FC931395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_BACSU (Spermidine synthase OS=Bacillus subtilis GN=speE PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.388e-21 Identity = 59/188 (31.38%), Postives = 95/188 (50.53%), Query Frame = 1 Query: 232 SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 ++KV + L ++E+Q + + E+ +G +L LDG+V +EKDE Y EM+AH+PL + P+P+ V SKK+ P +A +DPRV + + D + + +YD I+VDS++PVGPA L K F+ IAKAL+ G+ ++ W LI ++ Sbjct: 17 TMKVNKTLHTEQTEFQHLEMVETEEFGNMLFLDGMVMTSEKDEFVYHEMVAHVPLFTHPNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAK-SENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNV 203
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_BACC1 (Spermidine synthase OS=Bacillus cereus (strain ATCC 10987) GN=speE PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.388e-21 Identity = 58/192 (30.21%), Postives = 95/192 (49.48%), Query Frame = 1 Query: 238 KVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 708 ++ L ++E+Q++ + E+ +G +L+LDG+V TEKDE Y EM+AH+PL + P+P+ V SK+Y P +A ++ RV + +GD + + EYD I+VDS++PVGPA L K F+ I+KAL+ G+ ++ W LI + +E Sbjct: 18 RINRTLHTEQTEFQKLDMVETEEFGNMLILDGMVMTTEKDEFVYHEMVAHVPLFTHPNPENVLVVGGGDGGVIREVLKHPSVKKATLVEIDGKVIEYSKQYLPSIAGALDNERVEVKVGDGFLHIAE-SENEYDVIMVDSTEPVGPAVNLFTKGFYAGISKALKEDGIFVAQTDNPWFTPELITTVFKDVKE 208
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE1_BACCR (Spermidine synthase 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=speE1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.388e-21 Identity = 58/192 (30.21%), Postives = 95/192 (49.48%), Query Frame = 1 Query: 238 KVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 708 ++ L ++E+Q++ + E+ +G +L+LDG+V TEKDE Y EM+AH+PL + P+P+ V SK+Y P +A ++ RV + +GD + + EYD I+VDS++PVGPA L K F+ I+KAL+ G+ ++ W LI + +E Sbjct: 18 RINRTLHTEQTEFQKLDMVETEEFGNMLILDGMVMTTEKDEFVYHEMVAHVPLFTHPNPENVLIVGGGDGGVIREVLKHPSVKKATLVEIDGKVIEYSKQYLPSIAGALDNERVEVKVGDGFLHIAE-SENEYDVIMVDSTEPVGPAVNLFTKGFYAGISKALKEDGIFVAQTDNPWFTPELITTVFKDVKE 208
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE1_BACAN (Spermidine synthase 1 OS=Bacillus anthracis GN=speE1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.388e-21 Identity = 58/192 (30.21%), Postives = 95/192 (49.48%), Query Frame = 1 Query: 238 KVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 708 ++ L ++E+Q++ + E+ +G +L+LDG+V TEKDE Y EM+AH+PL + P+P+ V SK+Y P +A ++ RV + +GD + + EYD I+VDS++PVGPA L K F+ I+KAL+ G+ ++ W LI + +E Sbjct: 18 RINRTLHTEQTEFQKLDMVETEEFGNMLILDGMVMTTEKDEFVYHEMVAHVPLFTHPNPENVLVVGGGDGGVIREVLKHPSVKKATLVEIDGKVIEYSKQYLPSIAGALDNERVEVKVGDGFLHIAE-SENEYDVIMVDSTEPVGPAVNLFTKGFYAGISKALKEDGIFVAQTDNPWFTPELITTVFKDVKE 208
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_XANAC (Spermidine synthase OS=Xanthomonas axonopodis pv. citri GN=speE PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.036e-21 Identity = 60/192 (31.25%), Postives = 93/192 (48.44%), Query Frame = 1 Query: 220 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 G A ++ L + +S +Q++ ++++ +GK++++DG V LT +D Y EMI+H L + P+PK V S+KYFPEL D R L D V ++ G D +IVDS+DPVGPA+ L K F+++ KAL+ G+L +ES LI +M Sbjct: 16 GSAIGFRISGKLDEVQSPFQKIEIYQTTDWGKLMLIDGAVMLTSRDNFFYHEMISHPALFTHPAPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPELCDSNHDARAELLFDDGVAYMANCQAGSVDIVIVDSTDPVGPAEGLFNKAFYESCFKALKDDGILVQQSESPLALLDLINEM 207
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_ALHEH (Spermidine synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=speE PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.036e-21 Identity = 60/189 (31.75%), Postives = 93/189 (49.21%), Query Frame = 1 Query: 220 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVS-----------------------------------KKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLI 681 G A SL+V+E L + ++ +Q + V+E+ A+G++LV+DG V LT +D Y EM++H L + P P+ V+ ++YFPEL +DPR L D V +++ P G D +IVDS+DPVG A+ L F + + L G++ +ES LH I Sbjct: 16 GMAFSLRVREKLHEERTAFQHIEVYETEAWGRLLVIDGCVMLTSRDNFVYHEMMSHPALFTHPDPRRVAIIGGGDCGMLREVLKHPGIESVVQVDIDAGVTRAAERYFPELTEANDDPRATLLFDDGVAWIQDQPAGSLDVVIVDSTDPVGVAEGLFGPGFLGQVYRVLGDQGLMVQQSESPILHRDTI 204
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_CLOBB (Spermidine synthase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=speE PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.190e-21 Identity = 63/190 (33.16%), Postives = 90/190 (47.37%), Query Frame = 1 Query: 211 MWPGEAH------SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 657 +W E H S+KV L+ +S++Q + + ES +GK LDG++ +TEKDE Y +MI H+P+ + P+ K V KKY P+ A E+ RV + D ++F+R EYD IIVDS+DP GP + L K F+ KAL G+L N ES Sbjct: 3 LWYTEKHTEYVKFSIKVDRELYTEQSKFQRIDILESKEFGKFFTLDGLMMVTEKDEFIYHDMIVHVPMATNPNIKNVLVIGAGDGGTIRELTRYKTIEKIDMVEIDERVVEVCKKYLPKTAGKLEEERVNIVYEDGLKFVRN-KENEYDLIIVDSTDPFGPGEGLFTKEFYGNCYKALSEDGILVNQHES 191
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_CLOB8 (Spermidine synthase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=speE PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.200e-20 Identity = 61/190 (32.11%), Postives = 92/190 (48.42%), Query Frame = 1 Query: 211 MWPGEAH------SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 657 +W E H S+KV++ + K+E+Q + V E+ +G+ LDG++ +TEKDE Y +MI H+P+ + P+ K V ++YFP + +D RV + D ++F+R EYD IIVDS+DP GP + L K F+ KALR G+L N ES Sbjct: 3 LWYTEQHTENVRFSIKVEKEIHTEKTEFQRIDVLEAKEFGRFFTLDGLMMVTEKDEFIYHDMIVHVPMATNPNIKNVLVIGAGDGGTIRELTRYSTVEKIDMVEIDKRVVDICREYFPLTSCKLDDKRVNVFYEDGLKFIRD-KEDEYDLIIVDSTDPFGPGEGLFTKEFYGNCYKALREDGILVNQHES 191
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_XYLFT (Spermidine synthase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=speE PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.047e-20 Identity = 61/205 (29.76%), Postives = 97/205 (47.32%), Query Frame = 1 Query: 181 TGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 T T + + G A +V L + +S +Q++ ++ S +GK++V+DG + LT +D Y EMI+H L + +PK V ++K+FPEL DPR L D V ++ P D IIVDS+DPVGPA+ L + F+++ +AL+ G+L +ES LI++M Sbjct: 3 TNDTWFTEHFQTTGSAIGFRVTGKLDEVQSPFQKIEIYNSTDWGKLMVIDGALMLTSRDNFLYHEMISHPALFTHTAPKCVVIIGGGDCGTLREVLKHPDIEQVTQCDIDEQVTRMAEKHFPELCTSNNDPRATLLFSDGVAYMADCPTNSVDVIIVDSTDPVGPAKGLFNRTFYESCFRALKNDGLLIQQSESPLALLELIKEM 207
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_XYLF2 (Spermidine synthase OS=Xylella fastidiosa (strain M23) GN=speE PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.047e-20 Identity = 61/205 (29.76%), Postives = 97/205 (47.32%), Query Frame = 1 Query: 181 TGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 T T + + G A +V L + +S +Q++ ++ S +GK++V+DG + LT +D Y EMI+H L + +PK V ++K+FPEL DPR L D V ++ P D IIVDS+DPVGPA+ L + F+++ +AL+ G+L +ES LI++M Sbjct: 3 TNDTWFTEHFQTTGSAIGFRVTGKLDEVQSPFQKIEIYNSTDWGKLMVIDGALMLTSRDNFLYHEMISHPALFTHTAPKCVVIIGGGDCGTLREVLKHPDIEQVTQCDIDEQVTRMAEKHFPELCTSNNDPRATLLFSDGVAYMADCPTNSVDVIIVDSTDPVGPAKGLFNRTFYESCFRALKNDGLLIQQSESPLALLELIKEM 207 The following BLAST results are available for this feature:
BLAST of FC931395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931395 ID=FC931395; Name=FC931395; organism=Citrus clementina; type=EST; length=712bpback to top |