FC931414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RB11A_RAT (Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 11 SFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNAR 277 ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA DST VE AF + I R+ SQ M++ R Sbjct: 98 TYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY-RIVSQKQMSDRR 185
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RB11A_RABIT (Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 11 SFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNAR 277 ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA DST VE AF + I R+ SQ M++ R Sbjct: 98 TYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY-RIVSQKQMSDRR 185
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RB11A_PONAB (Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 11 SFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNAR 277 ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA DST VE AF + I R+ SQ M++ R Sbjct: 98 TYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY-RIVSQKQMSDRR 185
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RB11A_PIG (Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 11 SFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNAR 277 ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA DST VE AF + I R+ SQ M++ R Sbjct: 98 TYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY-RIVSQKQMSDRR 185
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RB11A_MOUSE (Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 11 SFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNAR 277 ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA DST VE AF + I R+ SQ M++ R Sbjct: 98 TYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY-RIVSQKQMSDRR 185
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RB11A_HUMAN (Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 11 SFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNAR 277 ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA DST VE AF + I R+ SQ M++ R Sbjct: 98 TYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY-RIVSQKQMSDRR 185
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 11 SFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNAR 277 ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA DST VE AF + I R+ SQ M++ R Sbjct: 98 TYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY-RIVSQKQMSDRR 185
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 11 SFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNAR 277 ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA DST VE AF + I R+ SQ M++ R Sbjct: 98 TYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY-RIVSQKQMSDRR 185
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB5C_CHICK (Ras-related protein Rab-5C OS=Gallus gallus GN=RAB5C PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 36/109 (33.03%), Postives = 55/109 (50.46%), Query Frame = 2 Query: 8 ESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCCS 334 ++F K W+ E+ R AS N+ L GNK DL + V ++ A+ +AD+ + FMETSAK + V + FMA+A + R V ++ +S CCS Sbjct: 107 DTFVRAKNWVKELQRQASPNIVIALAGNKADLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAPGGPGRNRVVDLQESSQPSRSQCCS 215
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.441e-12 Identity = 40/124 (32.26%), Postives = 68/124 (54.84%), Query Frame = 2 Query: 5 QESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASI-----KDRMASQPSMNNARPPTVQIKGQPV----------AQKSGCC 331 +++F+++ +WL E+ +A N+ +L+GNKCDL + V E AK FA++ G+ F+ETSA ++T VE AF + I K +A+ S N + + GQ + A+++ CC Sbjct: 102 RQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAADESQGNGN--SASLSGQKIIIPGPAQEIPAKRNMCC 223 The following BLAST results are available for this feature:
BLAST of FC931414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931414 ID=FC931414; Name=FC931414; organism=Citrus clementina; type=EST; length=699bpback to top |