FC931395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_ALKMQ (Spermidine synthase OS=Alkaliphilus metalliredigens (strain QYMF) GN=speE PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.584e-23 Identity = 63/177 (35.59%), Postives = 92/177 (51.98%), Query Frame = 1 Query: 232 SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 657 S KVKE LF +SE+Q+V V ++ +GK++ LDG+V +TEKDE Y +MI H+P+ P+ K V ++ YFP ++ E+PRV L+ D V F++ +YD II+DS+DPVGP + L + F+ KAL G+L N ES Sbjct: 16 SFKVKEHLFSEQSEFQKVDVLDTYEFGKLMTLDGLVMVTEKDEFIYHDMIVHVPMAVNPNIKNVLIIGGGDGGTARELMRYQSIKHVDMVEIDKMVCDVARDYFPTISSELENPRVSLYYEDGVAFIKD-KENKYDLIIIDSTDPVGPGEGLFSQEFYTNCFKALTEQGILVNQNES 191
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_CALS8 (Spermidine synthase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=speE PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.407e-23 Identity = 62/201 (30.85%), Postives = 100/201 (49.75%), Query Frame = 1 Query: 193 MYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 ++F P + K+ + ++ K++YQ++ + E+ +GK+LVLDG VQ T DE Y E+IAH+PL + P+PK V SKKY PE++ +D R + I D ++F+ + + +D IIVDS+DPVGPA L E F+ + + L+ G+ ES + LI ++ Sbjct: 6 LWFTEQQTPDLGFTCKITKTIYTAKTKYQDLAILETKQFGKMLVLDGAVQTTIVDEFCYHELIAHVPLFTHPNPKKVAVIGGGDGGVIREILKHEEVEKAYLIEIDQEVIEASKKYLPEISCALDDKRAEVIITDGIKFVSE-NKNMFDVIIVDSTDPVGPAVGLFESNFYQAVYECLKEDGLFVAQTESPFYDQDLIRNV 205
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_HYDS0 (Spermidine synthase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=speE PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.756e-23 Identity = 61/186 (32.80%), Postives = 97/186 (52.15%), Query Frame = 1 Query: 229 HSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKT-----------------------------------VSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLI 681 H + +IL++GKS+YQE+ V ES +GK+L+LDG+VQ TEK+E Y EM+ H + + +P+ VSKK+FP +A +DPR + D ++++ + E+D IIVDS+DPVG A L + FF + +AL+ G+ +ES+ H ++ Sbjct: 17 HCYGISKILYEGKSKYQEIQVVESHYFGKILILDGVVQFTEKNEFFYHEMLTHPVMFAHKNPQNVLIIGGGDGGILREVLKHKSVKKAVLVDIDKDVVEVSKKFFPTVACSMDDPRAIILNEDGFKYIQDY-KNEFDVIIVDSTDPVGFAHVLTTEEFFKYVFEALKEDGIYVGQSESLHYHLDIV 201
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_CLOTH (Spermidine synthase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=speE PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.756e-23 Identity = 61/202 (30.20%), Postives = 103/202 (50.99%), Query Frame = 1 Query: 193 MYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKT-----------------------------------VSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMI 693 ++F P + K K+ L K+EYQE+ V E+ +G++L+LDGI+Q T DE Y EMIAH+PL + +PK VSK+Y PE++ ++ +V + +GD ++++++ + E+D II+DS+DP+GPA+ L F+ + L+ G+ ES ++ LI +I Sbjct: 3 LWFTEYQTPTLGITCKTKKTLHSEKTEYQELAVIETEQFGRMLLLDGIIQTTVADEFVYHEMIAHVPLFTHKNPKKALVVGGGDGGSIREIVKHPSIEKAVLCEIDRRVIEVSKEYLPEISCALDNEKVEVVVGDGIKYVKE-HKNEFDVIIIDSTDPIGPAEGLFAIDFYRAVYDCLKEDGIFVAQTESPFIDKELITRII 203
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_DESAP (Spermidine synthase OS=Desulforudis audaxviator (strain MP104C) GN=speE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.282e-22 Identity = 64/198 (32.32%), Postives = 99/198 (50.00%), Query Frame = 1 Query: 193 MYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLI 681 ++F A S +V E L + +Q + V +++ +G+ LVLDGIVQ + DE Y EMI H+PL + P P+ V SKKY PELA GF+ P+ + IGD ++++ + + +D +IVDS+DP+GPA L F+ +I +AL+ G+ ES + +T LI Sbjct: 3 LWFTEKQNDNFAISYRVNETLHTETTPFQHLAVLDTVPFGRTLVLDGIVQTSVVDEYVYHEMITHVPLNTHPDPRRVLIVGGGDGGTLREVTKHPSVEKATLVEIDERVIAASKKYLPELACGFDSPKAEVVIGDGIKYVAEHKK-TFDLVIVDSTDPIGPAVGLFSLEFYRSIYEALKDEGLFVAQTESPYFNTDLI 199
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_CLOK5 (Spermidine synthase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=speE PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.187e-22 Identity = 62/196 (31.63%), Postives = 98/196 (50.00%), Query Frame = 1 Query: 226 AHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 708 A + K+KE L K++YQE+ + ++ A G++LVLDGIVQ T KDE Y EMI H+PL + P+P+ V KKY PE++ ++P+ + IGD ++++ Q R E+D IIVDS+DP G A+ L F+ I L G+ E+ + +++ + +E Sbjct: 14 AMTYKIKETLVTKKTKYQELAIVDTYALGRMLVLDGIVQTTVKDEYVYHEMITHIPLFTHPNPQKVLIVGGGDGGTVREVLKHETVEKVVLCEIDEQVVYECKKYLPEISCELDNPKCEVFIGDGIKYVHQ-HRNEFDVIIVDSTDPFGAAEGLFGGSFYKEIYNCLTEDGIFIAQTETPFYLPEVVKQVYKDAKE 208
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_CLOK1 (Spermidine synthase OS=Clostridium kluyveri (strain NBRC 12016) GN=speE PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.187e-22 Identity = 62/196 (31.63%), Postives = 98/196 (50.00%), Query Frame = 1 Query: 226 AHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 708 A + K+KE L K++YQE+ + ++ A G++LVLDGIVQ T KDE Y EMI H+PL + P+P+ V KKY PE++ ++P+ + IGD ++++ Q R E+D IIVDS+DP G A+ L F+ I L G+ E+ + +++ + +E Sbjct: 14 AMTYKIKETLVTKKTKYQELAIVDTYALGRMLVLDGIVQTTVKDEYVYHEMITHIPLFTHPNPQKVLIVGGGDGGTVREVLKHETVEKVVLCEIDEQVVYECKKYLPEISCELDNPKCEVFIGDGIKYVHQ-HRNEFDVIIVDSTDPFGAAEGLFGGSFYKEIYNCLTEDGIFIAQTETPFYLPEVVKQVYKDAKE 208
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_ANATD (Spermidine synthase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=speE PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.857e-22 Identity = 59/201 (29.35%), Postives = 101/201 (50.25%), Query Frame = 1 Query: 193 MYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 ++F P + K+ + ++ K++YQ++ + E+ +G++LVLDG VQ T DE Y E+I+H+PL + P+PK V SKKY PE++ +D R + I D ++F+ + + +D IIVDS+DPVGPA L + F+ + + L+ G+ ES + LI+++ Sbjct: 6 LWFTEQQTPDLGFTCKITKTIYTAKTQYQDLAILETKQFGRMLVLDGAVQTTIADEFCYHELISHVPLFTHPNPKKVAVIGGGDGGVIREILKHDEVEKAYLIEIDREVIEASKKYLPEISCALDDERAEVIITDGIKFVSE-NKNMFDVIIVDSTDPVGPAVGLFQDSFYKAVFECLKEDGLFVAQTESPFYDQDLIKNV 205
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_XANC5 (Spermidine synthase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=speE PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.364e-22 Identity = 63/205 (30.73%), Postives = 97/205 (47.32%), Query Frame = 1 Query: 181 TGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 T Y + G A ++ L + +S +Q++ ++++ +GK++++DG V LT +D Y EMI+H L + P+PK V S+KYFPEL D R L D V ++ P G D +IVDS+DPVGPA+ L K F+++ KAL+ G+L +ES LI +M Sbjct: 3 TNDNWYIEHFQPTGSAIGFRISGKLDEVQSPFQKIEIYQTTDWGKLMLIDGAVMLTSRDNFFYHEMISHPALFTHPAPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPELCDANHDARAELLFDDGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNKAFYESCFKALKDEGILVQQSESPLALLDLINEM 207
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_HALHL (Spermidine synthase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=speE PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.312e-22 Identity = 65/210 (30.95%), Postives = 96/210 (45.71%), Query Frame = 1 Query: 145 GWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVS-----------------------------------KKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLH 669 GWF+E+ G A SL + E + + +SEYQ + V+ + +G++LVLDG V LTE+DE Y EM+AH L + P+ V+ + +FP+L +D R L D + ++R+ D +IVDS+DPVGPA L K F + AL PGG++ +ES LH Sbjct: 4 GWFTEAVEDE---------------GVAFSLAIDERVHEEQSEYQHIEVYRTRRWGRLLVLDGCVMLTERDEFLYHEMMAHPALFAHREPRRVAIVGGGDCGILREVLRHPGVEHTLQVELDERVTRVAETHFPDLCTANDDERAELRFTDGLRWIREAEPESLDVVIVDSTDPVGPAAGLFTKEFLTDVRSALGPGGIVVQQSESPLLH 198 The following BLAST results are available for this feature:
BLAST of FC931395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931395 ID=FC931395; Name=FC931395; organism=Citrus clementina; type=EST; length=712bpback to top |