FC931385

Overview
NameFC931385
Unique NameFC931385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length488
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3PC_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Gracilaria verrucosa GN=GAPC PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 3.724e-38
Identity = 75/141 (53.19%), Postives = 100/141 (70.92%), Query Frame = 1
Query:   64 KIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486
            ++GINGFGRIGRLV R  +++D + +VA+NDPFI  +YM YMFK+DS HG++    ++ KD K ++ G K + ++G R+P EIPWA+ GA+YVVESTGVFT               V+ISAPSKDAPMFV GVNE +Y P+
Sbjct:    5 QVGINGFGRIGRLVLRAAIEKDTMSVVAINDPFIDLEYMAYMFKFDSTHGRYA-GSVETKDGKLIVNG-KSITIYGHRDPAEIPWAEAGADYVVESTGVFTLKEKAEKHFTGGAKKVIISAPSKDAPMFVCGVNEDKYTPD 143          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_PICAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia angusta GN=GPD PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 3.152e-37
Identity = 74/140 (52.86%), Postives = 94/140 (67.14%), Query Frame = 1
Query:   67 IGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486
            +GINGFGRIGRLV R+ L RDD+ ++A+NDPFI+ DY  YMFKYDS HG++K       + K L+   K + VF  R+P  IPW K G +YV++STGVFT               V+I+APSKDAPMFVVGVN +EY P+
Sbjct:    5 VGINGFGRIGRLVLRIALSRDDINVIAINDPFIAPDYAAYMFKYDSTHGKFKGT--VTHEGKYLVINGKKIEVFQERDPANIPWGKEGVDYVLDSTGVFTTIEGAQKHIDAGAKKVIITAPSKDAPMFVVGVNHEEYTPD 142          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_PARBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=GPD PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 4.117e-37
Identity = 75/142 (52.82%), Postives = 93/142 (65.49%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486
            +K+GINGFGRIGR+V R  ++ DDVE+VAVNDPFI T Y  YM KYDS HGQ+K  +++      L    K +  +  R+P  IPW K G +YVVESTGVFT               V+ISAPS DAPMFV+GVNEK Y+P+
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHDDVEIVAVNDPFIETKYAAYMLKYDSTHGQFK-GDIQHSSSNNLTVNNKTIHFYQERDPANIPWGKHGVDYVVESTGVFTTTEKAKAHLSGGAKKVIISAPSADAPMFVMGVNEKSYRPD 143          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P2_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agaricus bisporus GN=gpd2 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.565e-36
Identity = 78/142 (54.93%), Postives = 98/142 (69.01%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486
            +K+GINGFGRIGR+V R  LQ  D+E+VAVNDPFI  +YM YMFKYDSVHG++K   ++VK+   ++ G +P+ VF  R+P  IPW   GA+YVVESTGVFT               VVISAPS DAPM+V GVN  +Y P+
Sbjct:    2 VKVGINGFGRIGRIVLRNALQFQDIEVVAVNDPFIDLEYMAYMFKYDSVHGRFK-GTVEVKNGSFVVDG-RPMKVFAERDPAAIPWGSVGADYVVESTGVFTTIDKASAHLKGGAKKVVISAPSADAPMYVCGVNLDKYNPK 141          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_ERYGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Erysiphe graminis subsp. hordei GN=GPD PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.669e-36
Identity = 78/139 (56.12%), Postives = 93/139 (66.91%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477
            IK+GINGFGRIGR+V R   Q  +VE+VAVNDPFI  +Y  YM KYDS HGQ+  +   V+D   L+   + V  +  RNPEEIPWA+TGAEY+VESTGVFT               V+ISAPS DAPMFV+GVN K Y
Sbjct:    4 IKVGINGFGRIGRIVFRNAAQSCEVEVVAVNDPFIEPEYAAYMLKYDSTHGQFNGDIQTVEDG--LVVNSRNVKFYNKRNPEEIPWAETGAEYIVESTGVFTTTEKAKAHLKGGAKKVIISAPSADAPMFVMGVNHKSY 140          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_SCHCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Schizophyllum commune GN=GPD PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 3.485e-36
Identity = 76/139 (54.68%), Postives = 97/139 (69.78%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477
            +K+GINGFGRIGR+V R  LQ  ++E+VA+NDPFI+ DYM YMFKYD+VHG++K   ++VKD K ++ G   + VF  +NP +I W   GA+Y+VESTGVFT               VVISAPS DAPMFVVGVN  +Y
Sbjct:    3 VKVGINGFGRIGRIVLRNALQLGNIEVVAINDPFIALDYMVYMFKYDTVHGRYK-GTVEVKDGKLVVDGH-AITVFAEKNPADIKWGSAGADYIVESTGVFTTVEKASLHLQGGAKKVVISAPSADAPMFVVGVNLDKY 139          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_PHARH (Glyceraldehyde-3-phosphate dehydrogenase OS=Phaffia rhodozyma GN=GPD PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 4.552e-36
Identity = 75/142 (52.82%), Postives = 96/142 (67.61%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486
            +K+GINGFGRIGR+V R  +   D+++VA+NDPFI  +YM YMFKYDS HG +K   +++KD K ++ G KP+ V+G R+P  I W   GA+YVVESTGVFT               VVISAPS DAPMFV GVN  +Y P+
Sbjct:    3 VKVGINGFGRIGRIVLRNAIIHGDIDVVAINDPFIDLEYMVYMFKYDSTHGVFK-GSVEIKDGKLVIEG-KPIVVYGERDPANIQWGAAGADYVVESTGVFTTQEKAELHLKGGAKKVVISAPSADAPMFVCGVNLDKYDPK 142          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3PC_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chondrus crispus GN=GAPC PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 4.552e-36
Identity = 74/141 (52.48%), Postives = 94/141 (66.67%), Query Frame = 1
Query:   64 KIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486
            K+GINGFGRIGRLV R  +++   ++VA+NDPFI  DYM YM KYDS HG++   ++ +KD K  + G   + VF  R+P EIPWA   A+Y+VE+TGVFT               VVISAPSKDAPMFV GVNE +Y P+
Sbjct:    5 KVGINGFGRIGRLVLRAAIEKGTCQVVAINDPFIDLDYMAYMLKYDSTHGRYA-GDVSIKDGKLQVDGNS-ITVFAHRDPAEIPWATAAADYIVEATGVFTLKDKAAAHFKGGAKKVVISAPSKDAPMFVCGVNEAKYTPD 143          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_ONCVO (Glyceraldehyde 3-phosphate-dehydrogenase OS=Onchocerca volvulus PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.730e-35
Identity = 78/143 (54.55%), Postives = 95/143 (66.43%), Query Frame = 1
Query:   58 KIKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEK---PVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477
            K KIGINGFGRIGRLV R  +++D VE+VAVNDPFI+ DYM YMFKYDS HG++K   +  +  K ++   K    +AV   ++P EIPW   GAEYVVESTGVFT               V+ISAPS DAPMFV+GVN  +Y
Sbjct:    3 KPKIGINGFGRIGRLVLRAAVEKDTVEVVAVNDPFINIDYMVYMFKYDSTHGRFK-GHVSAEGGKLIVTNGKTTHQIAVHNSKDPAEIPWGVEGAEYVVESTGVFTHTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNDKY 144          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_PICPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia pastoris GN=GPD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.259e-35
Identity = 76/139 (54.68%), Postives = 93/139 (66.91%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477
            I +GINGFGRIGRLV RV L R D+++VA+NDPFI+ +Y  YMFKYDS H  +K  E+     K  + G K + VF  R+P  IPW K G +YV+ESTGVFT               VVI+APSKDAPMFVVGVNE++Y
Sbjct:    3 ITVGINGFGRIGRLVLRVALSRADIKVVAINDPFIAPEYAAYMFKYDSTHKAYK-GEVSASGNKINIDG-KEITVFQERDPVNIPWGKAGVDYVIESTGVFTTLEGAQKHIDAGAKKVVITAPSKDAPMFVVGVNEEKY 139          
The following BLAST results are available for this feature:
BLAST of FC931385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 301
Match NameE-valueIdentityDescription
G3PC_GRAVE3.724e-3853.19Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_PICAN3.152e-3752.86Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P_PARBA4.117e-3752.82Glyceraldehyde-3-phosphate dehydrogenase OS=Paraco... [more]
G3P2_AGABI1.565e-3654.93Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agar... [more]
G3P_ERYGR2.669e-3656.12Glyceraldehyde-3-phosphate dehydrogenase OS=Erysip... [more]
G3P_SCHCO3.485e-3654.68Glyceraldehyde-3-phosphate dehydrogenase OS=Schizo... [more]
G3P_PHARH4.552e-3652.82Glyceraldehyde-3-phosphate dehydrogenase OS=Phaffi... [more]
G3PC_CHOCR4.552e-3652.48Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_ONCVO1.730e-3554.55Glyceraldehyde 3-phosphate-dehydrogenase OS=Onchoc... [more]
G3P_PICPA2.259e-3554.68Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]

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Properties
Property NameValue
Genbank descriptionC34104E10EF PostHarvP1 Citrus clementina cDNA clone C34104E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931385 ID=FC931385; Name=FC931385; organism=Citrus clementina; type=EST; length=488bp
CGTTAACAAACCTTCACTACTTTCTCATTTTCGATAATATCAATGGCCGG
AGACAAGAAGATTAAGATCGGAATCAACGGTTTCGGAAGGATCGGCCGTT
TGGTTGCGAGAGTCGTACTCCAGAGGGATGATGTGGAGCTGGTGGCTGTC
AACGATCCTTTCATCTCCACTGATTACATGACATACATGTTTAAGTACGA
TAGTGTTCACGGTCAGTGGAAGCACAACGAGTTGAAGGTCAAGGACGAGA
AGACCCTCCTCTTCGGTGAGAAGCCAGTCGCTGTTTTCGGATTCAGGAAC
CCAGAGGAGATCCCATGGGCAAAGACTGGAGCCGAGTATGTTGTGGAATC
AACTGGAGTGTTCACTGACAAGGACAAGGCTGCTGCTCACTTGAAGGGTG
GTGCCAAGAAGGTCGTTATCTCCGCCCCTAGCAAGGATGCTCCCATGTTT
GTTGTGGGCGTCAACGAGAAAGAATACAAGCCAGAGCT
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