FC931385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P4_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 4 OS=Caenorhabditis elegans GN=gpd-4 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.515e-31 Identity = 71/147 (48.30%), Postives = 91/147 (61.90%), Query Frame = 1 Query: 58 KIKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNE-------LKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477 K +GINGFGRIGRLV R +++D V++VAVNDPFI+ DYM Y+FKYDS HGQ+K + KD K+ + VF ++P I W A++VVESTGVFT V+ISAPS DAPM+VVGVN ++Y Sbjct: 3 KANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYDGDFLIVQKDGKS----SHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAPMYVVGVNHEKY 145
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P1_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Caenorhabditis elegans GN=gpd-1 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.515e-31 Identity = 71/147 (48.30%), Postives = 91/147 (61.90%), Query Frame = 1 Query: 58 KIKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNE-------LKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477 K +GINGFGRIGRLV R +++D V++VAVNDPFI+ DYM Y+FKYDS HGQ+K + KD K+ + VF ++P I W A++VVESTGVFT V+ISAPS DAPM+VVGVN ++Y Sbjct: 3 KANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYDGDFLIVQKDGKS----SHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAPMYVVGVNHEKY 145
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3PT_RAT (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus GN=Gapdhs PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.979e-31 Identity = 69/143 (48.25%), Postives = 95/143 (66.43%), Query Frame = 1 Query: 55 KKIKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKP 483 K++ +GINGFGRIGRLV RV +++ V +VAVNDPFI +YM YMFKYDS HG++K ++ K+ + L+ + VF + P+EIPW+ G YVVE+TGV+ V+++APS DAPM V+GVNEK+Y P Sbjct: 98 KELTVGINGFGRIGRLVLRVCMEKG-VRVVAVNDPFIDPEYMVYMFKYDSTHGRYK-GTVEHKNGR-LVVDNLEINVFQCKEPKEIPWSSVGNPYVVEATGVYLSIEAASGHISSGARRVIVTAPSPDAPMLVMGVNEKDYNP 237
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3PT_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Homo sapiens GN=GAPDHS PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 1.979e-31 Identity = 68/143 (47.55%), Postives = 96/143 (67.13%), Query Frame = 1 Query: 55 KKIKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKP 483 +++ +GINGFGRIGRLV R +++ V++VAVNDPFI +YM YMFKYDS HG++K ++ ++ + L+ ++V+ + P++IPW G+ YVVESTGV+ VVISAPS DAPMFV+GVNE +Y P Sbjct: 74 RELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYK-GSVEFRNGQ-LVVDNHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNP 213
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P2_DROPS (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Drosophila pseudoobscura pseudoobscura GN=Gapdh2 PE=2 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 1.979e-31 Identity = 74/141 (52.48%), Postives = 90/141 (63.83%), Query Frame = 1 Query: 64 KIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486 KIGINGFGRIGRLV R + + +VAVNDPFI +YM Y+FK+DS HG++K + + ++ G+K + VF R+P I WA GAEYVVESTGVFT VVISAPS DAPMFV GVN YKP+ Sbjct: 3 KIGINGFGRIGRLVLRAAIDKG-ASVVAVNDPFIDVNYMVYLFKFDSTHGRFK-GTVAAEGGFLVVNGQK-ITVFSERDPANINWASAGAEYVVESTGVFTTIEKASTHLKGGAKKVVISAPSADAPMFVCGVNLDAYKPD 140
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P1_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=TDH1 PE=1 SV=3) HSP 1 Score: 134.806 bits (338), Expect = 1.979e-31 Identity = 69/142 (48.59%), Postives = 87/142 (61.27%), Query Frame = 1 Query: 61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486 I+I INGFGRIGRLV R+ LQR D+E+VAVNDPFIS DY YM KYDS HG++K D+K ++ +A + R+P +PW + V+STGVF VVI+APS APMFVVGVN +Y P+ Sbjct: 2 IRIAINGFGRIGRLVLRLALQRKDIEVVAVNDPFISNDYAAYMVKYDSTHGRYKGT--VSHDDKHIIIDGVKIATYQERDPANLPWGSLKIDVAVDSTGVFKELDTAQKHIDAGAKKVVITAPSSSAPMFVVGVNHTKYTPD 141
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P1_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Agaricus bisporus GN=gpd1 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.979e-31 Identity = 69/142 (48.59%), Postives = 90/142 (63.38%), Query Frame = 1 Query: 61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486 + +GINGFGRIGRLV R LQ + +VAVNDPF+ +YM Y+FKYDSVHG+++ +++ KD K ++ G K +A F R P I WA GAEY+VESTGVF VVI+AP P +VVGVN +Y P+ Sbjct: 2 VNVGINGFGRIGRLVLRNALQMQILTVVAVNDPFLDVEYMAYLFKYDSVHGRYQ-GKVETKDGKLIIDGHK-IAAFAEREPANIKWADCGAEYIVESTGVFKTEELAKEHLKGGAKKVVITAPGSGVPTYVVGVNLDKYDPK 141
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3PT_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Mus musculus GN=Gapdhs PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 3.376e-31 Identity = 67/143 (46.85%), Postives = 92/143 (64.34%), Query Frame = 1 Query: 55 KKIKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKP 483 +++ +GINGFGRIGRLV RV +++ + +VAVNDPFI +YM YMFKYDS HG++K N + L+ + + ++P+EIPW+ G YVVE TGV+ VV++APS DAPMFV+GVNEK+Y P Sbjct: 106 RELTVGINGFGRIGRLVLRVCMEKG-IRVVAVNDPFIDPEYMVYMFKYDSTHGRYKGNVEHKNGQ--LVVDNLEINTYQCKDPKEIPWSSIGNPYVVECTGVYLSIEAASAHISSGARRVVVTAPSPDAPMFVMGVNEKDYNP 245
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P2_DROME (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Drosophila melanogaster GN=Gapdh2 PE=1 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 3.376e-31 Identity = 72/141 (51.06%), Postives = 90/141 (63.83%), Query Frame = 1 Query: 64 KIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486 KIGINGFGRIGRLV R + + +VAVNDPFI +YM Y+FK+DS HG++K + + ++ G+K + VF R+P I WA GAEY+VESTGVFT V+ISAPS DAPMFV GVN YKP+ Sbjct: 3 KIGINGFGRIGRLVLRAAIDKG-ANVVAVNDPFIDVNYMVYLFKFDSTHGRFK-GTVAAEGGFLVVNGQK-ITVFSERDPANINWASAGAEYIVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFVCGVNLDAYKPD 140
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P1_JACOR (Glyceraldehyde-3-phosphate dehydrogenase, muscle OS=Jaculus orientalis PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 5.758e-31 Identity = 73/167 (43.71%), Postives = 93/167 (55.69%), Query Frame = 1 Query: 61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWK-------------------------HNELK--VKDEK-TLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477 +K+G+NGFGRIGRLV R V++VA+NDPFI +YM YMFKYDS HG++K H + K VK E L+ + +F R+P +I W GAEYVVESTGVFT V+ISAPS+DAPMFV+GVN ++Y Sbjct: 2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFKYDSTHGKFKVDIVAINDPFIDLNYMVYMFKYDSTHGKFKGTVKAENGKLVINGHAITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSRDAPMFVMGVNHEKY 168 The following BLAST results are available for this feature:
BLAST of FC931385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 301
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931385 ID=FC931385; Name=FC931385; organism=Citrus clementina; type=EST; length=488bpback to top |