FC931395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_SYNE7 (Spermidine synthase OS=Synechococcus elongatus (strain PCC 7942) GN=speE PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.467e-18 Identity = 57/211 (27.01%), Postives = 96/211 (45.50%), Query Frame = 1 Query: 208 PMWPGEAHSLKVK-----EILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES----MWLHTHLIEDMISICRE 708 P+W E +V+ +IL++ S +Q++ + ++ YG+ L+LD E+ E Y E + H PL + S V S++Y + + DPR+ + IGD + F++ P YD I+VD SDP GPA L + F++ + L+PGGV + AES + +H +IE + ++ E Sbjct: 6 PVWIDEVFEDRVRYGLRGQILWEETSPFQKITIVDTEHYGRGLLLDDCWMTAERCEVCYHEYLVHPPLTTAASIARVLVIGGGDGGTVREVLRYAEVEQVDLVEIDGRVVELSQEYLGAIGTAWADPRLNVKIGDGIAFVQTAPDASYDVILVDGSDPAGPAAGLFNREFYENCRRVLKPGGVFASQAESPDSFLAVHLEMIETLSAVFAE 216
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_THET8 (Spermidine synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=speE PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.503e-18 Identity = 65/200 (32.50%), Postives = 94/200 (47.00%), Query Frame = 1 Query: 193 MYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPK-----------------------------------TVSKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVG---PAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTH 675 MYF + P E +++ ++ GK+ +Q+ +FES +GKVL+LD VQ TE+DE Y E + H + + P PK V+K++ PE G F+DPR L I DA +L + YD +I+D +DPVG PA+ L F+ + L PGGV+ M M L TH Sbjct: 5 MYFFEHVTPYETLVRRMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEE-RYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVM-GMQAGMILLTH 202
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_THET2 (Spermidine synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=speE PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.503e-18 Identity = 65/200 (32.50%), Postives = 94/200 (47.00%), Query Frame = 1 Query: 193 MYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPK-----------------------------------TVSKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVG---PAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTH 675 MYF + P E +++ ++ GK+ +Q+ +FES +GKVL+LD VQ TE+DE Y E + H + + P PK V+K++ PE G F+DPR L I DA +L + YD +I+D +DPVG PA+ L F+ + L PGGV+ M M L TH Sbjct: 5 MYFFEHVTPYETLVRRMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEE-RYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVM-GMQAGMILLTH 202
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_HAMD5 (Spermidine synthase OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=speE PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.269e-18 Identity = 52/183 (28.42%), Postives = 90/183 (49.18%), Query Frame = 1 Query: 211 MWPGEAHS-----LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 +W + HS +KE+L++ K+++Q++++F++ +G+V+ L+ +VQ TE+DE Y EM+ H+PL + K V ++YFP G ++DPR +L I D F+ Q +D II DS+DP+GP + L + F+ + L GG+ Sbjct: 6 LWYEKLHSSFGQYFSIKEVLYRDKTDHQDLIIFDTEEFGRVMALNHVVQTTERDEFIYHEMMTHVPLLAHGDAKKVLIIGGGDGGILREVCRHAGVKEIIMVEIDQDVVNLCQEYFPHHHAGAYDDPRFQLKIDDGAHFVEQT-NHRFDLIISDSTDPIGPGEHLFKSSFYQACRRILNAGGL 187
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_SODGM (Spermidine synthase OS=Sodalis glossinidius (strain morsitans) GN=speE PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.269e-18 Identity = 54/168 (32.14%), Postives = 82/168 (48.81%), Query Frame = 1 Query: 241 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPK-----------------------------------TVSKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 V +L++ + Q++++FE+ A G+V+ LDG+VQ TE+DE Y EM+AH+PL + K T K+Y P G F+DPR +L I D V F+ Q ++D II D +DP+GP + L F+ A+ L GG+ Sbjct: 21 VDNLLYRDTTGQQDLVIFENAALGRVMALDGVVQTTERDEFIYHEMMAHVPLIAHGGAKKVLIIGGGDGGMLREVSRHPGVEQITMVEIDAGVVTFCKQYLPRHNAGAFDDPRFKLVIADGVNFVSQSSE-KFDVIISDCTDPIGPGESLFTSNFYQDCARCLNEGGI 187
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_ERWT9 (Spermidine synthase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=speE PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.269e-18 Identity = 54/185 (29.19%), Postives = 89/185 (48.11%), Query Frame = 1 Query: 205 NPMWPGEAHS-----LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPK-----------------------------------TVSKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 N MW H+ V +I+++ K+++Q++++FE+ A G+V+ LDG+VQ TE+DE Y EM+ H+PL + +PK T ++Y P G ++D R +L I D V F+ Q ++D II D +DP+GP + L F+ + L G+ Sbjct: 4 NEMWYETLHTGFGQYFSVDKIIYREKTDHQDLVIFENAALGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGAPKRVLIIGGGDGAMLREVCRHKNIEQITMVEIDAGVVTFCRQYLPNHNAGAYDDARFKLVIDDGVNFVNQT-SDKFDVIISDCTDPIGPGESLFTSEFYQGCRRCLNQDGI 187
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_THENN (Spermidine synthase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=speE PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.242e-17 Identity = 52/170 (30.59%), Postives = 83/170 (48.82%), Query Frame = 1 Query: 235 LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDP-VGPAQELVEKPFFDTIAKALRPGGV 636 +K+ +++ G+S+ Q + +FE+ G V LDGI TEKDE Y EM+AH+P+ P+PK V ++KY + + GF+DPR + I + E++R+ + E+D II+DS+DP G L + F+ AL+ GV Sbjct: 32 MKMNRVIYSGQSDIQRIDIFENPDLGVVFALDGITMTTEKDEFMYHEMLAHVPMFLHPNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF-KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGV 200
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_THEMA (Spermidine synthase OS=Thermotoga maritima GN=speE PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.242e-17 Identity = 52/170 (30.59%), Postives = 83/170 (48.82%), Query Frame = 1 Query: 235 LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDP-VGPAQELVEKPFFDTIAKALRPGGV 636 +K+ +++ G+S+ Q + +FE+ G V LDGI TEKDE Y EM+AH+P+ P+PK V ++KY + + GF+DPR + I + E++R+ + E+D II+DS+DP G L + F+ AL+ GV Sbjct: 32 MKMNRVIYSGQSDIQRIDIFENPDLGVVFALDGITMTTEKDEFMYHEMLAHVPMFLHPNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF-KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGV 200
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_THEP1 (Spermidine synthase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=speE PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.119e-17 Identity = 52/170 (30.59%), Postives = 83/170 (48.82%), Query Frame = 1 Query: 235 LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDP-VGPAQELVEKPFFDTIAKALRPGGV 636 +K+ +++ G+S+ Q + +FE+ G V LDGI TEKDE Y EM+AH+P+ P+PK V ++KY + + GF+DPR + I + E++R+ + E+D II+DS+DP G L + F+ AL+ GV Sbjct: 32 MKINRMIYSGQSDIQRIDIFENPDLGVVFSLDGITMTTEKDEFMYHEMLAHVPMFLHPNPKKVLIIGGGDGGTLREVLKHDSVEKAVLCEVDGLVIEAARKYLKQTSCGFDDPRTEIVIANGAEYVRKF-KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGV 200
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_SYNS3 (Spermidine synthase OS=Synechococcus sp. (strain CC9311) GN=speE PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.767e-17 Identity = 55/189 (29.10%), Postives = 82/189 (43.39%), Query Frame = 1 Query: 250 ILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 708 +L + S +Q + V +S YGK L+LDG E E Y E + H LCS + + V S+++ P + G + DPR L IGD + + + YD ++VD SDP GPA+ L + FF + L+PGGV +ES + DM+ + RE Sbjct: 27 VLVEETSPFQRITVIDSQRYGKGLLLDGCWMTAEHQERHYHEALVHPALCSAKAIERVLVIGGGDGGTARECLRYPGVKHLDMVEIDGRVVDLSQEHLPSIGGGCWHDPRFHLTIGDGIAWAAEAENAFYDVVLVDGSDPTGPAEGLFNRAFFSNCCRILKPGGVFATQSESPEAFRQVHIDMVKLIRE 215 The following BLAST results are available for this feature:
BLAST of FC931395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931395 ID=FC931395; Name=FC931395; organism=Citrus clementina; type=EST; length=712bpback to top |