FC931414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11 Identity = 38/110 (34.55%), Postives = 59/110 (53.64%), Query Frame = 2 Query: 8 ESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRM-ASQPSMNNARPPTVQIKGQPVAQKSGCCS 334 +SF N+ +WL ID +A+++V ++L+GNKCD+ +VV + A E I F ETSAK + +E+AF+ +A I + +P N + G K CCS Sbjct: 95 KSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQKTPVKEPDRENV---DISTTGGGTGLKK-CCS 200
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11 Identity = 37/89 (41.57%), Postives = 56/89 (62.92%), Query Frame = 2 Query: 11 SFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNAR 277 ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA D T VE AF + I R+ SQ M++ R Sbjct: 98 TYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIY-RIVSQKQMSDRR 185
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RABC_DICDI (Ras-related protein RabC OS=Dictyostelium discoideum GN=rabC PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11 Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIK-GQPVAQKSGCC 331 D +SF K W+ +I++Y D + +LVGNK D+ A + V++E + A+++ F+E SAK++ V Q F + I + +M N++ Q+ V QK GCC Sbjct: 92 DPKSFERCKNWVEDINQYTQDGMIIILVGNKSDMVAQRKVTFEQGQEMAEQLKTKFLEVSAKENNGVTQVFDLLVQDI------EATMKNSKVAQNQLNLNSEVGQKRGCC 196
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11 Identity = 40/126 (31.75%), Postives = 63/126 (50.00%), Query Frame = 2 Query: 5 QESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRM-----------------ASQPSMNNARPPTVQIKGQPVAQKSGCC 331 +E+FN++ WL + +++S N+ +L+GNK DL + + V E +AFA E G+ FMETSAK + VE+AF+ A I ++ Q + P Q + + SGCC Sbjct: 91 RETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 216
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11 Identity = 40/116 (34.48%), Postives = 59/116 (50.86%), Query Frame = 2 Query: 11 SFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPV--------AQKSGCCS 334 +F NV+ WL E+ + N+ +LVGNK DL V E AK+FA++ + FMETSA ++T VE AF + I ++ + + V KG + +K GCCS Sbjct: 100 TFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASESANVPSKGDKIDIGKDVSAVKKGGCCS 215
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11 Identity = 42/122 (34.43%), Postives = 65/122 (53.28%), Query Frame = 2 Query: 5 QESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASI-----------KDRMASQPSMNNARPPTVQIKGQPVA--QKSGCC 331 ++SF++V +WL E+ +A N+ +L+GNK DL +VV E AK FA+ + FMETSA +ST VE AFM + I + + S + + + + + GQ A K+ CC Sbjct: 103 RQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCC 224
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 41/118 (34.75%), Postives = 62/118 (52.54%), Query Frame = 2 Query: 11 SFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFM--------AMAASIKDRMASQPSMNNARPPTV--QIKGQPVAQKSGCCS 334 +F NV++WL E+ +A N+ +LVGNK DL + V E A+AF + G+ F+ETSA +ST VE+AF ++ + D ++P + R V +K GCCS Sbjct: 99 TFENVERWLKELRDHADSNIVIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNRPKIGEGRDVIVIDNAHDDGGKKKGGCCS 216
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 42/118 (35.59%), Postives = 64/118 (54.24%), Query Frame = 2 Query: 5 QESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQ---------IKGQPVAQKSGCC 331 Q ++ +V++W+ E+ A N+ +LVGNK DL + VS + AK F+++ + F+ETSA DS+ VE AF + I M S+PS + T+ +P A KSGCC Sbjct: 98 QATYKSVERWILELRENADRNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIM-SRPSHSTGPQTTIDSNTETIILPTTSEPPAAKSGCC 214
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 40/118 (33.90%), Postives = 58/118 (49.15%), Query Frame = 2 Query: 5 QESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIK----------GQPVAQKSGC 328 + ++N++ WL + + N +L+GNK DL A + V+YE AK FA+E G+ F+E SAK VE AF+ A I + NA VQ K +P Q+ GC Sbjct: 96 RSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGC 213
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB14_PONAB (Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 40/118 (33.90%), Postives = 58/118 (49.15%), Query Frame = 2 Query: 5 QESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIK----------GQPVAQKSGC 328 + ++N++ WL + + N +L+GNK DL A + V+YE AK FA+E G+ F+E SAK VE AF+ A I + NA VQ K +P Q+ GC Sbjct: 96 RSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGC 213 The following BLAST results are available for this feature:
BLAST of FC931414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931414 ID=FC931414; Name=FC931414; organism=Citrus clementina; type=EST; length=699bpback to top |