FC931414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB5B_HUMAN (Ras-related protein Rab-5B OS=Homo sapiens GN=RAB5B PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.355e-13 Identity = 41/111 (36.94%), Postives = 58/111 (52.25%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCCS 334 +QE+F K W+ E+ R AS ++ L GNK DL ++V YE A+A+AD+ + FMETSAK + V F+A+A + R V + Q KS CCS Sbjct: 104 NQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCS 214
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB5C_MOUSE (Ras-related protein Rab-5C OS=Mus musculus GN=Rab5c PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13 Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 2 Query: 8 ESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCCS 334 ++F K W+ E+ R AS N+ L GNK DL + + V ++ A+A+AD+ + FMETSAK + V + FMA+A + + R V ++ A +S CCS Sbjct: 107 DTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRTRGVDLQESNPASRSQCCS 215
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13 Identity = 33/81 (40.74%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 5 QESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRM 247 +++FN++ WL + YA+ N+ +L+GNK D+ + + VSYE + FADE G+ F+ETSAK ++ VE+AF+ A+ I +++ Sbjct: 90 RDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEKI 170
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13 Identity = 39/109 (35.78%), Postives = 61/109 (55.96%), Query Frame = 2 Query: 8 ESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASI-KDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 +SF N+ +WL ID +A+++V ++L+GNKCD+ +VV + A E GI F ETSAK + +E+AF+ +A I + +P+ N + G KS CC Sbjct: 95 KSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENV---DISSGGGVTGWKSKCC 200
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB5C_PONAB (Ras-related protein Rab-5C OS=Pongo abelii GN=RAB5C PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 2 Query: 8 ESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCCS 334 ++F K W+ E+ R AS N+ L GNK DL + + V ++ A+A+AD+ + FMETSAK + V + FMA+A + + R V ++ A +S CCS Sbjct: 107 DTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCS 215
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB5C_HUMAN (Ras-related protein Rab-5C OS=Homo sapiens GN=RAB5C PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 2 Query: 8 ESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCCS 334 ++F K W+ E+ R AS N+ L GNK DL + + V ++ A+A+AD+ + FMETSAK + V + FMA+A + + R V ++ A +S CCS Sbjct: 107 DTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCS 215
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 43/115 (37.39%), Postives = 59/115 (51.30%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRM------ASQPSMNNARPPTVQIKGQPVAQKSGC 328 +QESF V+ W +I Y+ DN +LVGNKCDL +VVS E + A ++G F E SAK++ V+Q F + I D+M +S P N P + P Q S C Sbjct: 106 NQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERLVDIICDKMNESLEPSSSPGSNGKGP---ALGDTPPPQPSSC 217
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB3D_HUMAN (Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 43/114 (37.72%), Postives = 60/114 (52.63%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRM-----ASQPSMNNARPPTVQIKGQPVAQKSGC 328 +QESF V+ W +I Y+ DN +LVGNKCDL +VV E + AD++G F E SAK++ V+Q F + I ++M S S +N + P V P Q S C Sbjct: 106 NQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESLEPSSSSGSNGKGPAV--GDAPAPQPSSC 217
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 35/77 (45.45%), Postives = 53/77 (68.83%), Query Frame = 2 Query: 5 QESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASI 235 +E+FN++ WL + ++A+ N+ +LVGNKCDL+ + VSYE + FA E G+ FME SAK + VE+AF+ A +I Sbjct: 91 RETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAI 167
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB10_PONAB (Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 39/109 (35.78%), Postives = 61/109 (55.96%), Query Frame = 2 Query: 8 ESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASI-KDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 +SF N+ +WL ID +A+++V ++L+GNKCD+ +VV + A E GI F ETSAK + +E+AF+ +A I + +P+ N + G KS CC Sbjct: 95 KSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENV---DISSGGGVTGWKSKCC 200 The following BLAST results are available for this feature:
BLAST of FC931414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931414 ID=FC931414; Name=FC931414; organism=Citrus clementina; type=EST; length=699bpback to top |