FC931405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931405 vs. ExPASy Swiss-Prot
Match: PSB9_BOVIN (Proteasome subunit beta type-9 OS=Bos taurus GN=PSMB9 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.901e-13 Identity = 45/145 (31.03%), Postives = 75/145 (51.72%), Query Frame = 3 Query: 237 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYK 671 TGTTI+ + F GV++G+D+R + G V ++ +K+ + +IYC +G+AAD +A+ DM + QL+LH V+ A +++ + Y+ + A L++ G D G PFA GSGS ++ YK Sbjct: 19 TGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQHIYCALSGSAADAQAIADMAAYQLELHGMELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQREGGQVYGTMSGMLIRQPFAIGGSGSTYIYGYVDAAYK 163
BLAST of FC931405 vs. ExPASy Swiss-Prot
Match: PSB9_RAT (Proteasome subunit beta type-9 OS=Rattus norvegicus GN=Psmb9 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.483e-13 Identity = 47/146 (32.19%), Postives = 77/146 (52.74%), Query Frame = 3 Query: 237 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYK 671 TGTTI+ + F GV++G+D+R + G V ++ +K+ + IYC +G+AAD +A+ DM + QL+LH V+ A ++K + Y+ + A L++ G D G ++ G PFA GSGS ++ YK Sbjct: 19 TGTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANIVKNISYKYREDLLAHLMVAGWDQHEGGQVYGTM-GGMLIRQPFAIGGSGSTYIYGYVDAAYK 163
BLAST of FC931405 vs. ExPASy Swiss-Prot
Match: PSB9_MUSMB (Proteasome subunit beta type-9 OS=Mus musculus bactrianus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12 Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 3 Query: 237 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYK 671 TGTTI+ + F GV++G+D+R + G V ++ +K+ + I+C +G+AAD +A+ DM + QL+LH V+ A ++K + Y+ + A L++ G D G PF GSGS ++ YK Sbjct: 19 TGTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGTMGGMLIRQPFTISGSGSSYIYGYVDAAYK 163
BLAST of FC931405 vs. ExPASy Swiss-Prot
Match: PSMB_PYRFU (Proteasome subunit beta OS=Pyrococcus furiosus GN=psmB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12 Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 3 Query: 240 GTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHL-----FNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYK 671 GTT VGL+ ++GV+L ADTRA+ G I+ KN KIH + ++ GAG D + ++ ++ L++ G+E V TLL L F Y G+ ++GG D P L ++ G +A GSG A ++ +S+Y+ Sbjct: 10 GTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGW----FLVGGYD-EKPRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYR 153
BLAST of FC931405 vs. ExPASy Swiss-Prot
Match: PSMB_ARCFU (Proteasome subunit beta OS=Archaeoglobus fulgidus GN=psmB PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12 Identity = 42/145 (28.97%), Postives = 74/145 (51.03%), Query Frame = 3 Query: 240 GTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY-VQAALVLGGVDCTGPHLHTIYP-HGSTDTLPFATMGSGSLAAMAMFESKY 668 GTT VGL+ +DGV++ + RAT G + K +KI+ +A + AG+ D + + ++ + L+ R+ V TL L +Y+ + L++GG+D G +++I P G+ + GSGSL A + E ++ Sbjct: 11 GTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRF 155
BLAST of FC931405 vs. ExPASy Swiss-Prot
Match: PSMB_METTE (Proteasome subunit beta OS=Methanosarcina thermophila GN=psmB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12 Identity = 42/147 (28.57%), Postives = 77/147 (52.38%), Query Frame = 3 Query: 240 GTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY--VQAALVLGGVDCTGPHLHTI-YPHGSTDTLPFATMGSGSLAAMAMFESKYK 671 GTT VG++ DG++L ++ RAT G + K +K++ + + AG+ D + + +VS + QL++ ES + +T L + + Y + L++GGVD GP ++++ GS + + GSGS A + E +Y+ Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRD-ESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDKNGPGIYSLDAMGGSIEETRISATGSGSPMAYGVLEDQYR 154
BLAST of FC931405 vs. ExPASy Swiss-Prot
Match: PSMB_METJA (Proteasome subunit beta OS=Methanocaldococcus jannaschii GN=psmB PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12 Identity = 48/148 (32.43%), Postives = 76/148 (51.35%), Query Frame = 3 Query: 240 GTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY-VQAALVLGGVD-CTGPHLHTIYP-HGSTDTLPFATMGSGSLAAMAMFESKYKR 674 GTT VGLI D VIL D RA+ G +V DK +K++ + I AG+ D +A+ ++ ++ +L++ TGR + TLL L + + + +++GG D G L ++ P G + F GSGS A + E+ Y R Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDR 153
BLAST of FC931405 vs. ExPASy Swiss-Prot
Match: PSB9_MUSSI (Proteasome subunit beta type-9 OS=Mus spicilegus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12 Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 3 Query: 237 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYK 671 TGTTI+ + F GV++G+D+R + G V ++ +K+ + I+C +G+AAD +A+ DM + QL+LH V+ A ++K + Y+ + A L++ G D G PF GSGS ++ YK Sbjct: 19 TGTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGTMGGMLIRQPFTIGGSGSSYIYGYVDAAYK 163
BLAST of FC931405 vs. ExPASy Swiss-Prot
Match: PSB9_MUSPL (Proteasome subunit beta type-9 OS=Mus platythrix GN=Psmb9 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12 Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 3 Query: 237 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYK 671 TGTTI+ + F GV++G+D+R + G V ++ +K+ + I+C +G+AAD +A+ DM + QL+LH V+ A ++K + Y+ + A L++ G D G PF GSGS ++ YK Sbjct: 19 TGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGTMGGMLIRQPFTIGGSGSSYIYGYVDAAYK 163
BLAST of FC931405 vs. ExPASy Swiss-Prot
Match: PSB9_MUSDU (Proteasome subunit beta type-9 OS=Mus dunni GN=Psmb9 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12 Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 3 Query: 237 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYK 671 TGTTI+ + F GV++G+D+R + G V ++ +K+ + I+C +G+AAD +A+ DM + QL+LH V+ A ++K + Y+ + A L++ G D G PF GSGS ++ YK Sbjct: 19 TGTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGTMGGMLIRQPFTIGGSGSSYIYGYVDAAYK 163 The following BLAST results are available for this feature:
BLAST of FC931405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931405 ID=FC931405; Name=FC931405; organism=Citrus clementina; type=EST; length=724bpback to top |