FC931420

Overview
NameFC931420
Unique NameFC931420
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.947e-41
Identity = 94/227 (41.41%), Postives = 136/227 (59.91%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRG---------TLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKV--TLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHG-TDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIE 653
            F + +L +AT+ FR   ++G GGFG V++G         T P + + IAVKK++ E  QG +E++ EI  +G+L H NLV+L+GYC      LLVY++M  GSL+ +L+ +      L W  R  V    A GL +LH +    VI+RD+KASN+LLD + N +L DFGLAR    G     +T V+GT GY APE+  +G     +DV+SFG  LLE+  G+R ++
Sbjct:   55 FTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSD-PVKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALD 280          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.767e-41
Identity = 92/223 (41.26%), Postives = 133/223 (59.64%), Query Frame = 3
Query:    6 RFRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLY-NQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLY-DHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQSQK 668
            RF Y  + I T  F+   +LG GGFG VY G +  ++ ++AVK +SH S QG K+F AE+  + R+ H+NLV L+GYC     L L+Y+YM NG L +++   + +  LNW  R  ++   A GL YLH   +  ++HRDVK +N+LL+     +L DFGL+R +   G    +T V GT GYL PE+ RT   T  +DV+SFG  LLE+   R  I++  +K
Sbjct:  567 RFSYSQVVIMTNNFQR--ILGKGGFGMVYHGFVNGTE-QVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFILNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQSREK 786          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.014e-40
Identity = 92/223 (41.26%), Postives = 134/223 (60.09%), Query Frame = 3
Query:    6 RFRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVT-LNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYD-HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQSQK 668
            RF Y ++   T  F  + +LG GGFG VY GT+  ++ ++AVK +SH S QG KEF AE+  + R+ H+NLV L+GYC     L L+Y+YM NG L +++  +   + LNW  R  ++   A GL YLH   +  ++HRDVK +N+LL+  L+ +L DFGL+R +   G    +T V GT GYL PE+ RT      +DV+SFG  LLE+   +  I +  +K
Sbjct:  581 RFTYSEVVTMTNNF--ERVLGKGGFGMVYHGTVNNTE-QVAVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRGGSILNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQSREK 800          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.325e-40
Identity = 90/224 (40.18%), Postives = 139/224 (62.05%), Query Frame = 3
Query:    6 RFRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVT-LNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYD-HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQSQKR 671
            +F Y ++   T  F++  +LG GGFG VY G++  ++ ++AVK +SH S QG K+F AE+  + R+ H+NLV L+GYC    +L L+Y+YM NG LD+++  +   + LNW  R  +    A GL YLH   + +++HRDVK +N+LL+   + +L DFGL+R +   G    +T V GT+GYL PE+ RT   T  +DV+SFG  LL +   +  I++  +KR
Sbjct:  566 KFTYAEVLTMTNNFQK--ILGKGGFGIVYYGSVNGTE-QVAVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGGSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVIDQNREKR 786          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.260e-40
Identity = 89/220 (40.45%), Postives = 130/220 (59.09%), Query Frame = 3
Query:    6 RFRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHE--SRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLN--WRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIE 653
            ++    L +AT  F ++ ++G G  GRVYR   P  KI +A+KKI +   S Q    F+  + ++ RLRH N+V L GYC   G+ LLVY+Y+ NG+LD  L+     ++N  W  R  V  G A  L YLHE     ++HR+ K++N+LLD ELN  L D GLA L  +     +T VVG+ GY APE + +G  T  +DV++FG  +LE+  GR+P++
Sbjct:  382 QYTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKI-MAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPNTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLD 600          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.260e-40
Identity = 93/221 (42.08%), Postives = 131/221 (59.28%), Query Frame = 3
Query:    6 RFRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQ-PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYD-HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQS 662
            RF Y ++   TK F+   +LG GGFG VY GT+  S+ ++AVK +S  S QG KEF AE+  + R+ H NLV L+GYC     L LVY+++PNG L ++L  +     +NW  R  +    ALGL YLH      ++HRDVK +N+LLD     +L DFGL+R +   G   ++T + GTLGYL PE   +G+    +DV+SFG  LLE+   +  I + S
Sbjct:  553 RFTYSEVVQVTKNFQR--VLGKGGFGMVYHGTVKGSE-QVAVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMITNQPVINQTS 770          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.855e-40
Identity = 93/211 (44.08%), Postives = 125/211 (59.24%), Query Frame = 3
Query:   27 YIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQP--KVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLY-DHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPI 650
            YI     + K L+G GGFG VYRGTL   + E+AVK  S  S QG +EF  E+  +  ++H NLV LLGYC    + +LVY +M NGSL   LY +P  +  L+W  R  +  G A GL YLH    + VIHRDVK+SN+LLD  +  ++ DFG ++     G    +  V GT GYL PE+ +T + +  +DVFSFG  LLE+  GR P+
Sbjct:  589 YIELATEKYKTLIGEGGFGSVYRGTLDDGQ-EVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPL 798          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.855e-40
Identity = 90/226 (39.82%), Postives = 136/226 (60.18%), Query Frame = 3
Query:   12 RYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKIS-HESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGE--LLLVYDYMPNGSL------DKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQT---THVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIE 653
            R++D+  AT    E+ ++GSGG G+VY+  L   +  +AVKKI   +     K F  E+ ++GR+RHR+LV+L+GYC  K E   LL+Y+YM NGS+      DK +  + K  L+W  R  +  G+A G+ YLH +    ++HRD+K+SNVLLD  +   LGDFGLA++     D  T   T    + GY+APE++ + KAT  +DV+S G  L+E+  G+ P +
Sbjct:  940 RWEDIMEATHNLSEEFMIGSGGSGKVYKAELENGET-VAVKKILWKDDLMSNKSFSREVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTD 1164          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.035e-40
Identity = 90/227 (39.65%), Postives = 139/227 (61.23%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQ-PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQ-TTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQSQKRIYFG 683
            + Y+++ + T  F     LG GGFG VY G +  ++ ++AVK +S  S QG K+F AE+  + R+ H NLV L+GYC     L+L+Y+YM NG+L ++L  +  +  L+W  R  +    A GL YLH   +  +IHRD+K+ N+LLD     +LGDFGL+R +  G++   +T+V G+ GYL PE+ RT   T  +DVFSFG  LLE+    +P+  Q++++ + G
Sbjct:  581 YTYEEVAVITNNFERP--LGEGGFGVVYHGNVNDNE-QVAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITS-QPVIDQTREKSHIG 803          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 5.035e-40
Identity = 90/214 (42.06%), Postives = 132/214 (61.68%), Query Frame = 3
Query:   36 TKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYN-------QPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLA-RLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIE 653
            T  F  K L+G G +GRVY G L KS    A+KK+   S+Q  +EF+A++  + RL+  N+V+LLGYC   G  +L Y+Y PNGSL   L+        QP   L+W QR  +  G A GL YLHE+ +  +IHRD+K+SN+LL  +   ++ DF L+ +  D      +T V+GT GY APE++ TG+ ++ +DV+SFG  LLE+  GR+P++
Sbjct:   65 TDNFGSKALIGEGSYGRVYHGVL-KSGRAAAIKKLD-SSKQPDREFLAQVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVD 276          
The following BLAST results are available for this feature:
BLAST of FC931420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BIK1_ARATH5.947e-4141.41Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y5182_ARATH7.767e-4141.26Probable LRR receptor-like serine/threonine-protei... [more]
RLK6_ARATH1.014e-4041.26Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
Y5181_ARATH1.325e-4040.18Probable LRR receptor-like serine/threonine-protei... [more]
SRF8_ARATH2.260e-4040.45Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
RLK7_ARATH2.260e-4042.08Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
NORK_PEA3.855e-4044.08Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
GSO1_ARATH3.855e-4039.82LRR receptor-like serine/threonine-protein kinase ... [more]
Y4245_ARATH5.035e-4039.65Probable LRR receptor-like serine/threonine-protei... [more]
PTI1_SOLLC5.035e-4042.06Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]

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Properties
Property NameValue
Genbank descriptionC34104H09EF PostHarvP1 Citrus clementina cDNA clone C34104H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931420 ID=FC931420; Name=FC931420; organism=Citrus clementina; type=EST; length=700bp
CTCACAGGTTCAGGTACAAAGATCTTTACATTGCCACTAAAGGGTTCAGA
GAGAAAGAACTGCTAGGCAGCGGCGGATTTGGGAGAGTGTATAGGGGTAC
ACTGCCCAAATCCAAAATTGAGATTGCAGTGAAGAAGATTTCTCACGAAT
CCAGACAGGGGATGAAGGAATTCGTTGCGGAGATTGTGAGCATCGGTCGC
CTCAGGCACCGGAATTTAGTGCAACTCTTGGGATATTGCCGGCGTAAAGG
GGAGCTGCTTTTGGTCTATGATTACATGCCTAATGGAAGCTTAGACAAAT
ACCTCTATAACCAACCAAAAGTCACACTAAACTGGAGACAAAGATATGGA
GTCATCAAAGGTGTCGCATTAGGCCTGTTATATTTGCACGAAGAATGGGA
ACAAGTTGTGATTCACAGAGATGTTAAGGCAAGTAACGTGTTGCTTGATG
GTGAATTAAACGGAAGATTGGGAGATTTCGGCCTGGCAAGATTATACGAC
CACGGAACAGATCCACAAACAACGCACGTTGTGGGAACACTTGGGTACCT
TGCCCCTGAGCACAGTCGGACAGGCAAGGCCACCACAAGCGCTGATGTGT
TTTCATTTGGGGCATTTTTGCTTGAAGTTGCTTGCGGGAGAAGGCCAATT
GAGAGACAGAGCCAGAAGAGAATTTATTTTGGTTGATTGCGTGNTTGACT
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