FC931414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RABF1_DICDI (Ras-related protein RabF1 OS=Dictyostelium discoideum GN=rabF1-1 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.605e-15 Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPP 283 DQ SF NV W+ +I RYA++NV K+++GNK DL + KVV A+ FAD + IPF E SAK S +E+AF+++ +R+ + S+ + P Sbjct: 90 DQRSFENVPSWIEDIRRYANENVIKIIIGNKNDLVSQKVVDPFLAQEFADSLDIPFKEISAKQSINIEEAFISLVKLCINRI-EETSLKKTQSP 182
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB5A_BOVIN (Ras-related protein Rab-5A OS=Bos taurus GN=RAB5A PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.605e-15 Identity = 41/111 (36.94%), Postives = 60/111 (54.05%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCCS 334 ++ESF K W+ E+ R AS N+ L GNK DL + V ++ A+++AD+ + FMETSAK S V + FMA+A + P N+ R V + +S CCS Sbjct: 104 NEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSTRGRGVDLTEPTQPTRSQCCS 214
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.605e-15 Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPS 262 +++SF+N++ WL EI YA +V +L+GNK D T +VV E + A E G+PFMETSAK V+ AF A+A +K R PS Sbjct: 149 NKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQRSTKAPS 235
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RABZ_DICDI (Ras-related protein RabZ OS=Dictyostelium discoideum GN=rabZ PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.321e-15 Identity = 37/78 (47.44%), Postives = 55/78 (70.51%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASI 235 +Q++F+NV +WL E+ R A NV L++ NKCDL +VV++ AK FAD+ IP +E SAK+S VE+AF+ +A+ I Sbjct: 135 NQKTFDNVGRWLEEVHRLAGPNVPILIIANKCDLNEKRVVNFNNAKKFADDKNIPIIEVSAKESLGVEEAFIKLASEI 212
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB8A_MACFA (Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.321e-15 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQK 319 +++SF+N++ W+ I+ +AS +V K+++GNKCD+ + VS E + A + GI FMETSAK + VE AF +A IK +M + N+ + +K P QK Sbjct: 92 NEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKITPDQQK 197
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB8A_HUMAN (Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.321e-15 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQK 319 +++SF+N++ W+ I+ +AS +V K+++GNKCD+ + VS E + A + GI FMETSAK + VE AF +A IK +M + N+ + +K P QK Sbjct: 92 NEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKITPDQQK 197
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB8A_CANFA (Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.321e-15 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQK 319 +++SF+N++ W+ I+ +AS +V K+++GNKCD+ + VS E + A + GI FMETSAK + VE AF +A IK +M + N+ + +K P QK Sbjct: 92 NEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKITPDQQK 197
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 35/91 (38.46%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNA 274 +++SF+N+K W+ I+ +AS +V ++++GNKCD+ + VS E + A + GI F+ETSAK ST VE+AF +A I ++ + + +N+ Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNS 182
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 35/91 (38.46%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNA 274 +++SF+N+K W+ I+ +AS +V ++++GNKCD+ + VS E + A + GI F+ETSAK ST VE+AF +A I ++ + + +N+ Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNS 182
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB8B_MOUSE (Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 35/91 (38.46%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNA 274 +++SF+N+K W+ I+ +AS +V ++++GNKCD+ + VS E + A + GI F+ETSAK ST VE+AF +A I ++ + + +N+ Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNS 182 The following BLAST results are available for this feature:
BLAST of FC931414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931414 ID=FC931414; Name=FC931414; organism=Citrus clementina; type=EST; length=699bpback to top |