FC931420

Overview
NameFC931420
Unique NameFC931420
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34
Identity = 79/215 (36.74%), Postives = 122/215 (56.74%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVT-LNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPI 650
            F  +D+  AT G+    +LG GG   VY+G LP + I +A+KK        +++F+ E++ + ++ HRN+V+LLG C      LLVY+++  GSL  +L+    V+ L W  R  +   VA  + YLH      +IHRD+K  N+LLD  L  ++ DFG ++L     +  TT V GTLGYL PE+  T      +DV+SFG  L+E+  G++ +
Sbjct:   96 FTEEDMKEATNGYDVSRILGQGGQWTVYKGILPDNSI-VAIKKTRLGDNNQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITGGSLFDHLHGSMFVSSLTWEHRLEIAIEVAGAIAYLHSGASIPIIHRDIKTENILLDENLTAKVADFGASKLKPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKAL 309          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 4.128e-34
Identity = 76/217 (35.02%), Postives = 122/217 (56.22%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPK-VTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIER 656
            F  ++L  AT  F  K +LG G  G VY+G +   KI IAVK+        +++F+ EI+ + ++ HRN+V+L+G C      +LVY+Y+PNG + K L+++     + W  R  +   +A  L Y+H      + HRD+K +N+LLD +   ++ DFG +R         TT V GT GY+ PE+  + + T  +DV+SFG  L+E+  G +P+ R
Sbjct:  420 FSSEELKKATDNFSVKRVLGKGSQGTVYKGMMVDGKI-IAVKRSKVVDEDKLEKFINEIILLSQINHRNIVKLIGCCLETEVPILVYEYIPNGDMFKRLHDESDDYAMTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSR 635          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 4.128e-34
Identity = 79/217 (36.41%), Postives = 120/217 (55.30%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQ-PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIER 656
            F   +L  AT  F    +LG GG G VY+G L   +I +AVK+        ++EF+ E+V + ++ HRN+V+LLG C      +LVY+++PNG L K L ++     + W  R  +   +A  L YLH      + HRD+K +N+LLD +   ++ DFG +R         TT V GT GY+ PE+ ++ K T  +DV+SFG  L+E+  G+ P  R
Sbjct:  412 FSSNELEKATDNFNTNRVLGQGGQGTVYKGMLVDGRI-VAVKRSKAMDEDKVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNPSSR 627          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.128e-34
Identity = 88/224 (39.29%), Postives = 129/224 (57.59%), Query Frame = 3
Query:   48 REKELLGSGGFGRVYRGTLPKSKIEIAVKKI-----SHES-------------RQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQP-KVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGT---DPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIE 653
            + + ++G GG G VY+ +L +S   +AVK I     SHES             R    EF AE+ ++  ++H N+V+L      +   LLVY+YMPNGSL + L+ +  +  + WR R  +  G A GL YLH   ++ VIHRDVK+SN+LLD E   R+ DFGLA++    +   D     V GTLGY+APE++ T K    +DV+SFG  L+E+  G++P+E
Sbjct:  672 KSENIIGRGGQGNVYKVSL-RSGETLAVKHIWCPESSHESFRSSTAMLSDGNNRSNNGEFEAEVATLSNIKHINVVKLFCSITCEDSKLLVYEYMPNGSLWEQLHERRGEQEIGWRVRQALALGAAKGLEYLHHGLDRPVIHRDVKSSNILLDEEWRPRIADFGLAKIIQADSVQRDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLE 894          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.392e-34
Identity = 76/218 (34.86%), Postives = 132/218 (60.55%), Query Frame = 3
Query:   51 EKELLGSGGFGRVYRGTLPKSKIEIAVKKISHES-------------RQGMKE--FVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYD-HGTDPQTTHVV-GTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIE 653
            E  ++G+G  G+VY+  L   +  +AVK++   S             + G+++  F AE+ ++G++RH+N+V+L   C  +   LLVY+YMPNGSL   L++     L W+ R+ +I   A GL YLH +    ++HRD+K++N+L+DG+   R+ DFG+A+  D  G  P++  V+ G+ GY+APE++ T +    +D++SFG  +LE+   +RP++
Sbjct:  678 EDNVIGAGASGKVYKVVLTNGET-VAVKRLWTGSVKETGDCDPEKGYKPGVQDEAFEAEVETLGKIRHKNIVKLWCCCSTRDCKLLVYEYMPNGSLGDLLHSSKGGMLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAKAVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVD 894          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.042e-34
Identity = 75/216 (34.72%), Postives = 125/216 (57.87%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPK--VTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPI 650
            F  ++L  AT+ F E  +LG GG G VY+G L   +  +AVKK        ++EF+ E+V + ++ HR++V+LLG C      +LVY+++ NG+L K+++ +     T+ W  R  +   +A  L YLH      + HRD+K++N+LLD +   ++ DFG +R         TT + GT+GY+ PE+ ++ + T  +DV+SFG  L E+  G +P+
Sbjct:  441 FNSRELEKATENFSENRVLGHGGQGTVYKGMLVDGRT-VAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITGDKPV 655          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 7.042e-34
Identity = 79/217 (36.41%), Postives = 120/217 (55.30%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQ-PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIER 656
            F  ++L  AT  F    +LG GG G VY+  L    I +AVK+        M+EF+ EIV + ++ HRN+V+LLG C      +LVY+Y+PNG L K L+++     + W  R  +   +A  L Y+H      + HRD+K +N+LLD +   ++ DFG +R         TT V GT GY+ PE+  + + T  +DV+SFG  L+E+  G +P+ R
Sbjct:  416 FSSRELEKATDNFSIDRVLGQGGQGTVYKRMLVDGSI-VAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDEYDDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPMSR 631          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.042e-34
Identity = 86/223 (38.57%), Postives = 121/223 (54.26%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKK-----ISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQS 662
            FR  +L  AT GF+E   LG G FG VY+  L    I +AVK+     I H + +G   F +E+  + ++RH N+V LLGYC   GE LLVY+YMP+G+L  +L+      L+W  R  ++   A GL YLH E +  +IHRDVK SN+LLDGE+  R+ DFGL                     ++     +  +    DV+ FG  LLE+  GR+ I+R+S
Sbjct:  507 FRLSELKDATHGFKEFNELGRGSFGFVYKAVLSDG-IHVAVKRANAATIIHSNNRG---FESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHLHGDLS-QLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILLDGEMCARIADFGL---------------------VSSNERDSSNSDREGDVYDFGIVLLEILSGRKAIDRES 703          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: CCR12_ARATH (Serine/threonine-protein kinase-like protein At1g28390 OS=Arabidopsis thaliana GN=At1g28390 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.197e-34
Identity = 90/227 (39.65%), Postives = 128/227 (56.39%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQG-----MKEFVAEIVSIGRLRHRNLVQLLGYC---RRKGELLLVYDYMPNGSLDKYLYNQPKVTL---NWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDP-QTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIE 653
            F Y +L +AT GF     LG G  GRVY+  L   K+  AVK+ +  +  G     + +   EI  + R+RHR +V L+GYC   RRK +LL+V +YMPNG+L   L+++  +     +W +R      +A+ +  LH   E  VIHRD+K+ NVL+DG+ N RL DFGLA + +   +  + T   GTLGYL P +      T  +DVFSFG  LLE+  GR  I+
Sbjct:   40 FNYDELAVATNGFSANNFLGKGSHGRVYKAVLDDGKLLAAVKRTTITTTVGNNNNNVSQVDNEIEILSRVRHRWMVNLIGYCVDHRRKTKLLVV-EYMPNGTLHDQLHSRSSLDSRLSSWNRRIKHALQIAIAVHALHTA-ETQVIHRDIKSCNVLIDGDGNARLADFGLALIGNVDDERLKYTPPAGTLGYLDPSYLAPADLTAKSDVFSFGILLLEIISGREAID 264          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.201e-33
Identity = 75/215 (34.88%), Postives = 123/215 (57.21%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPK-VTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPI 650
            F  ++L  AT  F E  +LG GG G VY+G L   +  +AVKK        ++EF+ E+V + ++ HR++V+LLG C       LVY+++PNG+L ++++ +    T  W  R  +   +A  L YLH      + HRD+K++N+LLD +   ++ DFG +R         TT + GT+GY+ PE+  + + T  +DV+SFG  L+E+  G +P+
Sbjct:  439 FSSRELEKATDNFSESRILGQGGQGTVYKGMLVDGRT-VAVKKSKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHEESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHWTTVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVLVELITGEKPV 652          
The following BLAST results are available for this feature:
BLAST of FC931420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
WAKLS_ARATH3.161e-3436.74Putative wall-associated receptor kinase-like 16 O... [more]
WAKLE_ARATH4.128e-3435.02Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
WAKLD_ARATH4.128e-3436.41Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
IKU2_ARATH4.128e-3439.29Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
HSL1_ARATH5.392e-3434.86Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
WAKLN_ARATH7.042e-3434.72Wall-associated receptor kinase-like 18 OS=Arabido... [more]
WAKLC_ARATH7.042e-3436.41Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
ACCR2_ARATH7.042e-3438.57Serine/threonine-protein kinase-like protein CCR2 ... [more]
CCR12_ARATH9.197e-3439.65Serine/threonine-protein kinase-like protein At1g2... [more]
WAKLK_ARATH1.201e-3334.88Putative wall-associated receptor kinase-like 11 O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34104H09EF PostHarvP1 Citrus clementina cDNA clone C34104H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931420 ID=FC931420; Name=FC931420; organism=Citrus clementina; type=EST; length=700bp
CTCACAGGTTCAGGTACAAAGATCTTTACATTGCCACTAAAGGGTTCAGA
GAGAAAGAACTGCTAGGCAGCGGCGGATTTGGGAGAGTGTATAGGGGTAC
ACTGCCCAAATCCAAAATTGAGATTGCAGTGAAGAAGATTTCTCACGAAT
CCAGACAGGGGATGAAGGAATTCGTTGCGGAGATTGTGAGCATCGGTCGC
CTCAGGCACCGGAATTTAGTGCAACTCTTGGGATATTGCCGGCGTAAAGG
GGAGCTGCTTTTGGTCTATGATTACATGCCTAATGGAAGCTTAGACAAAT
ACCTCTATAACCAACCAAAAGTCACACTAAACTGGAGACAAAGATATGGA
GTCATCAAAGGTGTCGCATTAGGCCTGTTATATTTGCACGAAGAATGGGA
ACAAGTTGTGATTCACAGAGATGTTAAGGCAAGTAACGTGTTGCTTGATG
GTGAATTAAACGGAAGATTGGGAGATTTCGGCCTGGCAAGATTATACGAC
CACGGAACAGATCCACAAACAACGCACGTTGTGGGAACACTTGGGTACCT
TGCCCCTGAGCACAGTCGGACAGGCAAGGCCACCACAAGCGCTGATGTGT
TTTCATTTGGGGCATTTTTGCTTGAAGTTGCTTGCGGGAGAAGGCCAATT
GAGAGACAGAGCCAGAAGAGAATTTATTTTGGTTGATTGCGTGNTTGACT
back to top