FC931385

Overview
NameFC931385
Unique NameFC931385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length488
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_PHACH (Glyceraldehyde-3-phosphate dehydrogenase OS=Phanerochaete chrysosporium GN=GPD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.259e-35
Identity = 76/139 (54.68%), Postives = 92/139 (66.19%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477
            +K GINGFGRIGR+V R  L   D+++VAVNDPFI  +YM YMFKYDSVHG++K   ++ KD K  + G KP+ VF  ++P  IPW   GAEY+VESTGVFT               V+ISAPS DAPMFV GVN   Y
Sbjct:    3 VKAGINGFGRIGRIVLRNALLHGDIDVVAVNDPFIDLEYMVYMFKYDSVHGRFK-GSVEAKDGKLYVEG-KPIHVFAEKDPANIPWGSVGAEYIVESTGVFTTTEKASAHLKGVCKKVIISAPSADAPMFVCGVNLDAY 139          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P2_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Trichoderma koningii GN=gpd2 PE=1 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 3.854e-35
Identity = 77/139 (55.40%), Postives = 95/139 (68.35%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477
            IK+GINGFGRIGR+V R  ++  D+E+VAVNDPFI T Y  YM KYDS HG +K  E++V D K L+   K V  +  RNP +I W++TGAEYVVESTGVFT               V+ISAPS DAPM+V+GVNE +Y
Sbjct:    4 IKVGINGFGRIGRIVFRNAVEHPDIEVVAVNDPFIETTYAAYMLKYDSSHGLFK-GEVEV-DGKDLVVNGKKVRFYTERNPADIKWSETGAEYVVESTGVFTTTEKAKAHLVGGAKKVIISAPSADAPMYVMGVNESDY 140          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_PONAB (Glyceraldehyde-3-phosphate dehydrogenase OS=Pongo abelii GN=GAPDH PE=2 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 5.033e-35
Identity = 72/140 (51.43%), Postives = 94/140 (67.14%), Query Frame = 1
Query:   58 KIKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477
            K+K+GINGFGRIGRLV R       V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G  P+ +F  R+P +I W   GAEYVVESTGVFT               V+ISAPS DAPMFV+GVN ++Y
Sbjct:    3 KVKVGINGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-NPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKY 140          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_PLESA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pleurotus sajor-caju GN=GPD PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 6.573e-35
Identity = 76/142 (53.52%), Postives = 96/142 (67.61%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486
            + +GINGFGRIGR+V R  L+   V++VA+NDPFI  DYM YMFKYDSVHG++K   ++ KD K ++ G KP+ +F  ++P  IPW   GA+YVVESTGVFT               VVISAPS DAPMFV GVN + Y P+
Sbjct:    2 VNVGINGFGRIGRIVFRNALEVGGVDVVAINDPFIDLDYMVYMFKYDSVHGRFK-GSIEAKDGKLIVEG-KPIHIFAEKDPANIPWGSVGADYVVESTGVFT-TIDKASAHLKGGEKVVISAPSADAPMFVCGVNLETYDPK 140          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Homo sapiens GN=GAPDH PE=1 SV=3)

HSP 1 Score: 146.362 bits (368), Expect = 6.573e-35
Identity = 71/140 (50.71%), Postives = 94/140 (67.14%), Query Frame = 1
Query:   58 KIKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477
            K+K+G+NGFGRIGRLV R       V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G  P+ +F  R+P +I W   GAEYVVESTGVFT               V+ISAPS DAPMFV+GVN ++Y
Sbjct:    3 KVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-NPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKY 140          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_PANVR (Glyceraldehyde-3-phosphate dehydrogenase OS=Panulirus versicolor PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 8.585e-35
Identity = 77/141 (54.61%), Postives = 95/141 (67.38%), Query Frame = 1
Query:   64 KIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486
            KIGINGFGRIGRLV R  L+    ++VAVNDPFI+ +YM YMFKYDS HG +K  E+K +D   ++ G+K + VF    PE IPW+K GAEY+VESTGVFT               V+ISAPS DAPMFV GVN ++Y  +
Sbjct:    2 KIGINGFGRIGRLVLRAALEMG-AQVVAVNDPFIALEYMVYMFKYDSTHGMFK-GEVKAEDGALVVDGKK-ITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSADAPMFVCGVNLEKYSKD 139          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_LYOSH (Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophyllum shimeji GN=GPD PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.121e-34
Identity = 73/142 (51.41%), Postives = 95/142 (66.90%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486
            + +GINGFGRIGR+V R  L    +++VA+NDPFI+ +YM YMFKYDSVHG++K   ++ KD K  + G KPV V+G +NP +I W   G +YVVESTGVFT               V+ISAPS DAPMFV+G N  +Y P+
Sbjct:    2 VNVGINGFGRIGRIVFRNALLNPKIQVVAINDPFINLEYMVYMFKYDSVHGRFK-GTVEAKDGKLWIQG-KPVIVYGEKNPSDIKWGAAGRDYVVESTGVFTTVEKAEGHLKGGAKKVIISAPSADAPMFVMGCNLDQYDPK 141          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_FELCA (Glyceraldehyde-3-phosphate dehydrogenase OS=Felis catus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 1.121e-34
Identity = 71/139 (51.08%), Postives = 93/139 (66.91%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477
            +K+G+NGFGRIGRLV R       V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G KP+ +F  R+P  I W   GAEYVVESTGVFT               V+ISAPS DAPMFV+GVN ++Y
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_COCHE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cochliobolus heterostrophus GN=GPD1 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.121e-34
Identity = 75/142 (52.82%), Postives = 94/142 (66.20%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486
            +K+GINGFGRIGR+V R  ++ +DV++VAVNDPFI   Y  YM KYDS HGQ+K  ++KV D   L    K +     ++P  IPW++TGA YVVESTGVFT               VVISAPS DAPMFV+GVN + YKP+
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHNDVDIVAVNDPFIEPHYAAYMLKYDSTHGQFK-GDIKV-DGNNLTVNGKTIRFHMEKDPANIPWSETGAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSPDAPMFVMGVNHETYKPD 142          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_TRISI (Glyceraldehyde-3-phosphate dehydrogenase OS=Trionyx sinensis GN=GAPDH PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.464e-34
Identity = 73/139 (52.52%), Postives = 93/139 (66.91%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477
            +KIG+NGFGRIGRLV R     D V++VA+NDPFI  +YM YMFKYDS HG++ H  +K ++ K ++ G+  + +F  R+P  I W   GAEYVVESTGVFT               VVISAPS DAPMFV+GVN ++Y
Sbjct:    2 VKIGVNGFGRIGRLVTRAAFTCDKVQIVAINDPFIDLNYMVYMFKYDSTHGRF-HGTVKAENGKLVINGQ-AITIFQERDPANIKWGDAGAEYVVESTGVFTTTEKASAHLKGGAKRVVISAPSADAPMFVMGVNHEKY 138          
The following BLAST results are available for this feature:
BLAST of FC931385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 301
Match NameE-valueIdentityDescription
G3P_PHACH2.259e-3554.68Glyceraldehyde-3-phosphate dehydrogenase OS=Phaner... [more]
G3P2_TRIKO3.854e-3555.40Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Tric... [more]
G3P_PONAB5.033e-3551.43Glyceraldehyde-3-phosphate dehydrogenase OS=Pongo ... [more]
G3P_PLESA6.573e-3553.52Glyceraldehyde-3-phosphate dehydrogenase OS=Pleuro... [more]
G3P_HUMAN6.573e-3550.71Glyceraldehyde-3-phosphate dehydrogenase OS=Homo s... [more]
G3P_PANVR8.585e-3554.61Glyceraldehyde-3-phosphate dehydrogenase OS=Panuli... [more]
G3P_LYOSH1.121e-3451.41Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophy... [more]
G3P_FELCA1.121e-3451.08Glyceraldehyde-3-phosphate dehydrogenase OS=Felis ... [more]
G3P_COCHE1.121e-3452.82Glyceraldehyde-3-phosphate dehydrogenase OS=Cochli... [more]
G3P_TRISI1.464e-3452.52Glyceraldehyde-3-phosphate dehydrogenase OS=Triony... [more]

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Properties
Property NameValue
Genbank descriptionC34104E10EF PostHarvP1 Citrus clementina cDNA clone C34104E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931385 ID=FC931385; Name=FC931385; organism=Citrus clementina; type=EST; length=488bp
CGTTAACAAACCTTCACTACTTTCTCATTTTCGATAATATCAATGGCCGG
AGACAAGAAGATTAAGATCGGAATCAACGGTTTCGGAAGGATCGGCCGTT
TGGTTGCGAGAGTCGTACTCCAGAGGGATGATGTGGAGCTGGTGGCTGTC
AACGATCCTTTCATCTCCACTGATTACATGACATACATGTTTAAGTACGA
TAGTGTTCACGGTCAGTGGAAGCACAACGAGTTGAAGGTCAAGGACGAGA
AGACCCTCCTCTTCGGTGAGAAGCCAGTCGCTGTTTTCGGATTCAGGAAC
CCAGAGGAGATCCCATGGGCAAAGACTGGAGCCGAGTATGTTGTGGAATC
AACTGGAGTGTTCACTGACAAGGACAAGGCTGCTGCTCACTTGAAGGGTG
GTGCCAAGAAGGTCGTTATCTCCGCCCCTAGCAAGGATGCTCCCATGTTT
GTTGTGGGCGTCAACGAGAAAGAATACAAGCCAGAGCT
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