FC931402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: KCAB1_MOUSE (Voltage-gated potassium channel subunit beta-1 OS=Mus musculus GN=Kcnab1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11 Identity = 58/220 (26.36%), Postives = 102/220 (46.36%), Query Frame = 2 Query: 80 LELRPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGS-LDQIVNETIPALQKQKEA--GKIRFIGITGLPLEIFTYMLDRVPPGAVDVILSYCHYSINDSTLEDLLPYLKSK-GVGVISASPLCMGL 718 ++ R LG +GLR+SC+G G G +S+ A + A+ G+N FDT+ Y +E +LG +K G R+ +++TK G+ S + + + SL RLQL+YVD++ + + + +++IV + + G R+ + + + +PP V ++ +E LP L K GVG ++ SPL G+ Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWVTFG--GQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPP----VCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGI 284
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: KCAB1_CHICK (Voltage-gated potassium channel subunit beta-1 OS=Gallus gallus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11 Identity = 59/220 (26.82%), Postives = 102/220 (46.36%), Query Frame = 2 Query: 80 LELRPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGS-LDQIVNETIPALQKQKEA--GKIRFIGITGLPLEIFTYMLDRVPPGAVDVILSYCHYSINDSTLEDLLPYLKSK-GVGVISASPLCMGL 718 ++ R LG +GLR+SC+G G G +S+ A + A+ G+N FDT+ Y +E +LG LK G R+ +++TK G+ S + + + SL RLQL+YVD++ + + + +++IV + + G R+ + + + +PP V ++ +E LP L K GVG ++ SPL G+ Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWVTFG--GQISDEVAEQLMTIAYESGVNLFDTAEVYAAGKAEVILGNILKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLRASLQRLQLEYVDVVFANRPDNNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNLIPP----VCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGI 284
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: KCAB1_BOVIN (Voltage-gated potassium channel subunit beta-1 OS=Bos taurus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11 Identity = 58/220 (26.36%), Postives = 102/220 (46.36%), Query Frame = 2 Query: 80 LELRPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGS-LDQIVNETIPALQKQKEA--GKIRFIGITGLPLEIFTYMLDRVPPGAVDVILSYCHYSINDSTLEDLLPYLKSK-GVGVISASPLCMGL 718 ++ R LG +GLR+SC+G G G +S+ A + A+ G+N FDT+ Y +E +LG +K G R+ +++TK G+ S + + + SL RLQL+YVD++ + + + +++IV + + G R+ + + + +PP V ++ +E LP L K GVG ++ SPL G+ Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWVTFG--GQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPP----VCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGI 284
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: KCAB1_RABIT (Voltage-gated potassium channel subunit beta-1 OS=Oryctolagus cuniculus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11 Identity = 58/217 (26.73%), Postives = 100/217 (46.08%), Query Frame = 2 Query: 89 RPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGS-LDQIVNETIPALQKQKEA--GKIRFIGITGLPLEIFTYMLDRVPPGAVDVILSYCHYSINDSTLEDLLPYLKSK-GVGVISASPLCMGL 718 R LG +GLR+SC+G G G +S+ A + A+ G+N FDT+ Y +E +LG +K G R+ +++TK G+ S + + + SL RLQL+YVD++ + + + +++IV + + G R+ + + + +PP V ++ +E LP L K GVG ++ SPL G+ Sbjct: 92 RNLGKSGLRVSCLGLGTWVTFG--GQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPP----VCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGI 302
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: KCAB1_MUSPU (Voltage-gated potassium channel subunit beta-1 OS=Mustela putorius GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11 Identity = 58/217 (26.73%), Postives = 100/217 (46.08%), Query Frame = 2 Query: 89 RPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGS-LDQIVNETIPALQKQKEA--GKIRFIGITGLPLEIFTYMLDRVPPGAVDVILSYCHYSINDSTLEDLLPYLKSK-GVGVISASPLCMGL 718 R LG +GLR+SC+G G G +S+ A + A+ G+N FDT+ Y +E +LG +K G R+ +++TK G+ S + + + SL RLQL+YVD++ + + + +++IV + + G R+ + + + +PP V ++ +E LP L K GVG ++ SPL G+ Sbjct: 81 RNLGKSGLRVSCLGLGTWVTFG--GQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPP----VCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGI 291
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: KCAB1_HUMAN (Voltage-gated potassium channel subunit beta-1 OS=Homo sapiens GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11 Identity = 58/217 (26.73%), Postives = 100/217 (46.08%), Query Frame = 2 Query: 89 RPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGS-LDQIVNETIPALQKQKEA--GKIRFIGITGLPLEIFTYMLDRVPPGAVDVILSYCHYSINDSTLEDLLPYLKSK-GVGVISASPLCMGL 718 R LG +GLR+SC+G G G +S+ A + A+ G+N FDT+ Y +E +LG +K G R+ +++TK G+ S + + + SL RLQL+YVD++ + + + +++IV + + G R+ + + + +PP V ++ +E LP L K GVG ++ SPL G+ Sbjct: 92 RNLGKSGLRVSCLGLGTWVTFG--GQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPP----VCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGI 302
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11 Identity = 61/226 (26.99%), Postives = 103/226 (45.58%), Query Frame = 2 Query: 59 MAFPLRKLELRPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKCGRYVD------GFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGITGLPLEIFTYMLDRVPPGAVDVILSYCHYSINDSTLE-DLLPYLKSKGVGVISASPLCMG 715 M+ P RK+ GN + +GFG L ++G SE A + A LG F+D+S YG +E+ +G+ K G R E ++TK G + + + + +++D SL RL +D +D+ H S + + + + AL+K EAGKIR+IG++ P AV V Y +S+ E ++ + + ++ +PL G Sbjct: 1 MSIPTRKI-----GND--TVPAIGFGCMGLHAMYGPSSEEANQAVLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQTG-RRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVHRF---SGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQV--EYSPFSLEIERPEIGVMKACRENNITIVCYAPLGRG 213
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: KCAB2_BOVIN (Voltage-gated potassium channel subunit beta-2 OS=Bos taurus GN=KCNAB2 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11 Identity = 65/228 (28.51%), Postives = 108/228 (47.37%), Query Frame = 2 Query: 68 PLRKLEL-RPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGIT-GLPLEIF-TYMLDR----VPPGAVDVILSYCHYSINDSTLEDLLPYLKSK-GVGVISASPLCMGL 718 P R+L+ R LG +GLR+SC+G G G +++ A + A+ GIN FDT+ Y +E +LG +K G R+ +++TK G+ S + + + SL RLQL+YVD++ + + + + ET+ A+ G + G + +EI Y + R +PP + ++ +E LP L K GVG ++ SPL G+ Sbjct: 32 PKRQLQFYRNLGKSGLRVSCLGLGTWVTFG--GQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPD---PNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPP----ICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGI 250
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: KCAB2_RAT (Voltage-gated potassium channel subunit beta-2 OS=Rattus norvegicus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.761e-11 Identity = 65/228 (28.51%), Postives = 108/228 (47.37%), Query Frame = 2 Query: 68 PLRKLEL-RPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGIT-GLPLEIF-TYMLDR----VPPGAVDVILSYCHYSINDSTLEDLLPYLKSK-GVGVISASPLCMGL 718 P R+L+ R LG +GLR+SC+G G G +++ A + A+ GIN FDT+ Y +E +LG +K G R+ +++TK G+ S + + + SL RLQL+YVD++ + + + + ET+ A+ G + G + +EI Y + R +PP + ++ +E LP L K GVG ++ SPL G+ Sbjct: 32 PKRQLQFYRNLGKSGLRVSCLGLGTWVTFG--GQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPD---PNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPP----ICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGI 250
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: KCAB2_MOUSE (Voltage-gated potassium channel subunit beta-2 OS=Mus musculus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.761e-11 Identity = 65/228 (28.51%), Postives = 108/228 (47.37%), Query Frame = 2 Query: 68 PLRKLEL-RPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGIT-GLPLEIF-TYMLDR----VPPGAVDVILSYCHYSINDSTLEDLLPYLKSK-GVGVISASPLCMGL 718 P R+L+ R LG +GLR+SC+G G G +++ A + A+ GIN FDT+ Y +E +LG +K G R+ +++TK G+ S + + + SL RLQL+YVD++ + + + + ET+ A+ G + G + +EI Y + R +PP + ++ +E LP L K GVG ++ SPL G+ Sbjct: 32 PKRQLQFYRNLGKSGLRVSCLGLGTWVTFG--GQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPD---PNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPP----ICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGI 250 The following BLAST results are available for this feature:
BLAST of FC931402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931402 ID=FC931402; Name=FC931402; organism=Citrus clementina; type=EST; length=720bpback to top |