FC931420

Overview
NameFC931420
Unique NameFC931420
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: ABL2_HUMAN (Tyrosine-protein kinase ABL2 OS=Homo sapiens GN=ABL2 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.022e-16
Identity = 63/203 (31.03%), Postives = 98/203 (48.28%), Query Frame = 3
Query:   54 KELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYL--YNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVV--------IHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVA 632
            K  LG G +G VY G   K  + +AVK +  ++ + ++EF+ E   +  ++H NLVQLLG C  +    +V +YMP G+L  YL   N+ +VT             A+ LLY+  +    +        IHRD+ A N L+      ++ DFGL+RL    T          + + APE       +  +DV++FG  L E+A
Sbjct:  291 KHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVT-------------AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIA 479          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: STK_HYDAT (Tyrosine-protein kinase STK OS=Hydra attenuata GN=STK PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16
Identity = 67/209 (32.06%), Postives = 100/209 (47.85%), Query Frame = 3
Query:   30 IATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTH--VVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVAC-GRRP 647
            I  +  R    LG+G FG V+ G    +  ++AVK +          F+ E   + +LRH++LVQL   C  +  + +V +YM  GSL  YL     V L       +   VA G+ +L     Q  IHRD+ A N+L+      ++ DFGLARL +   D  T H      + + APE +   + T  +DV+SFG  + E+   GR P
Sbjct:  235 IPRESLRLNRKLGAGQFGEVWAGVW-NNTTQVAVKTLK-PGTMSPASFLDEAGVMKKLRHKHLVQLYAICSDREPIYIVTEYMSGGSLLDYLSKGEGVNLQLPTLIDMAAQVASGMAFLE---AQGYIHRDLAARNILVGENYICKVADFGLARLIE--DDEYTAHEGAKFPIKWTAPEAALYNRFTIKSDVWSFGILMAEIVTKGRIP 436          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: RIPK2_BOVIN (Receptor-interacting serine/threonine-protein kinase 2 OS=Bos taurus GN=RIPK2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16
Identity = 56/208 (26.92%), Postives = 103/208 (49.52%), Query Frame = 3
Query:   63 LGSGGFGRVYRGTLPKSKIEIAVKKISHESR---QGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVT-LNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR----LYDHGTDPQTTHVVGTLGYLAPEHSRTG---KATTSADVFSFGAFLLEVACGRRPIE 653
            L  G  G V        ++++AVK +   S        + + E   + + R   ++ +LG C     L +V +YMPNGSL++ L+ + +   + W  R+ ++  +ALG+ YLH      ++H D+K  N+LLD E + ++ DFGL++            ++    GT+ Y+ PE+   G   +A+   D++S+   + EV   ++P E
Sbjct:   24 LSRGASGTVSSARHADWRVQVAVKHLHIHSPLLDSERNDVLREAEILHKARFSYILPILGICNEPEFLGIVTEYMPNGSLNELLHRKIEYPDVPWPLRFRILHEIALGVNYLHN-MNPPLLHHDLKTQNILLDNEFHVKIADFGLSKWRMMSLSQSRSSKSAPEGGTIVYMPPENYEPGQKARASVKHDIYSYAIIIWEVLSRKQPFE 230          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: IKKB_BOVIN (Inhibitor of nuclear factor kappa-B kinase subunit beta OS=Bos taurus GN=IKBKB PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16
Identity = 75/210 (35.71%), Postives = 102/210 (48.57%), Query Frame = 3
Query:   54 KELLGSGGFGRVYRGTLPKSKIEIAVKKISHE-SRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGEL------LLVYDYMPNGSLDKYLYNQPKVTLNWRQR--YGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLD-GE--LNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRP 647
            KE LG+GGFG V R    ++  +IA+K+   E S +  + +  EI  + RL H N+V           L      LL  +Y   G L KYL NQ +     R+     ++  +A  L YLHE     +IHRD+K  N++L  GE  L  ++ D G A+  D G+    T  VGTL YLAPE     K T + D +SFG    E   G RP
Sbjct:   18 KERLGTGGFGNVIRWHNQETGEQIAIKQCRQELSPRNRERWCLEIQIMRRLNHPNVVAARDVPEGMQSLAPNDLPLLAMEYCQGGDLRKYL-NQFENCCGLREGAILTLLSDIASALRYLHENR---IIHRDLKPENIVLQQGEQRLIHKIIDLGYAKELDQGS--LCTSFVGTLQYLAPELLEQQKYTVTVDYWSFGTLAFECITGFRP 221          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: FER_CANFA (Proto-oncogene tyrosine-protein kinase Fer OS=Canis familiaris GN=FER PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16
Identity = 59/191 (30.89%), Postives = 97/191 (50.79%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMK-EFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLE 626
            ELLG G FG VY+G L K K  +AVK    +  Q +K +F+ E   + +  H N+V+L+G C ++  + ++ + +P G    +L  + K  +  +Q        A G+ YL     +  IHRD+ A N L+      ++ DFG++R  D G    +      + + APE    G+ ++ +DV+SFG  L E
Sbjct:  567 ELLGKGNFGEVYKGIL-KDKTAVAVKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPIYIIMELVPGGDFLSFL-RKKKDEIKLKQLVKFSLDAASGMSYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWE 752          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: TIE1_HUMAN (Tyrosine-protein kinase receptor Tie-1 OS=Homo sapiens GN=TIE1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16
Identity = 65/212 (30.66%), Postives = 103/212 (48.58%), Query Frame = 3
Query:   54 KELLGSGGFGRVYRGTLPKS--KIEIAVKKIS-HESRQGMKEFVAEIVSIGRLRHR-NLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKV--------------TLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTL--GYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            ++L+G G FG+V R  + K   K+  A+K +  + S    ++F  E+  + +L H  N++ LLG C+ +G L +  +Y P G+L  +L     +              TL+ RQ        A G+ YL    E+  IHRD+ A NVL+   L  ++ DFGL+R    G +      +G L   ++A E       TT +DV+SFG  L E+
Sbjct:  842 EDLIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEYASENDHRDFAGELEVLCKLGHHPNIINLLGACKNRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAREHGTASTLSSRQLLRFASDAANGMQYLS---EKQFIHRDLAARNVLVGENLASKIADFGLSR----GEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEI 1046          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: STE20_YARLI (Serine/threonine-protein kinase STE20 OS=Yarrowia lipolytica GN=STE20 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16
Identity = 64/216 (29.63%), Postives = 105/216 (48.61%), Query Frame = 3
Query:   36 TKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSL-DKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQSQKRIYF 680
            TK +R    +G G  G V+      S + +A+K+++ E +   +  + EI+ +   +H+N+V  +      G+L +V +YM  GSL D   YN     +   Q   V +   LGL +LH +    VIHRD+K+ NVLL      +L DFG     +     +TT +VGT  ++APE     +  +  D++S G   +E+  G  P   +S  R  +
Sbjct:  841 TKLYRNLVKIGQGASGGVFTAYEVGSNLSVAIKQMNLEHQPKKELIINEILVMKDSKHKNIVNFIDSYLHGGDLWVVMEYMEGGSLTDVVTYNM----MTESQIGAVCRETLLGLQHLHSKG---VIHRDIKSDNVLLSMRGEIKLTDFGFCAQINESNLKRTT-MVGTPYWMAPEVVSRKEYGSKVDIWSLGIMSIEMIEGEPPYLNESPLRALY 1048          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: STE20_USTMA (Serine/threonine-protein kinase SMU1 OS=Ustilago maydis GN=SMU1 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16
Identity = 65/218 (29.82%), Postives = 105/218 (48.17%), Query Frame = 3
Query:   36 TKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWR---QRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQSQKRIYF 680
            TK +R  + +G G  G V+      + + +A+K+++ E +      + EI+ +   RHRN+V  +     KG+L +V +YM  GSL         VT N     Q   V + V  GL +LH+     VIHRD+K+ NVLL  + + +L DFG           +TT +VGT  ++APE     +     D++S G   +E+  G  P   ++  R  +
Sbjct:  469 TKLYRSLQKIGQGASGGVFTAYQVGTNVSVAIKQMNLEQQPKKDLIINEILVMKESRHRNIVNFIDSFLFKGDLWVVMEYMEGGSLTDV------VTCNIMTEGQIAAVSREVLEGLRHLHQHG---VIHRDIKSDNVLLSLQGDIKLTDFGFCAQIGESQAKRTT-MVGTPYWMAPEVVTRKEYGPKVDIWSLGIMCIEMVEGEPPYLNENPLRALY 676          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: ROR1_DROME (Tyrosine-protein kinase transmembrane receptor Ror OS=Drosophila melanogaster GN=Ror PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16
Identity = 63/199 (31.66%), Postives = 105/199 (52.76%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTL---PKSKIEIAVKKISHE-SRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLY-NQPK--VTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E LG G FG+VY+G L    K+ I +A+K +    S +  ++F  EI  I  L+H+N+V +LG    K    ++++YM NG L ++L  N P    +L+  +   +   ++ G+ YL        +HRD+ A N L++  L  ++ DFGL+R +Y        +  +  + ++  E    GK TT +DV+SFG  L E+
Sbjct:  414 EELGEGAFGKVYKGQLLQPNKTTITVAIKALKENASVKTQQDFKREIELISDLKHQNIVCILGVVLNKEPYCMLFEYMANGDLHEFLISNSPTEGKSLSQLEFLQIALQISEGMQYLSAHH---YVHRDLAARNCLVNEGLVVKISDFGLSRDIYSSDYYRVQSKSLLPVRWMPSESILYGKFTTESDVWSFGVVLWEI 609          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: ROCO5_DICDI (Probable serine/threonine-protein kinase roco5 OS=Dictyostelium discoideum GN=roco5 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16
Identity = 68/226 (30.09%), Postives = 112/226 (49.56%), Query Frame = 3
Query:   15 YKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQG------MKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNG----RLGDFGLARLYDH---GTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIE 653
            YKDL I  K       +G GGFG VY+G L    +  A+K+I+ +S Q        +EF  E+     L H ++V L GYC       +V +Y+PNG+L  +L  +   ++ W+ +  +   +A  + ++H  +   + HRD+K+ N+L+  ++N     ++ DFG  R       G D  +  +     +L+PE  R  + T  ADV+SFG  L E+  G  P +
Sbjct: 2172 YKDLEIIEK-------VGEGGFGIVYKGKLRGQLV--AIKQITIDSGQAEAASEIYREFRREVWLSNTLTHPSIVSLKGYCL--DPCCIVMEYIPNGTLYSHL-RKSFSSITWQLKLKIAINIADAIKHMHG-FTPKICHRDLKSPNILMLSDMNAAVVCKVSDFGETRAVVTSALGRDKLSNPI-----WLSPEIMRGDEYTEKADVYSFGIVLWEILTGLLPFD 2379          
The following BLAST results are available for this feature:
BLAST of FC931420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ABL2_HUMAN1.022e-1631.03Tyrosine-protein kinase ABL2 OS=Homo sapiens GN=AB... [more]
STK_HYDAT1.334e-1632.06Tyrosine-protein kinase STK OS=Hydra attenuata GN=... [more]
RIPK2_BOVIN1.334e-1626.92Receptor-interacting serine/threonine-protein kina... [more]
IKKB_BOVIN1.334e-1635.71Inhibitor of nuclear factor kappa-B kinase subunit... [more]
FER_CANFA1.334e-1630.89Proto-oncogene tyrosine-protein kinase Fer OS=Cani... [more]
TIE1_HUMAN1.742e-1630.66Tyrosine-protein kinase receptor Tie-1 OS=Homo sap... [more]
STE20_YARLI1.742e-1629.63Serine/threonine-protein kinase STE20 OS=Yarrowia ... [more]
STE20_USTMA1.742e-1629.82Serine/threonine-protein kinase SMU1 OS=Ustilago m... [more]
ROR1_DROME1.742e-1631.66Tyrosine-protein kinase transmembrane receptor Ror... [more]
ROCO5_DICDI1.742e-1630.09Probable serine/threonine-protein kinase roco5 OS=... [more]

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Properties
Property NameValue
Genbank descriptionC34104H09EF PostHarvP1 Citrus clementina cDNA clone C34104H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931420 ID=FC931420; Name=FC931420; organism=Citrus clementina; type=EST; length=700bp
CTCACAGGTTCAGGTACAAAGATCTTTACATTGCCACTAAAGGGTTCAGA
GAGAAAGAACTGCTAGGCAGCGGCGGATTTGGGAGAGTGTATAGGGGTAC
ACTGCCCAAATCCAAAATTGAGATTGCAGTGAAGAAGATTTCTCACGAAT
CCAGACAGGGGATGAAGGAATTCGTTGCGGAGATTGTGAGCATCGGTCGC
CTCAGGCACCGGAATTTAGTGCAACTCTTGGGATATTGCCGGCGTAAAGG
GGAGCTGCTTTTGGTCTATGATTACATGCCTAATGGAAGCTTAGACAAAT
ACCTCTATAACCAACCAAAAGTCACACTAAACTGGAGACAAAGATATGGA
GTCATCAAAGGTGTCGCATTAGGCCTGTTATATTTGCACGAAGAATGGGA
ACAAGTTGTGATTCACAGAGATGTTAAGGCAAGTAACGTGTTGCTTGATG
GTGAATTAAACGGAAGATTGGGAGATTTCGGCCTGGCAAGATTATACGAC
CACGGAACAGATCCACAAACAACGCACGTTGTGGGAACACTTGGGTACCT
TGCCCCTGAGCACAGTCGGACAGGCAAGGCCACCACAAGCGCTGATGTGT
TTTCATTTGGGGCATTTTTGCTTGAAGTTGCTTGCGGGAGAAGGCCAATT
GAGAGACAGAGCCAGAAGAGAATTTATTTTGGTTGATTGCGTGNTTGACT
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