FC931395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_BACCN (Spermidine synthase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=speE PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.312e-22 Identity = 59/192 (30.73%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 238 KVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 708 ++ L ++E+Q++ + E+ +G +L+LDG+V TEKDE Y EM+AH+PL + P+P+ V SKKY P +A + RV + +GD + + EYD I+VDS++PVGPA L K F+ I+KAL+ G+ ++ W LI +++ +E Sbjct: 18 RINRTLHTEQTEFQKLDMVETEEFGNMLILDGMVMTTEKDEFVYHEMVAHVPLFTHPNPENVLVVGGGDGGVIREVLKHPSVKKATLVEIDGKVIEYSKKYLPSIAGALDHERVEVKVGDGFLHIAE-SENEYDVIMVDSTEPVGPAVNLFTKGFYAGISKALKEDGIFVAQTDNPWFTPELITNVVKDVKE 208
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_XANOR (Spermidine synthase OS=Xanthomonas oryzae pv. oryzae GN=speE PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21 Identity = 63/205 (30.73%), Postives = 98/205 (47.80%), Query Frame = 1 Query: 181 TGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 T Y + G A ++ L + +S +Q++ ++++ +GK++++DG V LT +D Y EMI+H L + P+PK V S+KYFPEL D R L D V ++ P G D +IVDS+DPVGPA+ L K F+++ KAL+ G+L +ES LI++M Sbjct: 3 TNDNWYIEHFQPTGSAIGFRISGKLDEVQSLFQKIEIYQTTDWGKLMLIDGAVMLTSRDNFFYHEMISHPALFTHPTPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPELCDSNHDARAELLFDDGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNKAFYESCFKALKDDGLLVQQSESPLALLDLIKEM 207
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_XANOP (Spermidine synthase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=speE PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21 Identity = 63/205 (30.73%), Postives = 98/205 (47.80%), Query Frame = 1 Query: 181 TGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 T Y + G A ++ L + +S +Q++ ++++ +GK++++DG V LT +D Y EMI+H L + P+PK V S+KYFPEL D R L D V ++ P G D +IVDS+DPVGPA+ L K F+++ KAL+ G+L +ES LI++M Sbjct: 3 TNDNWYIEHFQPTGSAIGFRISGKLDEVQSLFQKIEIYQTTDWGKLMLIDGAVMLTSRDNFFYHEMISHPALFTHPTPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPELCDSNHDARAELLFDDGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNKAFYESCFKALKDDGLLVQQSESPLALLDLIKEM 207
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_XANOM (Spermidine synthase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=speE PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21 Identity = 63/205 (30.73%), Postives = 98/205 (47.80%), Query Frame = 1 Query: 181 TGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 T Y + G A ++ L + +S +Q++ ++++ +GK++++DG V LT +D Y EMI+H L + P+PK V S+KYFPEL D R L D V ++ P G D +IVDS+DPVGPA+ L K F+++ KAL+ G+L +ES LI++M Sbjct: 3 TNDNWYIEHFQPTGSAIGFRISGKLDEVQSLFQKIEIYQTTDWGKLMLIDGAVMLTSRDNFFYHEMISHPALFTHPTPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPELCDSNHDARAELLFDDGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNKAFYESCFKALKDDGLLVQQSESPLALLDLIKEM 207
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_XANCP (Spermidine synthase OS=Xanthomonas campestris pv. campestris GN=speE PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.418e-21 Identity = 62/205 (30.24%), Postives = 98/205 (47.80%), Query Frame = 1 Query: 181 TGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 T Y + G A ++ L + +S +Q++ ++++ +GK++++DG V LT +D Y EMI+H L + +PK V S+KYFPEL +D R L D V ++ P G D +IVDS+DPVGPA+ L K F+++ KAL+ G+L +ES LI++M Sbjct: 3 TNDNWYIEHFQPTGSAIGYRISGKLDEVQSPFQKIEIYQTTDWGKLMIIDGAVMLTSRDNFFYHEMISHPALFTHAAPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPELCDSNDDARAELLFDDGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNKSFYESCFKALKDDGILVQQSESPLALLDLIKEM 207
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_XANCB (Spermidine synthase OS=Xanthomonas campestris pv. campestris (strain B100) GN=speE PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.418e-21 Identity = 62/205 (30.24%), Postives = 98/205 (47.80%), Query Frame = 1 Query: 181 TGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 T Y + G A ++ L + +S +Q++ ++++ +GK++++DG V LT +D Y EMI+H L + +PK V S+KYFPEL +D R L D V ++ P G D +IVDS+DPVGPA+ L K F+++ KAL+ G+L +ES LI++M Sbjct: 3 TNDNWYIEHFQPTGSAIGYRISGKLDEVQSPFQKIEIYQTTDWGKLMIIDGAVMLTSRDNFFYHEMISHPALFTHAAPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPELCDSNDDARAELLFDDGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNKSFYESCFKALKDDGILVQQSESPLALLDLIKEM 207
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_XANC8 (Spermidine synthase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=speE PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.418e-21 Identity = 62/205 (30.24%), Postives = 98/205 (47.80%), Query Frame = 1 Query: 181 TGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 T Y + G A ++ L + +S +Q++ ++++ +GK++++DG V LT +D Y EMI+H L + +PK V S+KYFPEL +D R L D V ++ P G D +IVDS+DPVGPA+ L K F+++ KAL+ G+L +ES LI++M Sbjct: 3 TNDNWYIEHFQPTGSAIGYRISGKLDEVQSPFQKIEIYQTTDWGKLMIIDGAVMLTSRDNFFYHEMISHPALFTHAAPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPELCDSNDDARAELLFDDGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNKSFYESCFKALKDDGILVQQSESPLALLDLIKEM 207
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_BACWK (Spermidine synthase OS=Bacillus weihenstephanensis (strain KBAB4) GN=speE PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.418e-21 Identity = 59/192 (30.73%), Postives = 95/192 (49.48%), Query Frame = 1 Query: 238 KVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 708 ++ L ++E+Q++ + E+ +G +L+LDG+V TEKDE Y EM+AH+PL + P+P+ V SK+Y P +A +D RV + +GD + + EYD I+VDS++PVGPA L K F+ I+KAL+ G+ ++ W LI + +E Sbjct: 18 RINRTLHTEQTEFQKLDMVETEEFGNMLILDGMVMTTEKDEFVYHEMVAHVPLFTHPNPENVLVVGGGDGGVIREVLKHPSVKKATLVEIDGKVIEYSKQYLPSIAGALDDERVEVKVGDGFLHIAE-SENEYDVIMVDSTEPVGPAVNLFTKGFYAGISKALKEDGIFVAQTDNPWFTPELITTVFKDVKE 208
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_NITOC (Spermidine synthase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=speE PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.852e-21 Identity = 56/192 (29.17%), Postives = 93/192 (48.44%), Query Frame = 1 Query: 220 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 G A SL ++E L + YQ + ++++ +G+++V+DG + L+ +D Y EM+AH L + P P+ V ++KYFPEL +DPR H GD + F+ + P D II+DS+DP+G A+ L + F+ + L G+L + +ES +H L+ M Sbjct: 17 GLAFSLAIREKLHAETTPYQYIEIYQTETFGRLMVIDGFIMLSGRDNFFYHEMMAHPVLFTHPHPQRVLIIGGGDCGTLREVLKHDVVEKVQQVEIDERVTRLAEKYFPELCQSNDDPRAHFHFGDGLRFVAEAPANSVDVIIIDSTDPIGSAEGLFQASFYADCQRLLGEKGILVHQSESPLIHLDLLNKM 208
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_EUBR3 (Spermidine synthase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=speE PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.125e-21 Identity = 59/184 (32.07%), Postives = 93/184 (50.54%), Query Frame = 1 Query: 211 MWPGEAHSLKVK------EILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPK-----------------------------------TVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVL 639 MW + H++ VK E LF G+S+YQ++ VF+S +GK++ LDG + ++ DE Y EM+ H+P+ P+ K V +++FPE+A G ED R+ + D + FLR+ EYD II DS+DP+G + L K F+ + KAL+ G++ Sbjct: 3 MWFSQYHTVNVKLDVRIQEQLFSGQSDYQKIDVFKSYEFGKMVALDGEIVFSDTDEFIYDEMVTHVPMAVHPNAKRILIIGGGDGGVAKELIKYPSVEHIDVVETDKMFVDVCRRFFPEVACGLEDERISMFYDDGLRFLRR-KHDEYDLIINDSTDPLGHTEGLFTKEFYGSCYKALKDDGIM 185 The following BLAST results are available for this feature:
BLAST of FC931395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931395 ID=FC931395; Name=FC931395; organism=Citrus clementina; type=EST; length=712bpback to top |