FC931385

Overview
NameFC931385
Unique NameFC931385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length488
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_DICDI (Glyceraldehyde-3-phosphate dehydrogenase OS=Dictyostelium discoideum GN=gpdA PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 1.086e-29
Identity = 64/140 (45.71%), Postives = 86/140 (61.43%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYK 480
            + IGINGFGRIGRLV R  L+  +  ++A+N+PF+   YM YMFKYDS HG++K     +  E   +     + VF  ++P  I W+  GAEY+VESTG+F                VVISAPS DAPM+V+GVNE+ Y+
Sbjct:    3 VPIGINGFGRIGRLVLRASLENPECRVLAINEPFMDVKYMVYMFKYDSTHGRFKGTVEDINGE--FVVNGNKIHVFAEKDPANIKWSSVGAEYIVESTGLFLSTEKAGVHLKGGAKKVVISAPSTDAPMYVMGVNEETYE 140          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_ECHMU (Glyceraldehyde-3-phosphate dehydrogenase OS=Echinococcus multilocularis PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 9.193e-29
Identity = 66/142 (46.48%), Postives = 88/142 (61.97%), Query Frame = 1
Query:   58 KIKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKP 483
            K ++GINGFGRIGRLV R  +  + V +VAVNDPFI  +YM YMFKYDS HG++K  ++KV D   L+     + VF   +   +PW++ GAEY+VESTG+ T               V+ISAPS D+    VGVN ++Y P
Sbjct:    2 KPQVGINGFGRIGRLVLRAAVASNSVNVVAVNDPFIDLEYMVYMFKYDSAHGRYK-GDVKV-DGGKLVIDSHRITVFQEMSASAVPWSQAGAEYIVESTGINTTVEKASAHFQGGAKKVIISAPSADSSHVRVGVNHEKYDP 141          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P1_GIALA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Giardia lamblia GN=GAP1 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.048e-28
Identity = 65/141 (46.10%), Postives = 83/141 (58.87%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKP 483
            I++GINGFGRIGR+  R  L  D V++VA+NDPF   +YM YM KYD+VHG++       +D  T+      ++VF    PEEIPW KT  + V+E TG FT               V+ISAPS DAPMFV G N + Y P
Sbjct:    3 IRLGINGFGRIGRMALRASLNIDGVQVVAINDPFTDCEYMEYMLKYDTVHGRFDGTIAHSEDSITV--NGNKISVFKSMKPEEIPWGKTQVDIVLECTGRFTTKKDAELHITGGCKRVIISAPSADAPMFVCGCNLETYDP 141          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_MESAU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mesocricetus auratus GN=GAPDH PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 5.959e-28
Identity = 64/130 (49.23%), Postives = 82/130 (63.08%), Query Frame = 1
Query:   88 RIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477
            RIGRLV R       V++VA+NDPFI  +YM YMF+YDS HG++K   +K ++ K ++ G K + +F  R+P  I W   GAEYVVESTGVFT               V+ISAPS DAPMFV+GVN  +Y
Sbjct:    1 RIGRLVTRAAFTSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFK-GTVKAENGKLVING-KAITIFQERDPTNIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHDKY 128          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_BOLED (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Boletus edulis GN=GPD PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 5.959e-28
Identity = 63/123 (51.22%), Postives = 78/123 (63.41%), Query Frame = 1
Query:  118 LQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486
            L+  ++ + AVNDPFI  DYM YMFKYDSVHG+++  E+  KD K ++ G K + VF  R+P  IPW   GA+YVVESTGVFT               V+ISAPS DAPMFV GVN   Y P+
Sbjct:    1 LENPEINITAVNDPFIDLDYMVYMFKYDSVHGRFE-GEVSTKDGKLVING-KAITVFAERDPANIPWGTVGAQYVVESTGVFTTIEKASAHLKGGAKKVIISAPSSDAPMFVCGVNLDAYDPK 121          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_SHEEP (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Ovis aries GN=GAPDH PE=2 SV=4)

HSP 1 Score: 122.865 bits (307), Expect = 7.783e-28
Identity = 63/129 (48.84%), Postives = 81/129 (62.79%), Query Frame = 1
Query:   91 IGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477
            IGRLV R       V++VA+NDPFI   YM YMF+YDS HG++ H  +K ++ K ++ G K + +F  R+P  I W   GAEYVVESTGVFT               V+ISAPS DAPMFV+GVN ++Y
Sbjct:    1 IGRLVTRAAFNTGKVDIVAINDPFIDLHYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKKVIISAPSADAPMFVMGVNHEKY 127          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_AMAMU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Amanita muscaria GN=GPD PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.016e-27
Identity = 62/119 (52.10%), Postives = 78/119 (65.55%), Query Frame = 1
Query:  130 DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486
            D+++VA+NDPFI   YM YMFKYDSVHG++    ++ KD K L   +KP+ VF  R+P +IPW   GAEY+VESTGVFT               +VISAPS DAPMFV GVN  +Y P+
Sbjct:    4 DLDVVAINDPFIDLAYMVYMFKYDSVHGRFS-GSVETKDGK-LWINQKPITVFRKRDPVQIPWGSAGAEYIVESTGVFTTTEKASAHLKGGAKKIVISAPSADAPMFVCGVNLDKYDPK 120          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_MASBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Mastigamoeba balamuthi GN=GAPD PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.264e-27
Identity = 67/144 (46.53%), Postives = 88/144 (61.11%), Query Frame = 1
Query:   64 KIGINGFGRIGRLVARVVLQRD-DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNEL--KVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486
            ++GINGFGRIGRLV RV+L R     +V +NDPFI+TD M Y+FKYD+VHG++    +  + K E TL      +AV   +NP EIPW  +  E V+ES+G FT               V+I+APS DAPMFV GVN +  K +
Sbjct:    4 RVGINGFGRIGRLVLRVLLSRGMPANVVLINDPFITTDAMAYIFKYDTVHGRFPGTVVGKEGKLEITLNGHVYDIAVSACKNPAEIPWGASNVEVVIESSGAFTTMEKAHLHQQGGAKKVLITAPSADAPMFVYGVNHQSLKAD 147          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P3_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhizomucor racemosus GN=GPD3 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.264e-27
Identity = 66/139 (47.48%), Postives = 85/139 (61.15%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477
            I  GINGF           L+   V++VA+NDPFI  +YM YMFKYDS HG++K   ++ KD K ++ G + +AV   R+P +IPW   GA+YV+ESTGVFT               V+ISAPS DAPMFVVGVN  +Y
Sbjct:    4 INTGINGFRSHWPYCLACSLENPKVKVVAINDPFIDLEYMVYMFKYDSTHGRFK-GTVEHKDGKLVVNGHE-IAVHAERDPAQIPWGSHGADYVIESTGVFTTKDAASAHLKGGAKKVIISAPSADAPMFVVGVNLDKY 140          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P2_DROSU (Glyceraldehyde-3-phosphate dehydrogenase 2 (Fragment) OS=Drosophila subobscura GN=Gapdh2 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 8.605e-27
Identity = 66/133 (49.62%), Postives = 80/133 (60.15%), Query Frame = 1
Query:   88 RIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486
            RIGRLV R  + +    +VAVNDPFI  +YM Y+FK+DS HG++K     V +   L+   + + VF  R+P  I WA  GAEYVVESTGVFT               VVISAPS DAPMFV GVN   YKP+
Sbjct:    1 RIGRLVLRAAIDKG-ASVVAVNDPFIDVNYMVYLFKFDSTHGRFKGTV--VAEGGFLVVNGQKITVFSERDPANINWASAGAEYVVESTGVFTTIEKASTHLKGGAKKVVISAPSADAPMFVCGVNLDAYKPD 130          
The following BLAST results are available for this feature:
BLAST of FC931385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 301
Match NameE-valueIdentityDescription
G3P_DICDI1.086e-2945.71Glyceraldehyde-3-phosphate dehydrogenase OS=Dictyo... [more]
G3P_ECHMU9.193e-2946.48Glyceraldehyde-3-phosphate dehydrogenase OS=Echino... [more]
G3P1_GIALA2.048e-2846.10Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Giar... [more]
G3P_MESAU5.959e-2849.23Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_BOLED5.959e-2851.22Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_SHEEP7.783e-2848.84Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_AMAMU1.016e-2752.10Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_MASBA2.264e-2746.53Glyceraldehyde-3-phosphate dehydrogenase OS=Mastig... [more]
G3P3_RHIRA2.264e-2747.48Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhiz... [more]
G3P2_DROSU8.605e-2749.62Glyceraldehyde-3-phosphate dehydrogenase 2 (Fragme... [more]

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Properties
Property NameValue
Genbank descriptionC34104E10EF PostHarvP1 Citrus clementina cDNA clone C34104E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931385 ID=FC931385; Name=FC931385; organism=Citrus clementina; type=EST; length=488bp
CGTTAACAAACCTTCACTACTTTCTCATTTTCGATAATATCAATGGCCGG
AGACAAGAAGATTAAGATCGGAATCAACGGTTTCGGAAGGATCGGCCGTT
TGGTTGCGAGAGTCGTACTCCAGAGGGATGATGTGGAGCTGGTGGCTGTC
AACGATCCTTTCATCTCCACTGATTACATGACATACATGTTTAAGTACGA
TAGTGTTCACGGTCAGTGGAAGCACAACGAGTTGAAGGTCAAGGACGAGA
AGACCCTCCTCTTCGGTGAGAAGCCAGTCGCTGTTTTCGGATTCAGGAAC
CCAGAGGAGATCCCATGGGCAAAGACTGGAGCCGAGTATGTTGTGGAATC
AACTGGAGTGTTCACTGACAAGGACAAGGCTGCTGCTCACTTGAAGGGTG
GTGCCAAGAAGGTCGTTATCTCCGCCCCTAGCAAGGATGCTCCCATGTTT
GTTGTGGGCGTCAACGAGAAAGAATACAAGCCAGAGCT
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