FC931385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_RAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus GN=Gapdh PE=1 SV=3) HSP 1 Score: 144.821 bits (364), Expect = 1.912e-34 Identity = 71/139 (51.08%), Postives = 94/139 (67.63%), Query Frame = 1 Query: 61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477 +K+G+NGFGRIGRLV R D V++VA+NDPFI +YM YMF+YDS HG++ + +K ++ K ++ G KP+ +F R+P I W GAEYVVESTGVFT V+ISAPS DAPMFV+GVN ++Y Sbjct: 2 VKVGVNGFGRIGRLVTRAAFSCDKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-NGTVKAENGKLVING-KPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_PICCI (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia ciferrii GN=GPD PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.912e-34 Identity = 71/142 (50.00%), Postives = 96/142 (67.61%), Query Frame = 1 Query: 61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486 I +GINGFGRIGRLV R+ L R D+++VA+NDPFI+ +Y +YMFKYDS HG++ E+ + E ++ G+K + V+ R+P IPW K G +YV++STGVF VVI+APS APMFVVGVNE +Y P+ Sbjct: 3 ITVGINGFGRIGRLVLRIALSRKDIQIVAINDPFIAPEYASYMFKYDSTHGRYS-GEVSHEGENIVIDGKK-IRVYQERDPVNIPWGKDGVDYVIDSTGVFKELDSAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKYTPD 142
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus GN=Gapdh PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 2.498e-34 Identity = 71/139 (51.08%), Postives = 95/139 (68.35%), Query Frame = 1 Query: 61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477 +K+G+NGFGRIGRLV R + VE+VA+NDPFI +YM YMF+YDS HG++ + +K ++ K ++ G KP+ +F R+P I W + GAEYVVESTGVFT V+ISAPS DAPMFV+GVN ++Y Sbjct: 2 VKVGVNGFGRIGRLVTRAAICSGKVEIVAINDPFIDLNYMVYMFQYDSTHGKF-NGTVKAENGKLVING-KPITIFQERDPTNIKWGEAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_HOMAM (Glyceraldehyde-3-phosphate dehydrogenase OS=Homarus americanus PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 2.498e-34 Identity = 78/141 (55.32%), Postives = 95/141 (67.38%), Query Frame = 1 Query: 64 KIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486 KIGINGFGRIGRLV R L ++VAVNDPFI+ +YM YMFKYDS HG +K E+K++D ++ G+K + VF PE IPW+K GAEY+VESTGVFT VVISAPS DAPMFV GVN ++Y + Sbjct: 2 KIGINGFGRIGRLVLRAALSCG-AQVVAVNDPFIALEYMVYMFKYDSTHGVFK-GEVKMEDGALVVDGKK-ITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVVISAPSADAPMFVCGVNLEKYSKD 139
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_BRUMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia malayi GN=G3PD PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.498e-34 Identity = 75/143 (52.45%), Postives = 94/143 (65.73%), Query Frame = 1 Query: 58 KIKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKP---VAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477 K K+GINGFGRIGRLV R +++D V++VAVNDPFI+ DYM YMFKYDS HG++K + + K ++ K ++V ++P EIPW GAEYVVESTGVFT V+ISAPS DAPMFV+GVN Y Sbjct: 3 KPKVGINGFGRIGRLVLRAAVEKDTVDVVAVNDPFINIDYMVYMFKYDSTHGRFK-GSVSAEGGKLIVTNGKTTHHISVHNSKDPAEIPWGVDGAEYVVESTGVFTTTDKASAHLKGGAKKVIISAPSADAPMFVMGVNNDMY 144
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P1_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces lactis GN=GAP1 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.498e-34 Identity = 74/142 (52.11%), Postives = 93/142 (65.49%), Query Frame = 1 Query: 61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486 +K+ INGFGRIGRLV R+ LQR +E+VAVNDPFIS DY YMFKYDS HG++K E+ ++ G K +AVF ++P +PW K G + V++STGVF VVI+APSK APMFVVGVNE +Y E Sbjct: 2 VKVAINGFGRIGRLVLRIALQRKALEVVAVNDPFISVDYAAYMFKYDSTHGRYK-GEVTTSGNDLVIDGHK-IAVFQEKDPANLPWGKLGVDIVIDSTGVFKELDSAQKHLDAGAKKVVITAPSKTAPMFVVGVNEDKYNGE 141
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_ONCMY (Glyceraldehyde-3-phosphate dehydrogenase OS=Oncorhynchus mykiss GN=gapdh PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 3.262e-34 Identity = 74/139 (53.24%), Postives = 94/139 (67.63%), Query Frame = 1 Query: 67 IGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKP 483 +GINGFGRIGRLV R LQ+ +++VA+NDPFI YM YMFKYDS HG++K E+ ++D K L+ + ++VF P EIPW K GA+YVVESTGVF VV+SAPS DAPMFV+GVNE ++ P Sbjct: 6 VGINGFGRIGRLVLRACLQKG-IKVVAINDPFIDLQYMVYMFKYDSTHGRYK-GEVSMEDGK-LIVDDHSISVFQCMKPHEIPWGKAGADYVVESTGVFLSIDKASSHIQGGAKRVVVSAPSPDAPMFVMGVNEDKFDP 141
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_CURLU (Glyceraldehyde-3-phosphate dehydrogenase OS=Curvularia lunata GN=GPD PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 3.262e-34 Identity = 76/142 (53.52%), Postives = 93/142 (65.49%), Query Frame = 1 Query: 61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486 +K+GINGFGRIGR+V R ++ +DVE+VAVNDPFI Y YM KYDS HGQ+K ++KV D L K V ++P IPW++TGA YVVESTGVFT VVISAPS DAPMFV+GVN + YK + Sbjct: 3 VKVGINGFGRIGRIVFRNAIEHNDVEIVAVNDPFIEPHYAAYMLKYDSTHGQFK-GDIKV-DGNNLTVNGKTVRFHMEKDPANIPWSETGAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSADAPMFVMGVNHETYKSD 142
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_COCIM (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides immitis GN=GPD PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 3.262e-34 Identity = 74/142 (52.11%), Postives = 95/142 (66.90%), Query Frame = 1 Query: 61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486 +K+GINGFGRIGR+V R ++ +VE+VAVNDPFI T Y YM KYDS HG++K ++K D + G K V + R+P IPWA+TGA+YV+ESTGVFT V+ISAPS DAPMFV+GVN + YK + Sbjct: 3 VKVGINGFGRIGRIVFRNAVEHPEVEIVAVNDPFIETHYAAYMLKYDSTHGRFK-GDVKFSDNGLDVDG-KHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNETYKSD 142
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P1_GLORO (Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragment) OS=Globodera rostochiensis GN=GPD-1 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 3.262e-34 Identity = 75/148 (50.68%), Postives = 93/148 (62.84%), Query Frame = 1 Query: 58 KIKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEK------PVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKP 483 K K+GINGFGRIGRL R +++D V++VA+NDPFI DYM YMF YDS HG++ K+ L EK + VF ++P EI WA+ GAEYV+ESTGVFT VVISAPS DAPM+V+GVNE +Y P Sbjct: 3 KPKVGINGFGRIGRLALRAAVEKDTVQVVAINDPFIELDYMVYMFNYDSTHGRFNG---KISTSAGNLVVEKEGKATHTIKVFNLKDPAEIKWAEVGAEYVIESTGVFTTIEKASAHLKGGAKKVVISAPSADAPMYVMGVNEDKYDP 147 The following BLAST results are available for this feature:
BLAST of FC931385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 301
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931385 ID=FC931385; Name=FC931385; organism=Citrus clementina; type=EST; length=488bpback to top |