FC931404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931404 vs. ExPASy Swiss-Prot
Match: TCTP_TOBAC (Translationally-controlled tumor protein homolog OS=Nicotiana tabacum GN=TCTP PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.292e-26 Identity = 57/85 (67.06%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 5 DSFMLHELPAFDKNALVTYMKRFIKLLTPILSEERPEISEKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTF 259 D+F L E P+FDK V YMK++IK LTP L E+ E+ + NI+GATK+LLSKLSDLQFFVGESM DD +VFAYYK+GATDPTF Sbjct: 72 DTFRLQEQPSFDKKQFVAYMKKYIKNLTPKLGAEQEEVFKNNIQGATKYLLSKLSDLQFFVGESMADDTGMVFAYYKDGATDPTF 156
BLAST of FC931404 vs. ExPASy Swiss-Prot
Match: TCTP_ARATH (Translationally-controlled tumor protein homolog OS=Arabidopsis thaliana GN=TCTP PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 1.292e-26 Identity = 55/85 (64.71%), Postives = 66/85 (77.65%), Query Frame = 2 Query: 5 DSFMLHELPAFDKNALVTYMKRFIKLLTPILSEERPEISEKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTF 259 D+F L E P +DK + Y+K++IKLLTP LSEE + +K IEGATKFLL +LSD QFFVGE MHDD LVFAYYKEG+T+PTF Sbjct: 72 DTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKFLLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTF 156
BLAST of FC931404 vs. ExPASy Swiss-Prot
Match: TCTP_BRAOL (Translationally-controlled tumor protein homolog OS=Brassica oleracea GN=TCTP PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.412e-26 Identity = 54/85 (63.53%), Postives = 65/85 (76.47%), Query Frame = 2 Query: 5 DSFMLHELPAFDKNALVTYMKRFIKLLTPILSEERPEISEKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTF 259 D+F L E P +DK + Y+K++IKLLTP L+ E+ E +K IEGATKFLL KL D QFFVGE MHDD +VFAYYKEGAT+PTF Sbjct: 72 DTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLTPEQQEEFKKGIEGATKFLLPKLKDFQFFVGEGMHDDSTIVFAYYKEGATNPTF 156
BLAST of FC931404 vs. ExPASy Swiss-Prot
Match: TCTP_PSEMZ (Translationally-controlled tumor protein homolog OS=Pseudotsuga menziesii GN=TCTP PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.374e-26 Identity = 56/85 (65.88%), Postives = 66/85 (77.65%), Query Frame = 2 Query: 5 DSFMLHELPAFDKNALVTYMKRFIKLLTPILSEERPEISEKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTF 259 D+F L E P FDK + ++KR+IK L LSEER +KN+EGA K L+SKLSDLQFFVGESMHDDG +VFAYYK+GATDPTF Sbjct: 71 DTFRLQEQPPFDKKQFLGFIKRYIKNLATKLSEERQAEFKKNVEGAAKMLVSKLSDLQFFVGESMHDDGSMVFAYYKDGATDPTF 155
BLAST of FC931404 vs. ExPASy Swiss-Prot
Match: TCTP_HORVU (Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 8.374e-26 Identity = 55/85 (64.71%), Postives = 65/85 (76.47%), Query Frame = 2 Query: 5 DSFMLHELPAFDKNALVTYMKRFIKLLTPILSEERPEISEKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTF 259 D+F L E PAFDK + Y+KR+IK LT L E + +KN+E ATK+LLSKL DLQFFVGESMHDDG +VFAYY+EGA DPTF Sbjct: 72 DTFRLQEQPAFDKKQFIAYIKRYIKNLTAKLEGEELDAFKKNVESATKYLLSKLKDLQFFVGESMHDDGSVVFAYYREGAADPTF 156
BLAST of FC931404 vs. ExPASy Swiss-Prot
Match: TCTP_WHEAT (Translationally-controlled tumor protein homolog OS=Triticum aestivum GN=TCTP PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.437e-25 Identity = 54/85 (63.53%), Postives = 67/85 (78.82%), Query Frame = 2 Query: 5 DSFMLHELPAFDKNALVTYMKRFIKLLTPILSEERPEISEKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTF 259 D+F L E PAFDK +++MKR+IK L+ L + ++ +KN+E ATK+LLSKL DLQFFVGESMHDDG +VFAYYKEGA DPTF Sbjct: 72 DTFRLQEQPAFDKKQFISHMKRYIKNLSAKLEGDDLDVFKKNVESATKYLLSKLKDLQFFVGESMHDDGGVVFAYYKEGAADPTF 156
BLAST of FC931404 vs. ExPASy Swiss-Prot
Match: TCTP_MAIZE (Translationally-controlled tumor protein homolog OS=Zea mays GN=TCTP PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.337e-23 Identity = 51/85 (60.00%), Postives = 65/85 (76.47%), Query Frame = 2 Query: 5 DSFMLHELPAFDKNALVTYMKRFIKLLTPILSEERPEISEKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTF 259 D+F L E P FDK + V+Y+K++IK LT +L E+ + +K +EGATKFLLSKL DLQFFVGESM DD + FAYYK+GAT+ TF Sbjct: 71 DTFRLQEQPPFDKKSFVSYIKKYIKNLTAVLEPEKADEFKKGVEGATKFLLSKLKDLQFFVGESMKDDASVAFAYYKDGATNSTF 155
BLAST of FC931404 vs. ExPASy Swiss-Prot
Match: TCTP_CUCME (Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.081e-23 Identity = 50/85 (58.82%), Postives = 63/85 (74.12%), Query Frame = 2 Query: 5 DSFMLHELPAFDKNALVTYMKRFIKLLTPILSEERPEISEKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTF 259 D+F L E P+ DK ++ +K++IK LTP+L E+ E + IEGA K+LL K+ DLQFFVGESM DD +VFAYYKEGATDPTF Sbjct: 72 DTFRLQEQPSMDKKVFLSCIKKYIKKLTPLLQGEQQEAFKNKIEGAVKYLLPKVKDLQFFVGESMADDSAMVFAYYKEGATDPTF 156 The following BLAST results are available for this feature:
BLAST of FC931404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931404 ID=FC931404; Name=FC931404; organism=Citrus clementina; type=EST; length=261bpback to top |