIGPKNKKAIKKLSKKYDAFLASESILRQVPKLLGPGLNKVGKFPTLLTHSEDMASKINDVKSTVKFQLKKVLCLAVAVGHIELTEREVATNIIQSINFLVSLLKK 196 HSP 2 Score: 32.3426 bits (72), Expect = 4.422e-58 Identity = 10/21 (47.62%), Postives = 19/21 (90.48%), Query Frame = 3 Query: 639 IVEENWQNVRCLYLKSTMGPS 701 ++++ WQN++ LY+K++MGPS Sbjct: 193 LLKKGWQNIKTLYVKTSMGPS 213
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: RL1_YEAST (60S ribosomal protein L1 OS=Saccharomyces cerevisiae GN=RPL1A PE=1 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.597e-58 Identity = 109/205 (53.17%), Postives = 144/205 (70.24%), Query Frame = 1 Query: 64 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKTGRMSGASI 678 MSK+ S +RE + +++YS ET KRNF ET+ELQ+GLKNYDPQ+DKRFSGS+KLP+ PRP M +C+ GDA V+ A+ G+D M V+ Y+AF+ASE +IKQ+PRLLGP L+KAGKFPT V+H + L KV + ++T+KFQLKKVLC+ VAVGN+ MEE + + MSVNF VSLLKK + G+ + Sbjct: 1 MSKITSSQVREHVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGSLKLPNCPRPNMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQVPRLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKKVLCLAVAVGNVEMEEDVLVNQILMSVNFFVSLLKKNWQNVGSLV 205
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: RL10A_ASHGO (60S ribosomal protein L10a OS=Ashbya gossypii GN=RPL10A PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.892e-57 Identity = 108/205 (52.68%), Postives = 145/205 (70.73%), Query Frame = 1 Query: 64 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKTGRMSGASI 678 MSK+ + +R+ + +++YS ET KRNF ET+ELQ+GLKNYDPQ+DKRFSG++KLP PRP M VC+ GDA V+ A+ G+D M V+ Y+AF+ASE +IKQ+PRLLGP L+KAGKFPT V+H + L SKV + ++T+KFQLKKVLC+ VAVGN+ M+E + + MSVNFLVSLLKK + G+ + Sbjct: 1 MSKITTTHVRDNVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGTLKLPVCPRPNMSVCIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLAKKYNAFIASEVLIKQVPRLLGPQLSKAGKFPTPVSHNDDLYSKVTDVRSTIKFQLKKVLCLAVAVGNVEMDEDTLVNQILMSVNFLVSLLKKNWQNVGSLV 205
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: RL1B_SCHPO (60S ribosomal protein L1-B OS=Schizosaccharomyces pombe GN=rpl1b PE=1 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 6.638e-57 Identity = 109/205 (53.17%), Postives = 149/205 (72.68%), Query Frame = 1 Query: 64 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKTGRMSGASI 678 MSK+ ++R + I++ S+E KRNFTET+ELQIGLKNYDPQ+DKRFSG++KLP++PRP M +C+LGDA ++ A+ G+D M V+ Y AF+ASE +IKQIPRLLGPGL+KAGKFP+ V+H + L K+ E K+T+KFQLKKVLC+GVAVG++ M E+Q+ N+ ++VNFLVSLLKK + G+ + Sbjct: 1 MSKVSVASVRSNVEQILKGSEE-KKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPRPNMAICILGDAHDLDRAKHGGVDAMSVDDLKKLNKNKKLVKKLAKKYDAFIASEVLIKQIPRLLGPGLSKAGKFPSPVSHADDLYGKITEVKSTIKFQLKKVLCLGVAVGHVEMSEEQLIANIMLAVNFLVSLLKKGWQNIGSLV 204 The following BLAST results are available for this feature:
BLAST of FC931384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931384 ID=FC931384; Name=FC931384; organism=Citrus clementina; type=EST; length=744bpback to top |