FC931385

Overview
NameFC931385
Unique NameFC931385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length488
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_COLLN (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum lindemuthianum GN=GPDA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 5.564e-34
Identity = 75/139 (53.96%), Postives = 90/139 (64.75%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477
            IK+GINGFGRIGR+V R  ++  DVE+VAVNDPFI T Y  YM KYDS HG +  N    +D   L+   K V  +  R+P  IPW +TGA+YVVESTGVFT               V+ISAPS DAPM+V+GVNEK Y
Sbjct:    4 IKVGINGFGRIGRIVFRNAVEHPDVEIVAVNDPFIETKYAAYMLKYDSTHGIF--NGEIAQDGNDLVINGKKVKFYTERDPAVIPWKETGADYVVESTGVFTTIDKAKAHLQGGAKKVIISAPSADAPMYVMGVNEKSY 140          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_SPECI (Glyceraldehyde-3-phosphate dehydrogenase OS=Spermophilus citellus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 7.267e-34
Identity = 70/139 (50.36%), Postives = 93/139 (66.91%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477
            +K+G+NGFGRIGRLV R       V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G K +++F  R+P  I W   GAEYVVESTGVFT               V+ISAPS DAPMFV+GVN ++Y
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_MUSPF (Glyceraldehyde-3-phosphate dehydrogenase OS=Mustela putorius furo GN=GAPDH PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 7.267e-34
Identity = 70/139 (50.36%), Postives = 93/139 (66.91%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477
            +K+G+NGFGRIGRLV R       V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G K +++F  R+P  I W   GAEYVVESTGVFT               V+ISAPS DAPMFV+GVN ++Y
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_CANFA (Glyceraldehyde-3-phosphate dehydrogenase OS=Canis familiaris GN=GAPDH PE=2 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 7.267e-34
Identity = 70/139 (50.36%), Postives = 93/139 (66.91%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 477
            +K+G+NGFGRIGRLV R       V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G K +++F  R+P  I W   GAEYVVESTGVFT               V+ISAPS DAPMFV+GVN ++Y
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_ASPOR (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus oryzae GN=gpdA PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 7.267e-34
Identity = 73/141 (51.77%), Postives = 92/141 (65.25%), Query Frame = 1
Query:   64 KIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486
            K+GINGFGRIGR+V R  +   DV++VAVNDPFI T Y  YM KYDS HG+++   ++  DE  ++ G+K +  F  R+P  IPW   GA Y+VESTGVFT               V+ISAPS DAPMFV+GVN KEYK +
Sbjct:    5 KVGINGFGRIGRIVFRNAIASGDVDVVAVNDPFIETHYAAYMLKYDSTHGRFQ-GTIETYDEGLIVNGKK-IRFFAERDPAAIPWGSAGAAYIVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNKEYKTD 143          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_AJECA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ajellomyces capsulata GN=GPD PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 7.267e-34
Identity = 75/141 (53.19%), Postives = 89/141 (63.12%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKP 483
            +K+GINGFGRIGR+V R  ++  +V +VAVNDPFI T Y  YM KYDS HGQ+K   + V      + G K V  +  R+P  IPW K G EYVVESTGVFT               V+ISAPS DAPMFV+GVNEK Y P
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHGEVNVVAVNDPFIETHYAAYMLKYDSTHGQFK-GTIDVNSNGLTVNG-KAVTFYQERDPASIPWGKHGVEYVVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNEKTYDP 141          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_SCLSC (Glyceraldehyde-3-phosphate dehydrogenase OS=Sclerotinia sclerotiorum GN=GPD PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 9.492e-34
Identity = 74/141 (52.48%), Postives = 95/141 (67.38%), Query Frame = 1
Query:   64 KIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486
            K+GINGFGRIGR+V R  ++ DD+++VAVNDPFI T+Y  YM KYDS HGQ+K  ++KV  +   + G+K V  +  R+P  IPWA++ A YVVESTGVFT               VVISAPS DAPM+V+GVN + Y  E
Sbjct:    5 KVGINGFGRIGRIVFRNAIEHDDIDIVAVNDPFIETEYAAYMLKYDSTHGQFK-GDIKVLSDGLEVNGKK-VKFYTERDPANIPWAESEAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSADAPMYVMGVNNETYNGE 143          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P_COCP7 (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides posadasii (strain C735) GN=GPD PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 9.492e-34
Identity = 74/142 (52.11%), Postives = 94/142 (66.20%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486
            +K+GINGFGRIGR+V R  ++  +VE+VAVNDPFI T Y  YM KYDS HG++K  ++K   E  L    K V  +  R+P  IPWA+TGA+YV+ESTGVFT               V+ISAPS DAPMFV+GVN + YK +
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHPEVEIVAVNDPFIETHYAAYMLKYDSTHGRFK-GDVKF-SENGLDVDGKHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNETYKSD 142          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P1_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schizosaccharomyces pombe GN=tdh1 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 9.492e-34
Identity = 70/140 (50.00%), Postives = 96/140 (68.57%), Query Frame = 1
Query:   64 KIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKP 483
            K+GINGFGRIGR+V R  L    +++VA+NDPFI  +YM YMFKYDS HG++    +++KD K ++ G   + V   R+P +I W+ +GA+YV+ESTGVFT               V+ISAPSKDAPM+VVGVNE+++ P
Sbjct:    5 KVGINGFGRIGRIVLRNALVAKTIQVVAINDPFIDLEYMAYMFKYDSTHGRF-DGSVEIKDGKLVIDG-NAIDVHNERDPADIKWSTSGADYVIESTGVFTTQETASAHLKGGAKRVIISAPSKDAPMYVVGVNEEKFNP 142          
BLAST of FC931385 vs. ExPASy Swiss-Prot
Match: G3P1_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces marxianus GN=GAP1 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 9.492e-34
Identity = 73/142 (51.41%), Postives = 92/142 (64.79%), Query Frame = 1
Query:   61 IKIGINGFGRIGRLVARVVLQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 486
            + I INGFGRIGRLV R+ L+R ++++VA+NDPFIS DY  YMFKYDS HG++K  E+   D   L+   K VAVF  ++P  +PW K G +  V+STGVF                VVI+APSK APMFVVGVNE +Y  E
Sbjct:    2 VSIAINGFGRIGRLVLRIALERKNIDVVAINDPFISVDYAAYMFKYDSTHGKYK-GEVS-HDGSNLIINGKKVAVFQEKDPATLPWGKLGVDIAVDSTGVFKELDSAQKHIDAGAKKVVITAPSKTAPMFVVGVNEDKYNGE 141          
The following BLAST results are available for this feature:
BLAST of FC931385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 301
Match NameE-valueIdentityDescription
G3P_COLLN5.564e-3453.96Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P_SPECI7.267e-3450.36Glyceraldehyde-3-phosphate dehydrogenase OS=Spermo... [more]
G3P_MUSPF7.267e-3450.36Glyceraldehyde-3-phosphate dehydrogenase OS=Mustel... [more]
G3P_CANFA7.267e-3450.36Glyceraldehyde-3-phosphate dehydrogenase OS=Canis ... [more]
G3P_ASPOR7.267e-3451.77Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3P_AJECA7.267e-3453.19Glyceraldehyde-3-phosphate dehydrogenase OS=Ajello... [more]
G3P_SCLSC9.492e-3452.48Glyceraldehyde-3-phosphate dehydrogenase OS=Sclero... [more]
G3P_COCP79.492e-3452.11Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P1_SCHPO9.492e-3450.00Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schi... [more]
G3P1_KLUMA9.492e-3451.41Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]

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Properties
Property NameValue
Genbank descriptionC34104E10EF PostHarvP1 Citrus clementina cDNA clone C34104E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931385 ID=FC931385; Name=FC931385; organism=Citrus clementina; type=EST; length=488bp
CGTTAACAAACCTTCACTACTTTCTCATTTTCGATAATATCAATGGCCGG
AGACAAGAAGATTAAGATCGGAATCAACGGTTTCGGAAGGATCGGCCGTT
TGGTTGCGAGAGTCGTACTCCAGAGGGATGATGTGGAGCTGGTGGCTGTC
AACGATCCTTTCATCTCCACTGATTACATGACATACATGTTTAAGTACGA
TAGTGTTCACGGTCAGTGGAAGCACAACGAGTTGAAGGTCAAGGACGAGA
AGACCCTCCTCTTCGGTGAGAAGCCAGTCGCTGTTTTCGGATTCAGGAAC
CCAGAGGAGATCCCATGGGCAAAGACTGGAGCCGAGTATGTTGTGGAATC
AACTGGAGTGTTCACTGACAAGGACAAGGCTGCTGCTCACTTGAAGGGTG
GTGCCAAGAAGGTCGTTATCTCCGCCCCTAGCAAGGATGCTCCCATGTTT
GTTGTGGGCGTCAACGAGAAAGAATACAAGCCAGAGCT
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