FC931387

Overview
NameFC931387
Unique NameFC931387
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_BACTN (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Bacteroides thetaiotaomicron GN=purC PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.227e-17
Identity = 50/113 (44.25%), Postives = 67/113 (59.29%), Query Frame = 1
Query:  328 TNLHLTVPGLKSKTRGKVRDIYD-GGDYLVLVTTDRQSAFDRILAS-IPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVY 660
            T      PG KS   GKVRD+Y+  G+ LV+V TDR SAFD +L   IP+KGQ+LN+ +  + D T  I PN  +++PD  VT+   C   PVE +VRG++ GS     W  Y
Sbjct:    5 TKTDFNFPGQKSVYHGKVRDVYNINGEKLVMVATDRISAFDVVLPEGIPYKGQMLNQIAAKFLDATTDICPNWKMATPDPMVTVGVLCEGFPVEMIVRGYLCGSA----WRTY 113          
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_CYTH3 (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=purC PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17
Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 1
Query:  313 NRLSETNLHLTVPGLKSKTRGKVRDIYDGGDYLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTG 630
            N + ET   L  PG     +GKVRD+Y   D LV+V +DR SAFD +L  +IPFKGQVLN+ +     QT  + PN ++S PD +V+I  KC    VE V+RG++ G
Sbjct:    2 NAIKETRFEL--PGQTGFYKGKVRDVYYVADKLVVVASDRISAFDVVLPRAIPFKGQVLNQIAAKMLAQTADVVPNWILSVPDPSVSIGIKCEPFKVEMVIRGYLAG 106          
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_GEOSL (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Geobacter sulfurreducens GN=purC PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17
Identity = 53/121 (43.80%), Postives = 70/121 (57.85%), Query Frame = 1
Query:  319 LSETNLHLTVPGLKSKTRGKVRDIYDGGDYLVLVTTDRQSAFDRIL-ASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNV---------------TIAKKCSVIPVEFVVRGFVTGS 633
            ++E  L    P LK   RGKVRDIYD GD L++VTTDR SAFD I+  +IP KG VL + S +WF Q   I PN +IS+  K+                 + KK   +PVE +VRG+++GS
Sbjct:    1 MAELVLKTDFPDLKLAGRGKVRDIYDLGDALLIVTTDRISAFDVIMNEAIPDKGYVLTQISSFWFRQMEDIIPNHIISTDVKDFPAECQKYAAQLEGRSMLVKKAKPLPVECIVRGYISGS 121          
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_FLAPJ (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=purC PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.089e-17
Identity = 47/108 (43.52%), Postives = 70/108 (64.81%), Query Frame = 1
Query:  313 NRLSETNLHLTVPGLKSKTRGKVRDIYDGGD-YLVLVTTDRQSAFDRILAS-IPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTG 630
            N ++ TN +   P  KS  RGKVR++Y+  D  LV+V TDR SAFD +L   IP+KGQ+LN+ +  + + T+ I PN +I++PD NV +   C    VE V+RG+++G
Sbjct:    2 NTITTTNFNF--PNQKSVYRGKVREVYNINDELLVMVATDRLSAFDVVLPEGIPYKGQILNQIATKFMELTQDIVPNWLIATPDPNVAVGHLCEPFKVEMVIRGYLSG 107          
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_AZOPC (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=purC PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.357e-16
Identity = 48/108 (44.44%), Postives = 65/108 (60.19%), Query Frame = 1
Query:  373 GKVRDIYD-GGDYLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYIKASEIIVAM 690
            GKVRD+Y  G D LV++ TDR SAFD +L+  IP+KGQVLN+ +  + D T  I PN  ++ PD  VTI   C    VE V+RG++TGS     W  Y +    + A+
Sbjct:   20 GKVRDVYTVGSDMLVIIATDRISAFDVVLSRGIPYKGQVLNQIAAKFLDSTSDILPNWKLAEPDPMVTIGLLCEPFKVEMVIRGYLTGSA----WRKYKEGERTLCAV 123          
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_PELPD (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Pelobacter propionicus (strain DSM 2379) GN=purC PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.314e-16
Identity = 54/121 (44.63%), Postives = 70/121 (57.85%), Query Frame = 1
Query:  319 LSETNLHLTVPGLKSKTRGKVRDIYDGGDYLVLVTTDRQSAFDRIL-ASIPFKGQVLNETSLWWFDQTRHITPNAVISS----------PDKNV-----TIAKKCSVIPVEFVVRGFVTGS 633
            +S   +H   PGLK   RGKVRDIYD G+ L+LVT+DR SAFD I+   IP KG VL E S +WF Q   I  N +IS+          P  ++      + KK   +PVE +VRG+V+GS
Sbjct:    1 MSHPVMHTDFPGLKLLARGKVRDIYDLGETLLLVTSDRISAFDVIMNEPIPDKGFVLTEISSFWFRQMEDIVSNHIISTDVDEFPAACRPHADLLRGRSMLVKKARPLPVECIVRGYVSGS 121          
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_THEYD (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=purC PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.022e-16
Identity = 54/140 (38.57%), Postives = 77/140 (55.00%), Query Frame = 1
Query:  307 LSNRLSETNLHLTVPGLKSKTRGKVRDIYDGGDYLVLVTTDRQSAFDRIL-ASIPFKGQVLNETSLWWFDQTRHITPNAVISSP---------------DKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYIKASEI 678
            + N + ETNL     G+K   RGKVRDIY+  DYL++V TDR SAFD +L   IP KG++L + SL+WFD+ + I  N ++S+                +    + KK   +PVE +VRG+++GS     W  Y K   I
Sbjct:    1 MKNVVLETNLK----GVKLLRRGKVRDIYEIEDYLLIVATDRVSAFDVVLPTGIPEKGKILTQISLFWFDKVKDIVENHLVSANADEFPEPLPAYKEILEGRSMLVKKAKPLPVECIVRGYLSGSG----WKDYQKTGMI 132          
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_GEOUR (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Geobacter uraniireducens (strain Rf4) GN=purC PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.947e-16
Identity = 51/121 (42.15%), Postives = 68/121 (56.20%), Query Frame = 1
Query:  319 LSETNLHLTVPGLKSKTRGKVRDIYDGGDYLVLVTTDRQSAFDRIL-ASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNV---------------TIAKKCSVIPVEFVVRGFVTGS 633
            +S+  L    P LK   RGKVRDIYD G+ L++VTTDR SAFD I+   IP KG VL + S +WF Q   I PN +IS+  K+                 + KK   +P E +VRG+++GS
Sbjct:    1 MSKLVLTTDFPDLKLAARGKVRDIYDLGETLLIVTTDRISAFDVIMNEGIPDKGYVLTQISAFWFRQMEDIIPNHIISTEVKDFPAECQKYADVLEGRSMLVKKAKPLPAECIVRGYISGS 121          
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_GEOMG (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=purC PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16
Identity = 49/111 (44.14%), Postives = 65/111 (58.56%), Query Frame = 1
Query:  349 PGLKSKTRGKVRDIYDGGDYLVLVTTDRQSAFDRIL-ASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNV---------------TIAKKCSVIPVEFVVRGFVTGS 633
            P LK   RGKVRDIYD G+ L++VTTDR SAFD I+   IP KG VL + S +WF Q   I PN +IS+  K+                 + KK + +P E +VRG+++GS
Sbjct:   11 PDLKLVARGKVRDIYDLGEALLIVTTDRISAFDVIMNEGIPDKGYVLTQISAFWFRQMEDIIPNHIISTEVKDFPAECQKYAADLEGRSMLVKKANPLPAECIVRGYISGS 121          
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_DESOH (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=purC PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.500e-15
Identity = 47/115 (40.87%), Postives = 65/115 (56.52%), Query Frame = 1
Query:  337 HLTVPGLKSKTRGKVRDIYDGGDYLVLVTTDRQSAFDRILAS-IPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNV---------------TIAKKCSVIPVEFVVRGFVTGS 633
            H   PGL    RGKVRD+YD GD L++V TDR SAFD ++   IP KG++L + SL+WFDQ + I  N +ISS   +                 +  K   + +E VVRG+++GS
Sbjct:    7 HTDFPGLNLLKRGKVRDVYDFGDRLLIVATDRLSAFDVVMPDPIPGKGEILTQISLFWFDQVKDIVRNHLISSDVNDYPEACRPYAETLAGRSMLVTKTEPLAIECVVRGYLSGS 121          
The following BLAST results are available for this feature:
BLAST of FC931387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
PUR7_BACTN1.227e-1744.25Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_CYTH32.093e-1745.79Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_GEOSL4.662e-1743.80Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_FLAPJ6.089e-1743.52Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_AZOPC1.357e-1644.44Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_PELPD2.314e-1644.63Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_THEYD3.022e-1638.57Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_GEOUR3.947e-1642.15Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_GEOMG6.733e-1644.14Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_DESOH1.500e-1540.87Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]

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Properties
Property NameValue
Genbank descriptionC34104E12EF PostHarvP1 Citrus clementina cDNA clone C34104E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931387 ID=FC931387; Name=FC931387; organism=Citrus clementina; type=EST; length=702bp
GAAAATTTCAAAGCAACAATGGCTGAGTGTATGCGTACAACCTTAAACCC
TCCAAAAACCCCACTTCACAGCAACAAAATCTCAGCTCCAAAACTCTCAT
TCTCATCTTCTTTCTCTTCATTTGGAACAAAACCCAATTCTTCTAATTCA
AACAATTATCCAAGAATCTCTCTATCTGTCATGTCCAACAAGAGCCAGAA
CCAGAACCAGAACCAAAACCACCACCACCACCAACAACACTTGTCTCTTG
ATGCTGTGATTAGCAGCAATCGCAAAGCAGAGCTTCTTGGTGACATCAAA
GGCTCGCTTTCGAACCGTCTCTCCGAGACAAATCTTCACTTGACTGTTCC
CGGTCTCAAATCCAAAACCAGGGGCAAGGTGAGAGATATTTATGATGGCG
GGGATTATCTTGTTCTGGTGACAACGGACCGCCAAAGTGCGTTCGATAGA
ATTCTTGCTTCTATTCCCTTCAAAGGCCAGGTTCTTAATGAAACGAGTTT
GTGGTGGTTTGATCAAACTAGGCACATAACTCCAAATGCAGTCATTTCAT
CTCCAGATAAAAATGTTACAATTGCGAAGAAGTGTTCTGTTATCCCTGTT
GAATTTGTAGTCAGAGGTTTTGTGACTGGAAGTACTGATACCTCTCTGTG
GACGGTTTACATAAAGGCATCCGAAATTATTGTGGCAATGCTCTTCAGAT
GG
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