FC931395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_MOUSE (Spermidine synthase OS=Mus musculus GN=Srm PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.038e-40 Identity = 87/227 (38.33%), Postives = 127/227 (55.95%), Query Frame = 1 Query: 130 STVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPK-----------------------------------TVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICR 705 + + GWF E+ S +WPG+A SL+V+++L +S YQ++LVF S YG VLVLDG++Q TE+DE +YQEMIA+LPLCS P+P+ VSKK+ P +AVGF ++ LH+GD EF++Q + +D II DSSDP+GPA+ L ++ ++ + AL+ G+LC E WLH LI++M C+ Sbjct: 14 AAIREGWFRETCS--------------LWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIEVSKKFLPGMAVGFSSSKLTLHVGDGFEFMKQ-NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGILCCQGECQWLHLDLIKEMRHFCK 225
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_HUMAN (Spermidine synthase OS=Homo sapiens GN=SRM PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.768e-40 Identity = 86/227 (37.89%), Postives = 127/227 (55.95%), Query Frame = 1 Query: 130 STVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPK-----------------------------------TVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICR 705 + + GWF E+ S +WPG+A SL+V+++L +S YQ++LVF S YG VLVLDG++Q TE+DE +YQEMIA+LPLCS P+P+ VSKK+ P +A+G+ ++ LH+GD EF++Q + +D II DSSDP+GPA+ L ++ ++ + AL+ GVLC E WLH LI++M C+ Sbjct: 14 AAIREGWFRETCS--------------LWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ-NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQ 225
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_LEPBP (Spermidine synthase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=speE PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.151e-29 Identity = 69/192 (35.94%), Postives = 105/192 (54.69%), Query Frame = 1 Query: 220 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 G A S +V + + +S +Q++ +FE+ ++G++ LDG+ +T KDE +Y EMIAH+P+ S P+P++V S KYFPE A +DP+V H D +F R +G +D I+VDSSDPVGPA+ L ++PFF +A AL+P G++ AES W H +I + Sbjct: 14 GRAVSYRVTKTIESLQSPFQKIDIFETQSFGRMFTLDGVTMVTNKDEHSYHEMIAHIPMMSHPNPESVLVIGGGDGGTVREVLKHPSVKEVVLCEIDKAVVDISYKYFPECADAMKDPKVIHHYDDGAKFARD-NKGRFDVILVDSSDPVGPAEVLFKEPFFRDMASALKPTGIIATQAESFWYHGDVITSL 204
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_LEPBA (Spermidine synthase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=speE PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.151e-29 Identity = 69/192 (35.94%), Postives = 105/192 (54.69%), Query Frame = 1 Query: 220 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 G A S +V + + +S +Q++ +FE+ ++G++ LDG+ +T KDE +Y EMIAH+P+ S P+P++V S KYFPE A +DP+V H D +F R +G +D I+VDSSDPVGPA+ L ++PFF +A AL+P G++ AES W H +I + Sbjct: 14 GRAVSYRVTKTIESLQSPFQKIDIFETQSFGRMFTLDGVTMVTNKDEHSYHEMIAHIPMMSHPNPESVLVIGGGDGGTVREVLKHPSVKEVVLCEIDKAVVDISYKYFPECADAMKDPKVIHHYDDGAKFARD-NKGRFDVILVDSSDPVGPAEVLFKEPFFRDMASALKPTGIIATQAESFWYHGDVITSL 204
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE2_LEPIN (Spermidine synthase 2 OS=Leptospira interrogans GN=speE2 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.043e-28 Identity = 67/198 (33.84%), Postives = 106/198 (53.54%), Query Frame = 1 Query: 220 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 708 G A +KVKE L + +Q++ VFES+ +G++ LDG+V +TE DE AY EMI H+P+ S P+P+ V +YFPE+A +DPRV+ D ++++ + +D I+VDSSDPVGPA+ L ++PF++T+A L+ GG+ ES + H +I ++ + E Sbjct: 15 GRALKIKVKEFLHSRTTPFQKIDVFESVGFGRMFTLDGVVMMTEADEFAYHEMIVHVPMMSHPNPEKVLVIGGGDGGTVREVLKHPSVKEVHLCEIDKGVIDVCYEYFPEIANAMKDPRVKHAYEDGAKYVKDY-QNYFDCIMVDSSDPVGPAEVLFKRPFYETMANCLKEGGICTTQGESFYYHGSIIRELFNFIPE 211
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPSY_YEAST (Spermine synthase OS=Saccharomyces cerevisiae GN=SPE4 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.550e-28 Identity = 75/229 (32.75%), Postives = 116/229 (50.66%), Query Frame = 1 Query: 127 HSTVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGE----YDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGG-VLCNMAESMWLHTHLIEDM 690 H + GWF E N+ +PG+A ++ V IL++ +SE+Q++L+F + YG VLVLDGIVQ TE DE AYQEMI H+ + + +PK V S+K+ P L+ G F+D R+ L + D +FL+ + + +D II DSSDP GPA+ ++ +F+ + AL P G V+ +E+ WL+ + D+ Sbjct: 7 HPYIKDGWFRE-------------INDKSFPGQAFTMTVDSILYEARSEFQDILIFRNKVYGTVLVLDGIVQCTEFDEFAYQEMITHIAMFAHSNPKRVLIIGGGDGGVLREVAKHSCVEDITMVEIDSSVIELSRKFLPTLSNGAFDDERLDLKLCDGFKFLQDIGASDVHKKFDVIITDSSDPEGPAEAFFQERYFELLKDALNPNGVVIMQSSENFWLNLKYLHDL 222
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE1_THETN (Spermidine synthase 1 OS=Thermoanaerobacter tengcongensis GN=speE1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.571e-27 Identity = 67/194 (34.54%), Postives = 103/194 (53.09%), Query Frame = 1 Query: 232 SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 708 S+KVKE L K+ YQ + + +S +G+VLVLDGI+Q TEKDE Y EMI H+PL + +PK V SKKY P ++ +DPRV + IGD ++++ + + E+D +IVDS+DP+GPA L F+ + + LR G++ ES +++ LI + + +E Sbjct: 16 SIKVKETLVVEKTPYQHLAILDSYQFGRVLVLDGILQTTEKDEFVYHEMIVHVPLFTHKNPKDVLIIGGGDGGSVREVLKHSSVERVVLAEIDEAVIRNSKKYLPTISSALDDPRVEIMIGDGIKYVNE-HKNEFDVVIVDSTDPIGPAVGLFTSDFYRAVYECLREDGIIVAQTESPFIYGKLINKISKMFKE 208
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_THEPX (Spermidine synthase OS=Thermoanaerobacter sp. (strain X514) GN=speE PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.912e-26 Identity = 65/194 (33.51%), Postives = 103/194 (53.09%), Query Frame = 1 Query: 232 SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 708 SLKVKE L K+ YQ + + ++ +G+VL LDGI+Q TEKDE Y EMI H+PL + +PK+V SKKY P ++ +DPRV + IGD ++++ + + E+D +IVDS+DP+GPA L F+ + + L+ G++ ES +++ LI + + +E Sbjct: 16 SLKVKETLVVEKTPYQHLAILDTYQFGRVLTLDGILQTTEKDEFVYHEMIVHVPLFTHKNPKSVLIVGGGDGGSVREVLKHPSVERVVLAEIDEAVVRNSKKYLPTISQALDDPRVEIMIGDGIKYVNE-HKNEFDVVIVDSTDPIGPAVGLFTSDFYKAVYECLKEDGIIVAQTESPFIYGKLINKLSKMFKE 208
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_THEP3 (Spermidine synthase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=speE PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.912e-26 Identity = 65/194 (33.51%), Postives = 103/194 (53.09%), Query Frame = 1 Query: 232 SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 708 SLKVKE L K+ YQ + + ++ +G+VL LDGI+Q TEKDE Y EMI H+PL + +PK+V SKKY P ++ +DPRV + IGD ++++ + + E+D +IVDS+DP+GPA L F+ + + L+ G++ ES +++ LI + + +E Sbjct: 16 SLKVKETLVVEKTPYQHLAILDTYQFGRVLTLDGILQTTEKDEFVYHEMIVHVPLFTHKNPKSVLIVGGGDGGSVREVLKHPSVERVVLAEIDEAVVRNSKKYLPTISQALDDPRVEIMIGDGIKYVNE-HKNEFDVVIVDSTDPIGPAVGLFTSDFYKAVYECLKEDGIIVAQTESPFIYGKLINKLSKMFKE 208
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE1_AQUAE (Spermidine synthase 1 OS=Aquifex aeolicus GN=speE1 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.259e-26 Identity = 68/189 (35.98%), Postives = 100/189 (52.91%), Query Frame = 1 Query: 229 HSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKT-----------------------------------VSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 H V +IL++GKS YQE+ V ES +G++L+LDG+VQL EK E Y E +AH+PL + P+P+ VSKKY P L+VGF+DPR + D ++++ E+D IIVDS+DPVG A L + FF + KAL+ G+ ES+ H ++ ++ Sbjct: 17 HCYTVSKILYQGKSPYQEIQVIESPEFGRMLILDGVVQLDEKYEFLYHEYLAHVPLHAHPNPRNVLIIGGGDGGTLREVLKHDIVERAVLVDIDKEVIEVSKKYLPTLSVGFQDPRAIVVNEDGYKYVQDY-ENEFDVIIVDSTDPVGFAHVLTTEDFFRHVYKALKEDGIFVAQTESIHYHLEMVSNI 204 The following BLAST results are available for this feature:
BLAST of FC931395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931395 ID=FC931395; Name=FC931395; organism=Citrus clementina; type=EST; length=712bpback to top |