FC931412
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: SCMC1_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.149e-19 Identity = 67/231 (29.00%), Postives = 112/231 (48.48%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYNGIADCFRRTAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASDGIAGLYRGFGPSVLGIVVYRGLYFGMYDSIKPVLLVGPLEGSFLASFLL----GWTVTTGAGVASYPLDTVRRRM 682 GGV+ AVS+T AP++R+K+ +Q + L NG F++ GV SLWRGN NVI+ P A+ F + YK + + +DG +Y ++ +TRL + + +G Q++G+ D +K L +G+ Y+G+ P++LGI+ Y G+ +Y+++K L + + L+ G +T +ASYPL +R RM Sbjct: 202 GGVAGAVSRTGTAPLDRMKVFMQVHSSKTNKISL---VNG----FKQMIKEGGVASLWRGNGVNVIKIAPETAIKFMAYEQYKKLLS----KDGGKVQSHERFMAGSLAGATAQTAIYPMEVMKTRL-----TLRKTG--QYSGMFDCAKKILRKEGVKAFYKGYVPNILGIIPYAGIDLAVYETLKNTWLSHYAKDTANPGVLVLLGCGTISSTCGQLASYPLALIRTRM 414
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: SCMC1_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.112e-19 Identity = 68/231 (29.44%), Postives = 112/231 (48.48%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYNGIADCFRRTAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASDGIAGLYRGFGPSVLGIVVYRGLYFGMYDSIKPVLLVGPLEGSFLASFLL----GWTVTTGAGVASYPLDTVRRRM 682 GGV+ AVS+T+ AP++R+K+++Q G K N I F++ G+ SLWRGN NVI+ P A+ F + YK + + + G + + F+Y ++ +TRLA Q++G+ D +K L +G+ Y+G+ P++LGI+ Y G+ +Y+ +K L + S ++ G +T +ASYPL VR RM Sbjct: 201 GGVAGAVSRTSTAPLDRLKVMMQ------VHGSKSAKMN-IYGGFQQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKIGTFERFVSGSMAGATAQT----FIYPMEVLKTRLAVGKTG-------QYSGMFDCAKKILKYEGMGAFYKGYVPNLLGIIPYAGIDLAVYELLKSHWLDNFAKDSVNPGVMVLLGCGALSSTCGQLASYPLALVRTRM 413
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: GDC_MOUSE (Graves disease carrier protein homolog OS=Mus musculus GN=Slc25a16 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.112e-19 Identity = 70/244 (28.69%), Postives = 106/244 (43.44%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYNGIADCFRRTAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASD-GIAGLYRGFGPSVLGIVVYRGLYFGMYDSIK-------PVLLVGP-------LEGSFLASFLLGWTVTTGAGVASYPLDTVRRRMMM 688 GG++ +KT AP++R+K+L+Q + K + G+ R EG + L++GN A +IR FP A+ F + YK+ K G+ +M Y LD R RLA K GE ++G++ ++ A + G G YRG P++LG+ Y G+ F + ++K P LL P L + L G A SYP D RRRM + Sbjct: 43 GGIAGCCAKTTVAPLDRVKVLLQAHNRHYK-------HLGVLSTLRAVPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTFITTKLGVSGHVHRLMAGSMAGMTAVIC----TYPLDVVRVRLAFQVK-----GEHTYSGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSYAPALLGRPSSDNPNVLVLKTHINLLCGGVAGAIAQTISYPFDVTRRRMQL 270
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: SCMC1_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.014e-19 Identity = 63/231 (27.27%), Postives = 109/231 (47.19%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYNGIADCFRRTAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASDGIAGLYRGFGPSVLGIVVYRGLYFGMYDSIKPVLLVGPLEGSFLASFLL----GWTVTTGAGVASYPLDTVRRRM 682 GG++ AVS+T AP++R+K+++Q + I ++ G+ SLWRGN NVI+ P A+ F + YK +F + + G A+ + +Y ++ +TRLA Q++G+ D +K + +G+ Y+G+ P++LGI+ Y G+ +Y+++K L S L+ G +T +ASYPL +R RM Sbjct: 201 GGMAGAVSRTGTAPLDRLKVMMQVHGS--------KGNANIITGLKQMVKEGGIRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESGKLGTAERFIAGSLAGATAQTS----IYPMEVLKTRLAVGKTG-------QYSGMFDCAKKIMQREGVRAFYKGYIPNILGIIPYAGIDLAIYETLKTFWLQNYATDSANPGVLVLLGCGTASSTCGQLASYPLALIRTRM 412
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: S2542_RAT (Solute carrier family 25 member 42 OS=Rattus norvegicus GN=Slc25a42 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.161e-19 Identity = 71/250 (28.40%), Postives = 108/250 (43.20%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYNGIADCFRR---TAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASDGIAGLYRGFGPSVLGIVVYRGLYFGMYDSIKPV--LLVGPLEGSFLASFLLGWTVTTGAGVASYPLDTVRRRMMMTSGEAVKYSSSLDAAR 736 G ++ A++KTA AP++R K++ Q + K + FR T EG +SLWRGN+A ++R P A+ F+ + YK + + G A Y LD R R+A K ++ + V+ + +G+ LY GF P+VLG++ Y GL F Y+S+K + G + + G ASYPLD VRRRM ++ S L R Sbjct: 40 GALAGALAKTAVAPLDRTKIIFQ----------VSSKRFSAKEAFRLLYFTYLNEGFLSLWRGNSATMVRVIPYAAIQFSAHEEYKRILGHYYGFRGEALPPWPRLLAGALAGTTAASLTYPLDLVRARMAVTPKE-------MYSNIFHVFIRISREEGLKTLYFGFTPTVLGVIPYAGLSFFTYESLKSLHREYSGRPQPYPFERMVFGACAGLIGQSASYPLDVVRRRMQTAGVTGHQHGSILSTLR 272
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: S2542_MOUSE (Solute carrier family 25 member 42 OS=Mus musculus GN=Slc25a42 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.161e-19 Identity = 71/250 (28.40%), Postives = 108/250 (43.20%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYNGIADCFRR---TAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASDGIAGLYRGFGPSVLGIVVYRGLYFGMYDSIKPV--LLVGPLEGSFLASFLLGWTVTTGAGVASYPLDTVRRRMMMTSGEAVKYSSSLDAAR 736 G ++ A++KTA AP++R K++ Q + K + FR T EG +SLWRGN+A ++R P A+ F+ + YK + + G A Y LD R R+A K ++ + V+ + +G+ LY GF P+VLG++ Y GL F Y+S+K + G + + G ASYPLD VRRRM ++ S L R Sbjct: 40 GALAGALAKTAVAPLDRTKIIFQ----------VSSKRFSAKEAFRLLYFTYLNEGFLSLWRGNSATMVRVIPYAAIQFSAHEEYKRILGHYYGFRGEALPPWPRLLAGALAGTTAASLTYPLDLVRARMAVTPKE-------MYSNIFHVFIRISREEGLKTLYFGFTPTVLGVIPYAGLSFFTYESLKSLHREYSGRPQPYPFERMVFGACAGLIGQSASYPLDVVRRRMQTAGVTGHQHGSILSTLR 272
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: GDC_BOVIN (Graves disease carrier protein OS=Bos taurus GN=SLC25A16 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.161e-19 Identity = 69/244 (28.28%), Postives = 106/244 (43.44%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYNGIADCFRRTAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASD-GIAGLYRGFGPSVLGIVVYRGLYFGMYDSIK-------PVLLVGP-------LEGSFLASFLLGWTVTTGAGVASYPLDTVRRRMMM 688 GG++ +KT AP++R+K+L+Q + + + G+ R EG + L++GN A +IR FP A+ F + YK++ K G+ +M Y LD R RLA K GE + G++ ++ A + G G YRG P++LG+ Y G+ F + ++K P LL P L + L G A SYP D RRRM + Sbjct: 41 GGIAGCCAKTTVAPLDRVKVLLQAHNHHYR-------HLGVFSTLRAVPKKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGVSGHVHRLMAGSMAGMTAVIC----TYPLDMVRVRLAFQVK-----GEHTYTGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSYAPTLLGRPSSDNPNVLVLKTHINLLCGGVAGAIAQTISYPFDVTRRRMQL 268
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: SCMC1_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.196e-18 Identity = 68/231 (29.44%), Postives = 108/231 (46.75%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYNGIADCFRRTAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASDGIAGLYRGFGPSVLGIVVYRGLYFGMYDSIKPVLLVGPLEGSFLASFLL----GWTVTTGAGVASYPLDTVRRRM 682 GGV+ AVS+T+ AP++R+K+++Q K I FR+ G+ SLWRGN NVI+ P A+ F + YK + +G F+Y ++ +TRLA AK+ Q++G+ +K L +G Y+G+ P++LGI+ Y G+ +Y+ +K L + S ++ G +T +ASYPL VR RM Sbjct: 201 GGVAGAVSRTSTAPLDRLKVMMQVHGS---------KSMNIFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLT----EEGQKLGTFERFISGSMAGATAQTFIYPMEVLKTRLAV-AKTG------QYSGIYGCAKKILKHEGFGAFYKGYIPNLLGIIPYAGIDLAVYELLKSYWLDNFAKDSVNPGVMVLLSCGALSSTCGQLASYPLALVRTRM 411
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: MCFP_DICDI (Mitochondrial substrate carrier family protein P OS=Dictyostelium discoideum GN=mcfP PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18 Identity = 61/233 (26.18%), Postives = 100/233 (42.92%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYNGIADCFRRTAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASDGIAGLYRGFGPSVLGIVVYRGLYFGMYDSIKPVLLV------GPLEGSFLASFLLGWTVTTGAGVASYPLDTVRRRM 682 GG++ +K+A AP+ER+K+L Q + E+ N + + EG+ LWRGN+A ++R FP A+ F +T K+ K Y LD R RLA + + + T DG+ G+YRG P+++GI+ Y G+ F ++ +K + + G + G++ + G A +YP D VRRR+ Sbjct: 21 GGLAGVTAKSAVAPLERVKILYQIKSELYS-------LNSVYGSMLKIVENEGIKGLWRGNSATILRVFPYAAVQFLSYETIKNHLVADKSSS------FQIFLAGSAAGGIAVCATYPLDLLRARLAIEIHKKPTKPHH-------LLKSTFTKDGVKGIYRGIQPTLIGILPYGGISFSTFEFLKRIAPLNEIDENGQISGTY--KLIAGGIAGGVAQTVAYPFDVVRRRV 231
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: SCMC2_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Homo sapiens GN=SLC25A25 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.755e-18 Identity = 66/232 (28.45%), Postives = 111/232 (47.84%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYN-GIADCFRRTAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASDGIAGLYRGFGPSVLGIVVYRGLYFGMYDSIKPVLL----VGPLEGSFLASFLLGWTVTTGAGVASYPLDTVRRRM 682 GG + AVS+T AP++R+K+L+Q R N GI F + G SLWRGN NV++ P A+ F + K + ++ + ++ +Y ++ +TR+A + +G Q++G++D R+ LA +G+A Y+G+ P++LGI+ Y G+ +Y+++K L V + G +T +ASYPL VR RM Sbjct: 193 GGGAGAVSRTCTAPLDRLKVLMQVH--------ASRSNNMGIVGGFTQMIREGGARSLWRGNGINVLKIAPESAIKFMAYEQIKRLVGSDQETLRIHERLVAGSLAGAIAQSS----IYPMEVLKTRMA-----LRKTG--QYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQHYAVNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRM 405 The following BLAST results are available for this feature:
BLAST of FC931412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931412 ID=FC931412; Name=FC931412; organism=Citrus clementina; type=EST; length=736bpback to top |