FC931387

Overview
NameFC931387
Unique NameFC931387
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_PELCD (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=purC PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 43/116 (37.07%), Postives = 66/116 (56.90%), Query Frame = 1
Query:  334 LHLTVPGLKSKTRGKVRDIYDGGDYLVLVTTDRQSAFDRIL-ASIPFKGQVLNETSLWWFDQTRHITPNAVISSP---------------DKNVTIAKKCSVIPVEFVVRGFVTGS 633
            L    P LK   +GKVRDIYD G++L++VT+DR SAFD ++   IP+KG VL + S +WFD    I P+ ++S+                +    + +K   +P+E +VRG++ GS
Sbjct:    6 LQTDFPNLKLVNKGKVRDIYDLGEHLLIVTSDRISAFDVVMNEGIPYKGFVLTQISKFWFDAFSDIVPHHLVSTEVDDFPAETRPYRDQLEGRSMLVRKAEPLPIECIVRGYLAGS 121          
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_SYNFM (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=purC PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 52/131 (39.69%), Postives = 69/131 (52.67%), Query Frame = 1
Query:  334 LHLTVPGLKSKTRGKVRDIYDGGDYLVLVTTDRQSAFDRILAS-IPFKGQVLNETSLWWFDQTRHITPNAVISS----------PDKNVTI-----AKKCSVIPVEFVVRGFVTGSTDTSLWTVYIKASEI 678
            L    PGLK   RGKVRDIYD GD L++V TDR SAFD I+ + +P KG++L   + +W      +T N +ISS          P + V        KK  V PVE +VRG++ GS     W  Y K  ++
Sbjct:    9 LETDFPGLKLLNRGKVRDIYDLGDSLLIVATDRISAFDVIMPNPVPDKGRILTRITEFWLRFLSDVTENHLISSDVSRYPEQCRPYERVLAGRSMWVKKARVFPVECIVRGYLAGSG----WEDYRKTGQV 135          
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_STRGG (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=purC PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 49/108 (45.37%), Postives = 63/108 (58.33%), Query Frame = 1
Query:  346 VPGLKSKTRGKVRDIY--DGGDYLVLVTTDRQSAFDRILAS-IPFKGQVLNETSLWWFDQTRHITPNAVISSP---------DKNVTIAKKCSVIPVEFVVRGFVTGS 633
            VPGL     GKVRD+Y  + GD LV+V +DR SA+D +L + IP KG+VL   SLWWFDQ   + PN VIS+               I K   ++ VE V RG++TGS
Sbjct:   13 VPGLTHLHTGKVRDLYRNEAGD-LVMVASDRISAYDWVLPTEIPDKGRVLTRLSLWWFDQLADLVPNHVISTELPPGAPADWAGRTLICKSLRMVEVECVARGYLTGS 119          
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_STRM5 (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Stenotrophomonas maltophilia (strain R551-3) GN=purC PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.833e-13
Identity = 47/128 (36.72%), Postives = 68/128 (53.12%), Query Frame = 1
Query:  328 TNLHLTVPGLKSKTRGKVRDIYD-----------GGDYLVLVTTDRQSAFDRILAS-IPFKGQVLNETSLWWFDQTRHITPNAVIS------SPD--------KNVTIAKKCSVIPVEFVVRGFVTGS 633
            T L   +PGL  + RGKVRD++D            GDYL++V TDR SAFD +L   IP KG++L + S +WF +T H+ PN +         P+        K   + +K   +PVE + RG++ GS
Sbjct:    4 TLLQSDLPGLPLRHRGKVRDVFDIPRERLPAGTPPGDYLLMVATDRLSAFDVVLPDPIPGKGEMLCQVSNFWFAKTAHLMPNHLTGIDVASVLPEGVDPALYAKRAVVTRKLKPVPVEAIARGYLIGS 131          
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_DESAH (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=purC PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.833e-13
Identity = 46/116 (39.66%), Postives = 65/116 (56.03%), Query Frame = 1
Query:  334 LHLTVPGLKSKTRGKVRDIYDGGDYLVLVTTDRQSAFDRILAS-IPFKGQVLNETSLWWFDQTRHITPNAVISS-----PD----------KNVTIAKKCSVIPVEFVVRGFVTGS 633
            L    P +    +GKVRDIYD G+  ++VTTDR SAFD +L + IP KG+VL + S +WF Q   +  N +IS+     PD              + KK   +PVE +VRG+++GS
Sbjct:    6 LETQFPDMNLVRKGKVRDIYDTGEAFLMVTTDRLSAFDVVLPNGIPGKGKVLTKISEFWFKQMAPLVGNHLISTDVADFPDVCQPYAKVLSGRTMLVKKAEPLPVECIVRGYISGS 121          
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_DESAA (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=purC PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.833e-13
Identity = 47/127 (37.01%), Postives = 68/127 (53.54%), Query Frame = 1
Query:  346 VPGLKSKTRGKVRDIYDGGDYLVLVTTDRQSAFDRILAS-IPFKGQVLNETSLWWFDQTRHITPNAVISSP---------------DKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYIKASEI 678
            +P L    RGKVRD+YD GD  ++V TDR SAFD I+   IP KG+VL + SL+WFD  + I  N V+++                +    + KK     +E VVRG+++GS     W+ Y K+  +
Sbjct:   10 LPDLPEPKRGKVRDMYDLGDAYLMVATDRLSAFDVIMPDPIPDKGKVLTQISLFWFDVMKDIVDNHVLTAKVDEFPVKCRQYADILEGRSILVKKVQPQAIECVVRGYISGSG----WSSYKKSQSV 132          
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_THISH (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=purC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.127e-13
Identity = 48/119 (40.34%), Postives = 67/119 (56.30%), Query Frame = 1
Query:  370 RGKVRDIYD-GGDYLVLVTTDRQSAFDRILAS-IPFKGQVLNETSLWWFDQTRHITPNAVI------SSPDK--------NVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYIKASEI 678
            RGKVRD+Y  G D+L++VTTDR SAFD IL + IP KG+VL + S +WF +  HI PN +       + PD            + K+   +P+E VVRG++ GS     W  Y K  ++
Sbjct:   18 RGKVRDLYAVGDDHLLIVTTDRVSAFDVILPTPIPGKGEVLTKISEFWFRKLEHIVPNQLADMSLAEAVPDAAERAPLEGRSLVVKRLKALPIEAVVRGYLIGSG----WKDYQKTGQV 132          
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_EUBE2 (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=purC PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.335e-13
Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 1
Query:  373 GKVRDIYDGGDYLVLVTTDRQSAFDRILAS-IPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNV-------------TIAKKCSVIPVEFVVRGFVTGS 633
            GKVR++YD  D LV+V TDR SAFD IL + +  KG +L + S +WFD T+ +  N ++S    ++              + KK +++PVE +VRG++TGS
Sbjct:   14 GKVREVYDCDDKLVMVATDRISAFDHILKNKVTEKGAILTQMSKFWFDYTKDVVANHMVSVDVNDMPEFFHKDEYIGRSMLCKKLTMLPVECIVRGYITGS 114          
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_DECAR (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Dechloromonas aromatica (strain RCB) GN=purC PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13
Identity = 46/112 (41.07%), Postives = 61/112 (54.46%), Query Frame = 1
Query:  343 TVPGLKSKTRGKVRDIYD-GGDYLVLVTTDRQSAFDRILAS-IPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNV-------------TIAKKCSVIPVEFVVRGFVTGS 633
            T+  L    +GKVRDIY    D L++VTTDR SAFD IL   IP KG+VL   + +WFD+  HI PN +     + V              + K+   +P+E VVRG+V GS
Sbjct:    9 TITSLPLINKGKVRDIYAVDADKLLIVTTDRLSAFDVILPDPIPRKGEVLQAVANFWFDKLGHIVPNQLTGIDPETVVAENEREQVRGRAVVVKRLKPLPIEAVVRGYVIGS 120          
BLAST of FC931387 vs. ExPASy Swiss-Prot
Match: PUR7_PICAN (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Pichia angusta GN=ADE1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.099e-13
Identity = 48/143 (33.57%), Postives = 79/143 (55.24%), Query Frame = 1
Query:  319 LSETNLHLTVPGLKSKTRGKVRDIYDGGDYLVL-VTTDRQSAFDRILAS-IPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNV---------------------TIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYIKASEI 678
            +++TNL   +P +    RGKVRDIY   D ++L V TDR SA+D I+ + I  KG++L + S++WF+    + PN +++S DK++                      + KK  ++P+E +VRG++TGS     W  Y K+S +
Sbjct:    3 VTQTNLDGILPLV---ARGKVRDIYQVDDNMLLFVATDRISAYDVIMENGIKDKGKILTQLSVFWFNLLSDVIPNHLVASSDKDIFAKLPEQLSEPKYKAQLAGRSLLVKKHKLVPLEAIVRGYITGSA----WKEYKKSSTV 138          
The following BLAST results are available for this feature:
BLAST of FC931387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
PUR7_PELCD2.829e-1437.07Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_SYNFM3.694e-1439.69Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_STRGG3.694e-1445.37Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_STRM51.833e-1336.72Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_DESAH1.833e-1339.66Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_DESAA1.833e-1337.01Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_THISH3.127e-1340.34Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_EUBE25.335e-1339.60Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_DECAR6.967e-1341.07Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_PICAN9.099e-1333.57Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]

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Properties
Property NameValue
Genbank descriptionC34104E12EF PostHarvP1 Citrus clementina cDNA clone C34104E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931387 ID=FC931387; Name=FC931387; organism=Citrus clementina; type=EST; length=702bp
GAAAATTTCAAAGCAACAATGGCTGAGTGTATGCGTACAACCTTAAACCC
TCCAAAAACCCCACTTCACAGCAACAAAATCTCAGCTCCAAAACTCTCAT
TCTCATCTTCTTTCTCTTCATTTGGAACAAAACCCAATTCTTCTAATTCA
AACAATTATCCAAGAATCTCTCTATCTGTCATGTCCAACAAGAGCCAGAA
CCAGAACCAGAACCAAAACCACCACCACCACCAACAACACTTGTCTCTTG
ATGCTGTGATTAGCAGCAATCGCAAAGCAGAGCTTCTTGGTGACATCAAA
GGCTCGCTTTCGAACCGTCTCTCCGAGACAAATCTTCACTTGACTGTTCC
CGGTCTCAAATCCAAAACCAGGGGCAAGGTGAGAGATATTTATGATGGCG
GGGATTATCTTGTTCTGGTGACAACGGACCGCCAAAGTGCGTTCGATAGA
ATTCTTGCTTCTATTCCCTTCAAAGGCCAGGTTCTTAATGAAACGAGTTT
GTGGTGGTTTGATCAAACTAGGCACATAACTCCAAATGCAGTCATTTCAT
CTCCAGATAAAAATGTTACAATTGCGAAGAAGTGTTCTGTTATCCCTGTT
GAATTTGTAGTCAGAGGTTTTGTGACTGGAAGTACTGATACCTCTCTGTG
GACGGTTTACATAAAGGCATCCGAAATTATTGTGGCAATGCTCTTCAGAT
GG
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