FC931412
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: CMC2_CAEEL (Putative calcium-binding mitochondrial carrier F55A11.4 OS=Caenorhabditis elegans GN=F55A11.4 PE=5 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.755e-18 Identity = 68/246 (27.64%), Postives = 109/246 (44.31%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYNGIADCFRRTAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASDGIAGLYRGFGPSVLGIVVYRGLYFGMYDSIKPVLL----VGPLEGSFLASFLLGWTVTTGAGVASYPLDTVRRRMMMTSGEAVKYSSSLD 727 GG + AVS+T AP +RIK+ +Q K RL G+ C + A G+ S WRGN NVI+ P A+ F D K + KK + + + +Y ++ +TRLA + +G+ G++ K +GI Y+G+ P+++GI+ Y G+ +Y+++K + E LA G +T ++SYP VR R+ S +YS D Sbjct: 255 GGAAGAVSRTCTAPFDRIKVYLQVNSS--KTNRL-----GVMSCLKLLHAEGGIKSFWRGNGINVIKIAPESAIKFMCYDQLKRLIQKKKGNEEISTF--ERLCAGSAAGAISQSTIYPMEVMKTRLA-----LRKTGQLD-RGIIHFAHKMYTKEGIRCFYKGYLPNLIGIIPYAGIDLAIYETLKRTYVRYYETNSSEPGVLALLACGTCSSTCGQLSSYPFALVRTRLQALS--ITRYSPQPD 483
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: S2542_HUMAN (Solute carrier family 25 member 42 OS=Homo sapiens GN=SLC25A42 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.013e-17 Identity = 67/232 (28.88%), Postives = 102/232 (43.97%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYNGIADCFR---RTAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASDGIAGLYRGFGPSVLGIVVYRGLYFGMYDSIKPV--LLVGPLEGSFLASFLLGWTVTTGAGVASYPLDTVRRRM 682 G ++ A++KTA AP++R K++ Q + K + FR T EG +SLWRGN+A ++R P A+ F+ + YK + G A Y LD R R+A K ++ + V+ + +G+ LY GF P+VLG++ Y GL F Y+++K + G + + G ASYPLD VRRRM Sbjct: 40 GALAGALAKTAVAPLDRTKIIFQ----------VSSKRFSAKEAFRVLYYTYLNEGFLSLWRGNSATMVRVVPYAAIQFSAHEEYKRILGSYYGFRGEALPPWPRLFAGALAGTTAASLTYPLDLVRARMAVTPKE-------MYSNIFHVFIRISREEGLKTLYHGFMPTVLGVIPYAGLSFFTYETLKSLHREYSGRRQPYPFERMIFGACAGLIGQSASYPLDVVRRRM 254
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: TAAC_ARATH (Thylakoid ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana GN=TAAC PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17 Identity = 71/245 (28.98%), Postives = 106/245 (43.27%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYNGIADCFRRTAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASDGIAGLYRGFGPSVLGIVVYRGLYFGMYDSIKPVL--LVGPLEGSFLASFLLGWTVTTGAGVASYPLDTVRRRMMMTSGEAVKYSSSLDA 730 G + A +K+ AP++RIKLL+Q Q + +K G + EG+ W+GN VIR P A+ +TYK +F + +DG ++ Y LD R RLA E + + V L +G+A Y G GPS+L I Y + F ++D +K L S L + ++ + TG YPLDT+RR+M + + Y S LDA Sbjct: 122 GAFAGAAAKSVTAPLDRIKLLMQTHGVRAGQ-QSAKKAIGFIEAITLIGKEEGIKGYWKGNLPQVIRIVPYSAVQLFAYETYKKLF---RGKDGQLS-VLGRLGAGACAGMTSTLITYPLDVLRLRLA---------VEPGYRTMSQVALNMLREEGVASFYNGLGPSLLSIAPYIAINFCVFDLVKKSLPEKYQQKTQSSLLTAVVAAAIATG---TCYPLDTIRRQMQL---KGTPYKSVLDA 346
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: GDC_RAT (Graves disease carrier protein (Fragment) OS=Rattus norvegicus GN=Slc25a16 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17 Identity = 68/244 (27.87%), Postives = 104/244 (42.62%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYNGIADCFRRTAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASD-GIAGLYRGFGPSVLGIVVYRGLYFGMYDSIK-------PVLLVGP-------LEGSFLASFLLGWTVTTGAGVASYPLDTVRRRMMM 688 G ++ +KT AP++R+K+L+Q + K + G+ R EG + L++GN A +IR FP A+ F + YK+ K G+ +M Y LD R RLA K GE ++G++ ++ A + G G YRG P++LG+ Y + F + ++K P LL P L + L G A SYP D RRRM + Sbjct: 43 GSIAGCCAKTTVAPLDRVKVLLQAHNHHYK-------HLGVLSPLRAVPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTFITTKLGVSGHVHRLMAGSMAGKMSMTAVIC-TYPLDVVRVRLAFQVK-----GEHTYSGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYASVSFFTFGTLKSVGLSYAPTLLGRPSSDNPNVLVLKTHINLLCGGVARAIAQTISYPFDVTRRRMQL 273
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: SCMC2_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Bos taurus GN=SLC25A25 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.027e-17 Identity = 66/232 (28.45%), Postives = 110/232 (47.41%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYNG-IADCFRRTAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASDGIAGLYRGFGPSVLGIVVYRGLYFGMYDSIKPVLL----VGPLEGSFLASFLLGWTVTTGAGVASYPLDTVRRRM 682 GG + AVS+T AP++R+K+L+Q R N I F + G SLWRGN NV++ P A+ F + K + ++ + ++ +Y ++ +TR+A + +G Q++G++D RK LA +G+A Y+G+ P++LGI+ Y G+ +Y+++K L V + G +T +ASYPL VR RM Sbjct: 193 GGGAGAVSRTCTAPLDRLKVLMQVH--------ASRSNNMCIVGGFTQMIREGGARSLWRGNGINVLKIAPESAIKFMAYEQIKRLIGSDQETLRIHERLVAGSLAGAIAQSS----IYPMEVLKTRMA-----LRKTG--QYSGMLDCARKILAREGMAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQRYAVNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRM 405
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: SCMC2_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Mus musculus GN=Slc25a25 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.565e-17 Identity = 65/232 (28.02%), Postives = 110/232 (47.41%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYNG-IADCFRRTAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASDGIAGLYRGFGPSVLGIVVYRGLYFGMYDSIKPVLL----VGPLEGSFLASFLLGWTVTTGAGVASYPLDTVRRRM 682 GG + AVS+T AP++R+K+L+Q R N I F + G SLWRGN NV++ P A+ F + K + ++ + ++ +Y ++ +TR+A + +G Q++G++D R+ LA +G+A Y+G+ P++LGI+ Y G+ +Y+++K L V + G +T +ASYPL VR RM Sbjct: 193 GGGAGAVSRTCTAPLDRLKVLMQVH--------ASRSNNMCIVGGFTQMIREGGAKSLWRGNGINVLKIAPESAIKFMAYEQMKRLVGSDQETLRIHERLVAGSLAGAIAQSS----IYPMEVLKTRMA-----LRKTG--QYSGMLDCARRILAKEGVAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRM 405
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: SCMC2_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus tropicalis GN=slc25a25 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.120e-16 Identity = 63/232 (27.16%), Postives = 109/232 (46.98%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYN-GIADCFRRTAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASDGIAGLYRGFGPSVLGIVVYRGLYFGMYDSIKPVLL----VGPLEGSFLASFLLGWTVTTGAGVASYPLDTVRRRM 682 GG + AVS+T AP++R+K+L+Q R N + F + G+ SLWRGN NVI+ P A+ F + K + ++ G + ++ +Y ++ +TR+A + +G Q+ G++D +K L +G++ Y+G+ P++LGI+ Y G+ +Y+++K L + G +T +ASYPL VR RM Sbjct: 237 GGGAGAVSRTCTAPLDRLKVLMQVH--------ASRSNNMSMLGGFTQMIREGGIRSLWRGNGINVIKIAPESAIKFMAYEQMKRIIGSDQETLGIHERLVAGSLAGVIAQSS----IYPMEVLKTRMA-----LRKTG--QYQGMLDCGKKILLKEGVSAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQRYATSSADPGVFVLLACGTISSTCGQLASYPLALVRTRM 449
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: SCM2A_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-A OS=Danio rerio GN=slc25a25a PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.463e-16 Identity = 67/231 (29.00%), Postives = 114/231 (49.35%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYNGIADCFRRTAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASDGIAGLYRGFGPSVLGIVVYRGLYFGMYDSIKPVLLVG-PLEGSFLASFLL---GWTVTTGAGVASYPLDTVRRRM 682 GG + AVS+T AP++R+K+L+Q QG+ +G+ + GV SLWRGN NVI+ P AL F + K + ++ G ++ + +Y ++ +TRLA + +G Q+ G+ D + L ++G++ Y+G+ P++LGI+ Y G+ +Y+++K L E + F+L G +T +ASYPL +R RM Sbjct: 193 GGGAGAVSRTCTAPLDRLKVLMQVHG---CQGKSMCLMSGLTQMIKEG----GVRSLWRGNGINVIKIAPETALKFMAYEQIKRVMGSSQETLGISERFVAGSLAGVIAQST----IYPMEVLKTRLA-----LRKTG--QYKGISDCAKHILKTEGMSAFYKGYVPNMLGIIPYAGIDLAVYETLKNTWLQRYGTENADPGVFVLLACGTVSSTCGQLASYPLALIRTRM 405
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: SCMC2_RAT (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Rattus norvegicus GN=Slc25a25 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.910e-16 Identity = 64/232 (27.59%), Postives = 110/232 (47.41%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYNG-IADCFRRTAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASDGIAGLYRGFGPSVLGIVVYRGLYFGMYDSIKPVLL----VGPLEGSFLASFLLGWTVTTGAGVASYPLDTVRRRM 682 GG + AVS+T AP++R+K+L+Q R N I F + G SLWRGN NV++ P A+ F + K + ++ + ++ +Y ++ +TR+A + +G Q++G++D ++ LA +G+A Y+G+ P++LGI+ Y G+ +Y+++K L V + G +T +ASYPL VR RM Sbjct: 193 GGGAGAVSRTCTAPLDRLKVLMQVH--------ASRSNNMCIIGGFTQMIREGGAKSLWRGNGINVLKIAPESAIKFMAYEQMKRLVGSDQETLRIHERLVAGSLAGAIAQSS----IYPMEVLKTRMA-----LRKTG--QYSGMLDCAKRILAKEGVAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRM 405
BLAST of FC931412 vs. ExPASy Swiss-Prot
Match: SCM2B_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-B OS=Danio rerio GN=slc25a25b PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.495e-16 Identity = 61/237 (25.74%), Postives = 105/237 (44.30%), Query Frame = 2 Query: 2 GGVSAAVSKTAAAPIERIKLLIQNQDEMLKQGRLDRKYNGIADCFRRTAAAEGVVSLWRGNTANVIRYFPTQALNFAFRDTYKSMFAYKKDRDGYAKWMMXXXXXXXXXXXXXXXFVYSLDYARTRLANDAKSSKGSGERQFNGLVDVYRKTLASDGIAGLYRGFGPSVLGIVVYRGLYFGMYDSIKPVLL----VGPLEGSFLASFLLGWTVTTGAGVASYPLDTVRRRMMMTSGE 700 GG + AVS+T AP++R+K+L+Q GIA F + G+ SLWRGN NV++ P A+ F + K + ++ G + ++ +Y ++ +TRLA Q++G+ D + +G+ Y+G+ P++LGI+ Y G+ +Y+++K L + G +T +ASYPL VR RM + + Sbjct: 193 GGGAGAVSRTCTAPLDRLKVLMQVHATRSNS-------MGIAGGFTQMIREGGLRSLWRGNGINVLKIAPESAIKFMAYEQIKRLIGSNQETLGILERLVSGSLAGAIAQSS----IYPMEVLKTRLALGRTG-------QYSGIADCAKHIFKKEGMTAFYKGYIPNMLGIIPYAGIDLAVYETLKNSWLQRFATDSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASQ 411 The following BLAST results are available for this feature:
BLAST of FC931412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931412 ID=FC931412; Name=FC931412; organism=Citrus clementina; type=EST; length=736bpback to top |