FC931414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12 Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 2 Query: 5 QESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASI 235 Q SF+NV +WL E+ +A N+ +LVGNK DL + VS E A+AFA E + F+ETSA D++ VE+AF + I Sbjct: 95 QSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEI 171
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12 Identity = 43/118 (36.44%), Postives = 62/118 (52.54%), Query Frame = 2 Query: 11 SFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPV---------AQKSGCCST 337 +F NV++WL E+ + N+ +LVGNK DL + VS E AKAFA+ FMETSA +S VE AF + I ++ + ++ P KGQ + +K GCCS+ Sbjct: 101 TFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIY-KVVCRKALEVGDDPAALPKGQTINVGKDDVSAVKKVGCCSS 217
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12 Identity = 42/117 (35.90%), Postives = 63/117 (53.85%), Query Frame = 2 Query: 11 SFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNN--------ARPPTVQIKGQ-PVAQKSGCCS 334 +F N +WL E+ + N+ +L+GNKCDL V E AKAFA+ + FMETSA D+T VE AF + I ++ S+ S++ + T+ +K V ++ GCCS Sbjct: 100 TFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQI-HKIVSKRSVDGGGESADLPGKGETINVKEDGSVLKRMGCCS 215
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 35/93 (37.63%), Postives = 56/93 (60.22%), Query Frame = 2 Query: 5 QESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPP 283 +ESF + +WL EI++YAS+ V +LVGNK DL + VS + A+ F++ + ++ETSAK+S VE+ F+ +A + +NN P Sbjct: 94 EESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSP 186
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 35/93 (37.63%), Postives = 56/93 (60.22%), Query Frame = 2 Query: 5 QESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPP 283 +ESF + +WL EI++YAS+ V +LVGNK DL + VS + A+ F++ + ++ETSAK+S VE+ F+ +A + +NN P Sbjct: 94 EESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSP 186
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 35/93 (37.63%), Postives = 56/93 (60.22%), Query Frame = 2 Query: 5 QESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPP 283 +ESF + +WL EI++YAS+ V +LVGNK DL + VS + A+ F++ + ++ETSAK+S VE+ F+ +A + +NN P Sbjct: 94 EESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSP 186
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB25_BOVIN (Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 2 Query: 8 ESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSG------CC 331 +++ V++WL E+ +A + +LVGNK DL+ ++ V E A+ FA+ G+ F+ETSA DST VE AF + I +++ Q NNAR V + P Q+ G CC Sbjct: 98 QTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ-RQNNARTNAVTLGSGPAGQELGPGEKRACC 210
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 2 Query: 11 SFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAF 214 +F NV +WL+E++ ++ V K+L+GNKCDL + + VS E K+ A+ G+ FMETSA DST V+ AF Sbjct: 99 TFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAF 166
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12 Identity = 33/87 (37.93%), Postives = 54/87 (62.07%), Query Frame = 2 Query: 5 QESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSM 265 ++SF ++ WL + +++S +V +L+GNK DL AN+ VS AK FA++ G+ F ETSAK + V++AF I ++ S P + Sbjct: 109 RDSFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQILKKLESNPGL 195
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11 Identity = 32/77 (41.56%), Postives = 52/77 (67.53%), Query Frame = 2 Query: 5 QESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASI 235 +E+FN++ WL + ++A+ N+ +L+GNKCDLT + V+ E + FA E G+ F+ETSA+ + VE+AF+ A I Sbjct: 91 RETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEI 167 The following BLAST results are available for this feature:
BLAST of FC931414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931414 ID=FC931414; Name=FC931414; organism=Citrus clementina; type=EST; length=699bpback to top |