FC931420

Overview
NameFC931420
Unique NameFC931420
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.523e-36
Identity = 84/224 (37.50%), Postives = 127/224 (56.70%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQSQKRIY 677
            F + D+   T  F +  +LG GGFG VY G      +++AVK +S  S QG KEF +E+  + R+ H NL  L+GY     ++ L+Y++M NG++  +L  + + TL+WRQR  +    A GL YLH   +  ++HRDVK SN+LL+ +   +L DFGL+R  +       +T V GT GYL P    T      +D++SFG  LLE+  G+  I+    KR++
Sbjct:  560 FTFADVIKMTNNFGQ--VLGKGGFGTVYHGFY--DNLQVAVKLLSETSAQGFKEFRSEVEVLVRVHHVNLTALIGYFHEGDQMGLIYEFMANGNMADHLAGKYQHTLSWRQRLQIALDAAQGLEYLHCGCKPPIVHRDVKTSNILLNEKNRAKLADFGLSRSFHTESRSHVSTLVAGTPGYLDPLCFETNGLNEKSDIYSFGVVLLEMITGKTVIKESQTKRVH 779          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.523e-36
Identity = 81/220 (36.82%), Postives = 125/220 (56.82%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPK---VTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQ 659
            F  K+L  AT  F    +LG GG G VY+G L + +I +AVK+        M+EF+ E+V + ++ HRN+V+LLG C      +LVY+Y+PNG L K L+ + +    T+ W  R  +   +A  L Y+H      + HRD+K +N+LLD +   ++ DFG +R         TT V GT GY+ PE+  + + T  +DV+SFG  L+E+  G +P+ R+
Sbjct:  420 FSSKELKKATDNFSMNRVLGQGGQGTVYKGMLAEGRI-VAVKRSKVVGEGKMEEFINEVVLLSQINHRNIVKLLGCCLGTEVPVLVYEYIPNGDLFKRLHEKSESNDYTMTWEVRLRIAIEIAGALSYMHSAASIPIYHRDIKTTNILLDEKYRAKVSDFGTSRSITIAQTHLTTLVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRK 638          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.523e-36
Identity = 82/217 (37.79%), Postives = 122/217 (56.22%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPK-VTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIER 656
            F  K+L  AT  F    +LG GG G VY+G L    I +AVK+        M+EF+ EIV + ++ HRN+V+LLG C      +LVY+Y+PNG L K L+++    T+ W  R  +   +A  L Y+H      + HRD+K +N+LLD +   ++ DFG +R         TT V GT GY+ PE+  + + T  +DV+SFG  L+E+  G +P+ R
Sbjct:  417 FSSKELRKATDNFSIDRVLGQGGQGTVYKGMLVDGSI-VAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSR 632          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 7.523e-36
Identity = 79/207 (38.16%), Postives = 122/207 (58.94%), Query Frame = 3
Query:   33 ATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQP-KVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPI 650
            AT G+ E  +LG GG G VY+G LP + I +A+KK      + + +F+ E++ + ++ HRN+V++LG C      LLVY+++ NG+L  +L+      +L W  R  +   VA  L YLH      +IHRD+K +N+LLD  L  ++ DFG ++L     +  TT V GTLGYL PE+  TG     +DV+SFG  L+E+  G++ +
Sbjct:  411 ATNGYDESRILGQGGQGTVYKGILPDNTI-VAIKKARLADSRQVDQFIHEVLVLSQINHRNVVKILGCCLETEVPLLVYEFITNGTLFDHLHGSIFDSSLTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDKEQLTTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQKAL 616          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 9.826e-36
Identity = 77/209 (36.84%), Postives = 122/209 (58.37%), Query Frame = 3
Query:   33 ATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLY-NQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDH-GTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIE 653
            AT+   +K ++G G  G +Y+ TL   K+    K +    + G    V EI +IG++RHRNL++L  +  RK   L++Y YM NGSL   L+   P   L+W  R+ +  G A GL YLH + +  ++HRD+K  N+LLD +L   + DFG+A+L D   T   +  V GT+GY+APE++ T   +  +DV+S+G  LLE+   ++ ++
Sbjct:  812 ATENLNDKYVIGKGAHGTIYKATLSPDKVYAVKKLVFTGIKNGSVSMVREIETIGKVRHRNLIKLEEFWLRKEYGLILYTYMENGSLHDILHETNPPKPLDWSTRHNIAVGTAHGLAYLHFDCDPAIVHRDIKPMNILLDSDLEPHISDFGIAKLLDQSATSIPSNTVQGTIGYMAPENAFTTVKSRESDVYSYGVVLLELITRKKALD 1020          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.676e-35
Identity = 82/217 (37.79%), Postives = 125/217 (57.60%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGY-CRRKGELLLVYDYMPNGSLDKYLYNQ-PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIE 653
            F   DL  AT      E++G   +G  Y+ TL     E+AVK++  ++ +G+KEF  E+ ++G++RH+NL+ L  Y    KGE LLV+DYM  GSL  +L+ + P+  + W  R  + KG++ GL +LH    + +IH ++ ASN+LLD + N  + D+GL+RL             GTLGY APE S+   A+   DV+S G  +LE+  G+ P E
Sbjct:  530 FTADDLLCATA-----EIMGKSTYGTAYKATLEDGN-EVAVKRLREKTTKGVKEFEGEVTALGKIRHQNLLALRAYYLGPKGEKLLVFDYMSKGSLSAFLHARGPETLIPWETRMKIAKGISRGLAHLHSN--ENMIHENLTASNILLDEQTNAHIADYGLSRLMTAAAATNVIATAGTLGYRAPEFSKIKNASAKTDVYSLGIIILELLTGKSPGE 738          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.676e-35
Identity = 89/225 (39.56%), Postives = 132/225 (58.67%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKE---FVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPK----VTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLY-----DHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRP 647
            F  +D+Y       E  ++GSGG G VYR  L KS   +AVKK+  E+ Q  +    F +E+ ++GR+RH N+V+LL  C  +    LVY++M NGSL   L+++ +      L+W  R+ +  G A GL YLH +    ++HRDVK++N+LLD E+  R+ DFGLA+       D  +D   + V G+ GY+APE+  T K    +DV+SFG  LLE+  G+RP
Sbjct:  677 FTEEDIY---PQLTEDNIIGSGGSGLVYRVKL-KSGQTLAVKKLWGETGQKTESESVFRSEVETLGRVRHGNIVKLLMCCNGEEFRFLVYEFMENGSLGDVLHSEKEHRAVSPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAKPLKREDNDGVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITGKRP 897          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.189e-35
Identity = 84/223 (37.67%), Postives = 132/223 (59.19%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVT---LNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYD-HGTDPQTTHVV----GTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIE 653
            F  +++  AT  F +  L+G+GGFG V++  L    I  A+K+    + +G  + + E+  + ++ HR+LV+LLG C      LL+Y+++PNG+L ++L+     T   L WR+R  +    A GL YLH   +  + HRDVK+SN+LLD +LN ++ DFGL+RL D   T    +H+     GTLGYL PE+ R  + T  +DV+SFG  LLE+   ++ I+
Sbjct:  351 FTGREITKATNNFSKDNLIGTGGFGEVFKAVLEDGTIT-AIKRAKLNNTKGTDQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAID 572          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.189e-35
Identity = 80/217 (36.87%), Postives = 122/217 (56.22%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPK-VTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIER 656
            F   +L  AT  F +  +LG GG G VY+G L   +I +AVK+        ++EF+ E+V + ++ HRN+V+LLG C      +LVY+++PNG L K L+++    T+ W  R  +   +A  L YLH      + HRD+K +N+LLD     ++ DFG +R         TT V GT GY+ PE+ ++ K T  +DV+SFG  L+E+  G +P  R
Sbjct:  404 FSSHELEKATDNFNKNRVLGQGGQGTVYKGMLVDGRI-VAVKRSKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLHDESDDYTMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSR 619          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.189e-35
Identity = 78/207 (37.68%), Postives = 121/207 (58.45%), Query Frame = 3
Query:   33 ATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQP-KVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPI 650
            AT G+ E  +LG GG G VY+G LP + I +A+KK        +++F+ E++ + ++ HRN+V+LLG C      LLVY+++ +G+L  +L+      +L W  R  +   +A  L YLH      +IHRD+K +N+LLD  L  ++ DFG +RL     +   T V GTLGYL PE+  TG     +DV+SFG  L+E+  G++ +
Sbjct:  406 ATDGYDENRILGQGGQGTVYKGILPDNSI-VAIKKARLGDNSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRMAVEIAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKAL 611          
The following BLAST results are available for this feature:
BLAST of FC931420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1570_ARATH7.523e-3637.50Probable LRR receptor-like serine/threonine-protei... [more]
WAKLF_ARATH7.523e-3636.82Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
WAKLA_ARATH7.523e-3637.79Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
WAK3_ARATH7.523e-3638.16Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
RPK1_IPONI9.826e-3636.84Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
IMK2_ARATH1.676e-3537.79Probably inactive leucine-rich repeat receptor-lik... [more]
HSL2_ARATH1.676e-3539.56LRR receptor-like serine/threonine-protein kinase ... [more]
WAKLQ_ARATH2.189e-3537.67Wall-associated receptor kinase-like 20 OS=Arabido... [more]
WAKLB_ARATH2.189e-3536.87Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
WAK4_ARATH2.189e-3537.68Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionC34104H09EF PostHarvP1 Citrus clementina cDNA clone C34104H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931420 ID=FC931420; Name=FC931420; organism=Citrus clementina; type=EST; length=700bp
CTCACAGGTTCAGGTACAAAGATCTTTACATTGCCACTAAAGGGTTCAGA
GAGAAAGAACTGCTAGGCAGCGGCGGATTTGGGAGAGTGTATAGGGGTAC
ACTGCCCAAATCCAAAATTGAGATTGCAGTGAAGAAGATTTCTCACGAAT
CCAGACAGGGGATGAAGGAATTCGTTGCGGAGATTGTGAGCATCGGTCGC
CTCAGGCACCGGAATTTAGTGCAACTCTTGGGATATTGCCGGCGTAAAGG
GGAGCTGCTTTTGGTCTATGATTACATGCCTAATGGAAGCTTAGACAAAT
ACCTCTATAACCAACCAAAAGTCACACTAAACTGGAGACAAAGATATGGA
GTCATCAAAGGTGTCGCATTAGGCCTGTTATATTTGCACGAAGAATGGGA
ACAAGTTGTGATTCACAGAGATGTTAAGGCAAGTAACGTGTTGCTTGATG
GTGAATTAAACGGAAGATTGGGAGATTTCGGCCTGGCAAGATTATACGAC
CACGGAACAGATCCACAAACAACGCACGTTGTGGGAACACTTGGGTACCT
TGCCCCTGAGCACAGTCGGACAGGCAAGGCCACCACAAGCGCTGATGTGT
TTTCATTTGGGGCATTTTTGCTTGAAGTTGCTTGCGGGAGAAGGCCAATT
GAGAGACAGAGCCAGAAGAGAATTTATTTTGGTTGATTGCGTGNTTGACT
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