FC931391

Overview
NameFC931391
Unique NameFC931391
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: S15A2_RAT (Solute carrier family 15 member 2 OS=Rattus norvegicus GN=Slc15a2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18
Identity = 60/218 (27.52%), Postives = 101/218 (46.33%), Query Frame = 2
Query:  104 SMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACP--GPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS------WAWGLGIPAFMMFLSCAMXFLGSRLY 733
            S+ F++ NE  E+    G  + L +Y     +    T+T++ + FS    F  +LGA ++D++ G++KT+ + S+   LG +  SL                 GA P  G           GL L+ +G GGI+PC  AFG DQF    E   +  T +F+ +Y       +IS  +   ++ DV       +A   G+P  +M L+  +  +GS++Y
Sbjct:   45 SIAFIVVNEFCERFSYYGMKAVLTLYFLYFLHWNEDTSTSVYHAFSSLCYFTPILGAAIADSWLGKFKTIIYLSLVYVLGHVFKSL-----------------GAIPILGGKMLHTILSLVGLSLIALGTGGIKPCVAAFGGDQFE---EEHAEARTRYFSVFYLAINAGSLISTFITPMLRGDVKCFGQDCYALAFGVPGLLMVLALVVFAMGSKMY 242          
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: S15A2_RABIT (Solute carrier family 15 member 2 OS=Oryctolagus cuniculus GN=SLC15A2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18
Identity = 58/216 (26.85%), Postives = 104/216 (48.15%), Query Frame = 2
Query:  104 SMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVS------WAWGLGIPAFMMFLSCAMXFLGSRLY 733
            S+ F++ NE  E+    G  + L +Y     +    T+T++ + FS    F  +LGA ++D++ G++KT+ + S+ + LG ++ SL+A       P  G +                  GL L+ +G GGI+PC  AFG DQF    E   +  T +F+ +Y       +IS  +   ++ DV       +A   G+P  +M ++  +  +GS++Y
Sbjct:   45 SIAFIVVNEFCERFSYYGMKAVLTLYFLYFLHWNEDTSTSVYHAFSSLCYFTPILGAAIADSWLGKFKTIIYLSLVNVLGHVIKSLSAF------PILGGK---------VVHTVLSLVGLCLIALGTGGIKPCVAAFGGDQFE---EKHAEERTRYFSGFYLAINAGSLISTFITPMLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSKMY 242          
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: S15A1_RAT (Solute carrier family 15 member 1 OS=Rattus norvegicus GN=Slc15a1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.546e-18
Identity = 58/218 (26.61%), Postives = 101/218 (46.33%), Query Frame = 2
Query:  104 SMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMIS--LTVIVYVQ------SDVSWAWGLGIPAFMMFLSCAMXFLGSRLY 733
            S+ F++ NE  E+    G  + L++Y           +T + + F        +LGA ++D++ G++KT+   S+   +G  V+S+++        D  + D    P   P  +A    GL L+ +G GGI+PC  AFG DQF    E  +     FF+ +Y       ++S  +T I+ VQ          +    G+PA +M ++  +  LGS +Y
Sbjct:   15 SIFFIVVNEFCERFSYYGMRALLVLYFRNFLGWDDDLSTAIYHTFVALCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVISVSSI------NDLTDHDHDGSPNNLPLHVALSMIGLALIALGTGGIKPCVSAFGGDQFEEGQEKQR---NRFFSIFYLAINAGSLLSTIITPILRVQQCGIHSQQACYPLAFGVPAALMAVALIVFVLGSGMY 223          
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: S15A1_MOUSE (Solute carrier family 15 member 1 OS=Mus musculus GN=Slc15a1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.546e-18
Identity = 58/218 (26.61%), Postives = 101/218 (46.33%), Query Frame = 2
Query:  104 SMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMIS--LTVIVYVQ------SDVSWAWGLGIPAFMMFLSCAMXFLGSRLY 733
            S+ F++ NE  E+    G  + L++Y           +T + + F        +LGA ++D++ G++KT+   S+   +G  V+S+++        D  + D    P   P  +A    GL L+ +G GGI+PC  AFG DQF    E  +     FF+ +Y       ++S  +T I+ VQ          +    G+PA +M ++  +  LGS +Y
Sbjct:   15 SIFFIVVNEFCERFSYYGMRALLVLYFRNFLGWDDNLSTAIYHTFVALCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVISVSSI------NDLTDHDHNGSPDSLPVHVALSMVGLALIALGTGGIKPCVSAFGGDQFEEGQEKQR---NRFFSIFYLAINGGSLLSTIITPILRVQQCGIHSQQACYPLAFGVPAALMAVALIVFVLGSGMY 223          
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: S15A3_HUMAN (Solute carrier family 15 member 3 OS=Homo sapiens GN=SLC15A3 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.755e-18
Identity = 62/215 (28.84%), Postives = 100/215 (46.51%), Query Frame = 2
Query:  128 ETFEKLGTTGTSSNLLVYL-TTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSG----ACPG-------PTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP------AFMMFLSCAMXFL 718
            E  E+    G ++NL++YL +T FN     AT    +F G +     +G +L+D Y GRY+ +   S+  +L    L    A        CG   +     ACP        P+P+    L+ GL L+ + A  +R    +FGADQ     + G+     FFNW+Y++     ++SL V+ ++Q ++S+  G  IP      AF +FL     F+
Sbjct:   42 EMLERAAFFGVTANLVLYLNSTNFNWTGEQATRAALVFLGASYLLAPVGGWLADVYLGRYRAVAL-SLLLYLAASGLLPATAFPDGRSSFCGEMPASPLGPACPSAGCPRSSPSPYCAPVLYAGLLLLGLAASSVRSNLTSFGADQV---MDLGRDATRRFFNWFYWSINLGAVLSLLVVAFIQQNISFLLGYSIPVGCVGLAFFIFLFATPVFI 252          
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: S15A1_RABIT (Solute carrier family 15 member 1 OS=Oryctolagus cuniculus GN=SLC15A1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.728e-17
Identity = 58/218 (26.61%), Postives = 100/218 (45.87%), Query Frame = 2
Query:  104 SMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMIS--LTVIVYVQ------SDVSWAWGLGIPAFMMFLSCAMXFLGSRLY 733
            S+ F++ NE  E+    G  + L++Y           +T + + F        +LGA ++D + G++KT+ + S+   +G  V SL++        +  + +    P   P  +A    GL L+ +G GGI+PC  AFG DQF    E  +     FF+ +Y       ++S  +T +V VQ          +    GIPA +M +S  +  +GS +Y
Sbjct:   15 SIFFIVVNEFCERFSYYGMRALLILYFRNFIGWDDNLSTVIYHTFVALCYLTPILGALIADAWLGKFKTIVWLSIVYTIGQAVTSLSSV------NELTDNNHDGTPDSLPVHVAVCMIGLLLIALGTGGIKPCVSAFGGDQFEEGQEKQR---NRFFSIFYLAINAGSLLSTIITPMVRVQQCGIHVKQACYPLAFGIPAILMAVSLIVFIIGSGMY 223          
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: S15A1_HUMAN (Solute carrier family 15 member 1 OS=Homo sapiens GN=SLC15A1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.849e-17
Identity = 56/218 (25.69%), Postives = 101/218 (46.33%), Query Frame = 2
Query:  104 SMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMIS--LTVIVYVQ------SDVSWAWGLGIPAFMMFLSCAMXFLGSRLY 733
            S+ F++ NE  E+    G  + L++Y T   +     +T + + F        +LGA ++D++ G++KT+   S+   +G  V S+++        D  + +    P   P  +     GL L+ +G GGI+PC  AFG DQF    E  +     FF+ +Y       ++S  +T ++ VQ          +    G+PA +M ++  +  LGS +Y
Sbjct:   15 SIFFIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVALCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVTSVSSI------NDLTDHNHDGTPDSLPVHVVLSLIGLALIALGTGGIKPCVSAFGGDQFEEGQEKQR---NRFFSIFYLAINAGSLLSTIITPMLRVQQCGIHSKQACYPLAFGVPAALMAVALIVFVLGSGMY 223          
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: PEPT2_CAEEL (Peptide transporter family 2 OS=Caenorhabditis elegans GN=pept-2 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.849e-17
Identity = 66/219 (30.14%), Postives = 101/219 (46.12%), Query Frame = 2
Query:   98 WKSMPF-VIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQS------DVSWAWGLGIPAFMMFLSCAMXFLGSRLY 733
            W    F ++GNE  E+    G  + L +Y   I N     +T L + F+     + LLG+ L+D Y G++ T+ F S+    G ++L    A S + P       SG+   P    L  L  GL     G GGI+PC  AFG DQF  +     + I+ FF+ +YF+     +IS+ +  Y +S      D  +    GIPA +M ++  +   GS  Y
Sbjct:   30 WPKQTFLIVGNELCERFSFYGMRAVLTLYFFNILNFSQSFSTVLFHAFTVICYSSPLLGSILADGYIGKFWTIFFISIFYACGQILL----AFSSIAP-------SGSSHHPLLDLLGLLIVGL-----GTGGIKPCVSAFGGDQFPAHY---TRMISLFFSMFYFSINAGSLISMWLTPYFRSMSCFGHDSCYPLAFGIPAILMIVATLVFMAGSFWY 229          
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: S15A4_BOVIN (Solute carrier family 15 member 4 OS=Bos taurus GN=SLC15A4 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.255e-16
Identity = 61/215 (28.37%), Postives = 100/215 (46.51%), Query Frame = 2
Query:  116 VIGNETFEKLGTTGTSSNLLVYLT-TIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLH-------PPDCGNQDSGACPG-PTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIP------AFMMFLSCAMXF 715
            V+  E  E+    G ++NL+++L  T F  +   A+  + +F G T   +  G +L+D   GR + +  +     LGML   L AA +          P +  N  +  C   PT +    + + L L+ +G G ++     FGADQ     + G +    FFNW+Y++     ++SL  I Y+Q +VS+  G  IP      AF++FL C   F
Sbjct:   29 VLLTELLERAAFYGVTANLVLFLNGTAFGWEGAEASQALLLFMGLTYLVSPFGGWLADARLGRARAILLSLALYLLGMLAFPLLAAPATRSALCGAPGPTNVRNCSAPPCTDTPTRYCAPAVLSALALVGLGVGAVKANITPFGADQVK---DRGPEATRRFFNWFYWSINLGAIVSLGGIAYIQQNVSFVTGYAIPAVCIGVAFVVFL-CGQTF 239          
BLAST of FC931391 vs. ExPASy Swiss-Prot
Match: S15A3_MOUSE (Solute carrier family 15 member 3 OS=Mus musculus GN=Slc15a3 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.255e-16
Identity = 58/215 (26.98%), Postives = 100/215 (46.51%), Query Frame = 2
Query:  128 ETFEKLGTTGTSSNLLVYLTTI-FNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQD---------SGACPGP--TPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGI------PAFMMFLSCAMXFL 718
            +  E+    G +SNL++YL ++ FN     A+    +F G +     +G +L+D Y GR+ T+   S+  +L    L LT   +      CG            S +C G   +P+    L+  L L+ + A  +R    +FGADQ     + G+     FFNW+Y++     ++SL V+ +++ ++S+ WG  I       AF +FL     F+
Sbjct:   42 QMLERAAFFGVTSNLVLYLNSLNFNWDGQQASRATLLFLGASYLLAPVGGWLADVYLGRFLTISL-SLLLYLAASGLLLTTITNDGRRSFCGEMPELPLEPACPSSSCQGSWSSPYCATTLYLVLLLLALAASSVRSTLTSFGADQV---MDLGRDATRRFFNWFYWSINLGAILSLLVVAFIEQNISFLWGYSIIVGLVGLAFFIFLFATPVFI 252          
The following BLAST results are available for this feature:
BLAST of FC931391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
S15A2_RAT1.563e-1827.52Solute carrier family 15 member 2 OS=Rattus norveg... [more]
S15A2_RABIT2.041e-1826.85Solute carrier family 15 member 2 OS=Oryctolagus c... [more]
S15A1_RAT4.546e-1826.61Solute carrier family 15 member 1 OS=Rattus norveg... [more]
S15A1_MOUSE4.546e-1826.61Solute carrier family 15 member 1 OS=Mus musculus ... [more]
S15A3_HUMAN7.755e-1828.84Solute carrier family 15 member 3 OS=Homo sapiens ... [more]
S15A1_RABIT1.728e-1726.61Solute carrier family 15 member 1 OS=Oryctolagus c... [more]
S15A1_HUMAN3.849e-1725.69Solute carrier family 15 member 1 OS=Homo sapiens ... [more]
PEPT2_CAEEL3.849e-1730.14Peptide transporter family 2 OS=Caenorhabditis ele... [more]
S15A4_BOVIN4.255e-1628.37Solute carrier family 15 member 4 OS=Bos taurus GN... [more]
S15A3_MOUSE4.255e-1626.98Solute carrier family 15 member 3 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionC34104F04EF PostHarvP1 Citrus clementina cDNA clone C34104F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931391 ID=FC931391; Name=FC931391; organism=Citrus clementina; type=EST; length=737bp
GGGGAACTTTGAGCACTCTTTTCCAGACACCATGGAGAAGAACAGTAAGA
CAGCAGTTGTTGCGACAGATGATGAGCCTCAGCTCAACTACAGGGGATGG
AAATCAATGCCTTTTGTTATAGGAAATGAAACTTTTGAAAAGCTGGGGAC
TACTGGCACTTCCTCCAACCTCTTGGTATATTTGACAACCATATTCAACA
TGAAAAGTATCACGGCAACAACTCTCATTAACATCTTCAGTGGTACCACA
AATTTTGCCACCTTGCTCGGAGCATTCCTGTCCGATACTTACTTTGGCCG
GTACAAGACTCTGGGATTCGCTTCTGTTGCCTCTTTTCTGGGGATGCTTG
TACTTTCTTTGACAGCAGCAATCTCAAAACTGCACCCACCTGATTGTGGA
AATCAAGATTCTGGAGCGTGCCCTGGGCCAACACCATGGCAACTGGCTTT
TCTGTTCACTGGGCTAGGACTGATGGTAATTGGAGCTGGCGGCATTAGGC
CATGTAACTTGGCCTTTGGTGCTGACCAATTTAATCCCAATACTGAATCT
GGGAAGCAGGGAATCACCAGCTTCTTCAATTGGTACTACTTCACCTTCAC
CTTCGCGATGATGATATCTTTGACAGTCATTGTTTACGTGCAATCGGATG
TGAGCTGGGCCTGGGGATTGGGAATCCCTGCATTTATGATGTTCTTATCC
TGTGCAATGNTCTTCCTGGGATCTAGACTCTATGCGA
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