FC931414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21 Identity = 51/113 (45.13%), Postives = 73/113 (64.60%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQ---IKGQPVAQKSGCC 331 D++SF N++ W+ I+++A+D+VNK+L+GNKCD+ KVV K+ ADE GI F+ETSAK+S VE+AF+++A IK RM P N +P VQ G +K CC Sbjct: 99 DEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTP---NEQPQVVQPGTNLGANNNKKKACC 208
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.523e-20 Identity = 52/118 (44.07%), Postives = 73/118 (61.86%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANK-VVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIK-----GQPVAQKSGCCST 337 D+ SFNN++ W+ I+++ASDNVNK+LVGNK D+ +K V +A ADE GI F ETSAK + VE+ F ++A IK R+A + A+ P++ IK G A KS CC + Sbjct: 99 DESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEAQ-PSITIKPADQSGNQAAAKSACCGS 215
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20 Identity = 42/77 (54.55%), Postives = 63/77 (81.82%), Query Frame = 2 Query: 8 ESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIK 238 +SFN++K+WL ++DR+AS +V KL+VGNKCDL + + V ++ AK FADE+ IP METSAK+ST +++AF+ +A+ IK Sbjct: 119 DSFNSIKRWLIDVDRFASPSVLKLIVGNKCDLNSKRAVDFKIAKKFADELNIPIMETSAKESTAIDEAFIKLASDIK 195
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.684e-19 Identity = 53/121 (43.80%), Postives = 72/121 (59.50%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANK-VVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIK--------GQPVAQKSGCCST 337 D+ SFNN++ W+ I+++ASDNVNK+LVGNK D+ +K V +A ADE GI F ETSAK + VE+ F ++ IK R++ S A P T++I GQ QKS CC T Sbjct: 99 DESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDS--RAEPATIKISQTDQAAGAGQ-ATQKSACCGT 216
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: YPTV2_VOLCA (GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19 Identity = 53/120 (44.17%), Postives = 71/120 (59.17%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANK-VVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRM---------ASQPSMNNARPPTVQIKGQPVAQKSGCC 331 D+ SFNNV+ W+ I+++ASDNVNK+LVGNK DL +K VVS +A ADE G F ETSAKD+ VE+AF+A+A + RM Q ++ A+P + AQ CC Sbjct: 97 DEASFNNVRNWMRNIEQHASDNVNKILVGNKLDLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARMEGEHANQQLLQQQQLSAAQPVRLTSGSPSPAQGKSCC 216
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RABG2_DICDI (Ras-related protein RabG2 OS=Dictyostelium discoideum GN=rabG2 PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.576e-17 Identity = 47/92 (51.09%), Postives = 64/92 (69.57%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASI-KDRM-ASQPSMNN 271 DQ ++NNV+ W+ EI RYA V+++LVGNKCDL K+V+ A+ +AD +GIPFME SA VE+AFMAMA I ++ M S+PS+ N Sbjct: 90 DQLTYNNVRLWMQEIQRYAVLGVSRVLVGNKCDLEDRKLVNTSIAREYADSLGIPFMEASAATGVNVEEAFMAMANEIYRNHMGGSKPSVVN 181
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB37_MOUSE (Ras-related protein Rab-37 OS=Mus musculus GN=Rab37 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.576e-17 Identity = 48/113 (42.48%), Postives = 68/113 (60.18%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQK--SGCCS 334 +Q SF+N++ WL EI YA +V +L+GNK D+++ +V+ E + A E G+PFMETSAK VE AF+A+A +K R QP P+ QI+ +QK S CCS Sbjct: 114 NQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRAGRQPD-----EPSFQIRDYVESQKKRSSCCS 221
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RABA_DICDI (Ras-related protein RabA OS=Dictyostelium discoideum GN=rabA PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.058e-17 Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMAS-QPSMNNARPPTVQIKGQPVAQKSGC 328 DQ SF NV +W+ EI+RYA DNV K+++GNK D+ + KVV A+ FAD + I F ETSAK + +E AF+++ DR+ +PS ++ T+ +K +P +QKS C Sbjct: 92 DQRSFENVAKWIQEIERYARDNVIKMIIGNKSDMISQKVVDPFLAQEFADSLDITFKETSAKQAINIEDAFISLVKLCIDRIEEFKPSSTSS--STIILK-KPQSQKSNC 198
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17 Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 D++SFNN++ W + YA++ V +LVGNKCDL +VVS E +A AD+ GIPF+E S+K + VE+ F ++A I+D +A N + + I S CC Sbjct: 95 DEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKTKG-NESGSGGINIAEGEENSASKCC 203
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16 Identity = 36/79 (45.57%), Postives = 58/79 (73.42%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIK 238 D++SF+NV+ W + ++++AS+NV K+L+GNKCD + VS+E +A ADE+G+ F+E SAK + V++AF +A IK Sbjct: 93 DKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIK 171 The following BLAST results are available for this feature:
BLAST of FC931414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931414 ID=FC931414; Name=FC931414; organism=Citrus clementina; type=EST; length=699bpback to top |