FC931414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB10_MOUSE (Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 39/109 (35.78%), Postives = 61/109 (55.96%), Query Frame = 2 Query: 8 ESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASI-KDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 +SF N+ +WL ID +A+++V ++L+GNKCD+ +VV + A E GI F ETSAK + +E+AF+ +A I + +P+ N + G KS CC Sbjct: 95 KSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENV---DISSGGGVTGWKSKCC 200
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB10_HUMAN (Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 39/109 (35.78%), Postives = 61/109 (55.96%), Query Frame = 2 Query: 8 ESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASI-KDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 +SF N+ +WL ID +A+++V ++L+GNKCD+ +VV + A E GI F ETSAK + +E+AF+ +A I + +P+ N + G KS CC Sbjct: 95 KSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENV---DISSGGGVTGWKSKCC 200
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB26_BOVIN (Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13 Identity = 36/87 (41.38%), Postives = 53/87 (60.92%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPS 262 ++ SF++++ WL EI +A D+V +L+GNK D + V E A+ A + G+PFMETSAK V+ AF A+A +K R PS Sbjct: 148 NKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKELKQRHTKAPS 234
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB10_CANFA (Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13 Identity = 39/109 (35.78%), Postives = 61/109 (55.96%), Query Frame = 2 Query: 8 ESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASI-KDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 +SF N+ +WL ID +A+++V ++L+GNKCD+ +VV + A E GI F ETSAK + +E+AF+ +A I + +P+ N + G KS CC Sbjct: 95 KSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTPVKEPNSENV---DISSGGGVTGWKSKCC 200
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 40/123 (32.52%), Postives = 69/123 (56.10%), Query Frame = 2 Query: 5 QESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASI-----KDRMASQPSMNNARPPTVQIK-------GQPVAQKSGCCST 337 +++F+++ +WL E+ +A N+ +L GNK DL + V E AK FA + G+ F+ETSA ++T +E AF+ + I K +A+ + +N+ P ++ K GQ + K CCS+ Sbjct: 100 RQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAADENQSNSNPASLTGKKILVPGPGQVIPGKKACCSS 222
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.949e-13 Identity = 43/123 (34.96%), Postives = 67/123 (54.47%), Query Frame = 2 Query: 5 QESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRM------ASQPSM--------NNARPPTVQIKGQPVAQKSGCC 331 +E+FN++ WL + ++A+ N+ +L+GNKCDLT + V+ E + FA E G+ F+ETSA+ + VE+AF+ A I ++ S S NA P TV+ A+ S CC Sbjct: 91 RETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYGIKVGYGGGNAGPQTVKPGEGGAAKSSSCC 213
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.949e-13 Identity = 38/118 (32.20%), Postives = 68/118 (57.63%), Query Frame = 2 Query: 5 QESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASI-----KDRMASQPSMNN--ARPPTVQIKGQPVAQKSGCCST 337 +++F+NV++WL E+ +A N+ ++ GNK DL + VS E +A A++ G+ F+ETSA ++ +E+AF + I K +A+Q + +N + T+ + Q+ CCST Sbjct: 97 RQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQEASSNLPGQGTTINVADASANQRRSCCST 214
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB5C_BOVIN (Ras-related protein Rab-5C OS=Bos taurus GN=RAB5C PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 37/109 (33.94%), Postives = 59/109 (54.13%), Query Frame = 2 Query: 8 ESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCCS 334 ++F K W+ E+ R AS N+ L GNK DL + + V ++ A+A+A++ + FMETSAK + V + FMA+A + + R V ++ A +S CCS Sbjct: 107 DTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRNRGVDLQENNPASRSQCCS 215
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 39/120 (32.50%), Postives = 67/120 (55.83%), Query Frame = 2 Query: 5 QESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASI-----KDRMASQPSMNNARPP----TVQIKGQPVAQKSGCCST 337 +++F+NV++WL E+ +A N+ ++ GNK DL + VS + A +++ G+ F+ETSA ++T +E+AF + I K +A+Q + A P T+ + K GCCST Sbjct: 97 RQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEATAGASVPGQGTTINVADTSGNTKKGCCST 216
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RABY_DICDI (Ras-related protein RabY OS=Dictyostelium discoideum GN=rabY PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 33/106 (31.13%), Postives = 61/106 (57.55%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQK 319 ++ SF+N+K W+ +I Y N ++V NK DL KV+ + AK++ D + IPF+ETS+K S+ VE F+ + ++ + ++P++ + Q + Q Q+ Sbjct: 97 NENSFSNLKHWIKDIKLYGRPNAINIVVSNKSDLVNEKVIDSDVAKSYCDSLEIPFIETSSKHSSNVEDCFVLLIKNVMKYLETEPTIPQQQQQQQQQQQQQQQQQ 202 The following BLAST results are available for this feature:
BLAST of FC931414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931414 ID=FC931414; Name=FC931414; organism=Citrus clementina; type=EST; length=699bpback to top |