FC931420

Overview
NameFC931420
Unique NameFC931420
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.876e-35
Identity = 82/218 (37.61%), Postives = 125/218 (57.34%), Query Frame = 3
Query:   45 FREKELLGSGGFGRVYRGTLPKSKIE-IAVKKI-SHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYN-------QPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARL-YDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQSQK 668
            F  K L+G G +GRV+ G   K K E +A+KK+ +  S +   +F +++  + RL+H + V+LLGYC      +L+Y +   GSL   L+        +P   LNW QR  +  G A GL +LHE+ +  ++HRDV++SNVLL  +   ++ DF L     D      +T V+GT GY APE++ TG+ T  +DV+SFG  LLE+  GR+P++    K
Sbjct:   73 FGNKALIGEGSYGRVFCG---KFKGEAVAIKKLDASSSEEPDSDFTSQLSVVSRLKHDHFVELLGYCLEANNRILIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPK 287          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: IMK3_ARATH (Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana GN=IMK3 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.876e-35
Identity = 87/217 (40.09%), Postives = 122/217 (56.22%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGY-CRRKGELLLVYDYMPNGSLDKYLYNQ-PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIE 653
            F   DL  AT      E++G   +G VY+ TL     ++AVK++  +  +  KEF  EI  +GR+RH NL+ L  Y    KGE L+V+DYM  GSL  +L+ + P V +NW  R  +IKG+A GL YLH      +IH ++ +SNVLLD  +  ++ D+GL+RL             G LGY APE S+  KA T  DV+S G  +LE+  G+ P E
Sbjct:  481 FTADDLLCATA-----EIMGKSTYGTVYKATLEDGS-QVAVKRLREKITKSQKEFENEINVLGRIRHPNLLALRAYYLGPKGEKLVVFDYMSRGSLATFLHARGPDVHINWPTRMSLIKGMARGLFYLHTHAN--IIHGNLTSSNVLLDENITAKISDYGLSRLMTAAAGSSVIATAGALGYRAPELSKLKKANTKTDVYSLGVIILELLTGKSPSE 689          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.369e-35
Identity = 77/216 (35.65%), Postives = 126/216 (58.33%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQ--PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPI 650
            F  ++L  AT+ F    +LG GG G VY+G L   +I +AVKK        ++EF+ E+V + ++ HRN+V+LLG C      +LVY+++PNG+L ++L+++    +   W  R  +   +A  L YLH      + HRDVK++N++LD +   ++ DFG +R         TT V GT+GY+ PE+ ++ + T  +DV+SFG  L+E+  G + I
Sbjct:  435 FSSRELEKATENFSSNRILGQGGQGTVYKGMLVDGRI-VAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSI 649          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.318e-35
Identity = 81/214 (37.85%), Postives = 121/214 (56.54%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPK-VTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRP 647
            F  K+L  AT  F    +LG GG G VY+G L   +I +AVK+        ++EF+ E+  + ++ HRN+V+L+G C      +LVY+++PNG L K L++     T+ W  R  +   +A  L YLH      V HRDVK +N+LLD +   ++ DFG +R  +      TT V GT GYL PE+ +T + T  +DV+SFG  L+E+  G +P
Sbjct:  409 FSSKELEKATDNFNMNRVLGQGGQGTVYKGMLVDGRI-VAVKRSKVLDEDKVEEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKRLHHDSDDYTMTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITGEKP 621          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: IRAK1_MOUSE (Interleukin-1 receptor-associated kinase 1 OS=Mus musculus GN=Irak1 PE=1 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 1.086e-34
Identity = 86/228 (37.72%), Postives = 122/228 (53.51%), Query Frame = 3
Query:   36 TKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHES----RQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKV--TLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARL--------YDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQSQKRIY 677
            T  F E+  +G GGFG VYR  +  +    AVK++  E+        + F+ E+  + R RH N+V   GYC   G   LVY ++PNGSL+  L+ Q +    L+W QR  ++ G A  + +LH++    +IH D+K+SNVLLD  L  +LGDFGLAR             T  +T+ V GTL YL  E+ +TG+     D FSFG  +LE   G+R +  Q  K  Y
Sbjct:  209 TCNFSEELRIGEGGFGCVYRAVMRNTTY--AVKRLKEEADLEWTMVKQSFLTEVEQLSRFRHPNIVDFAGYCAESGLYCLVYGFLPNGSLEDQLHLQTQACSPLSWPQRLDILLGTARAIQFLHQD-SPSLIHGDIKSSNVLLDERLMPKLGDFGLARFSRFAGAKASQSSTVARTSTVRGTLAYLPEEYIKTGRLAVDTDTFSFGVVILETLAGQRAVRTQGAKTKY 433          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.086e-34
Identity = 88/236 (37.29%), Postives = 129/236 (54.66%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFV-------AEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTL------NWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARL-----YDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQS 662
            F + +L  AT  F  +  +GSG FG VYRG L   + E+A+K+   E    MK+F        +EI  + RL H++LV+L+GYC  + E LLVYDYM NG+L  +L+++  V        +W+ R  +    A G+ YLH      +IHRD+K+SN+LLD     R+ DFGL+ +      DH    + T   GT+GY+ PE+      T  +DV+  G  LLE+  G+R I R +
Sbjct:  484 FSFSELASATGNFSLENKIGSGSFGVVYRGKLNDGR-EVAIKR--GEVNAKMKKFQEKETAFDSEIAFLSRLHHKHLVRLVGYCEEREEKLLVYDYMKNGALYDHLHDKNNVEKHSSLINSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDSNWVARVSDFGLSLMGPVLGKDHNPYQRPTKAAGTVGYIDPEYYSLNVLTDKSDVYGLGVVLLELLTGKRAIFRNN 716          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34
Identity = 86/229 (37.55%), Postives = 124/229 (54.15%), Query Frame = 3
Query:    6 RFRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKI-------------SHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLY-DHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPI 650
            RF Y ++   T  F +  ++G GGFG VY G+L +   EIAVK I             S  S Q  KEF  E   +  + HRNL   +GYC     + L+Y+YM NG+L  YL ++    L+W +R  +    A GL YLH      ++HRDVK +N+LL+  L  ++ DFGL++++ +       T V+GT GY+ PE+  T K    +DV+SFG  LLE+  G+R I
Sbjct:  556 RFTYSEVSSITNNFNK--VIGKGGFGIVYLGSL-EDGTEIAVKMINDSSFGKSKGSSSSSSSSQVSKEFQVEAELLLTVHHRNLASFVGYCDDGRSMALIYEYMANGNLQDYLSSENAEDLSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSI 781          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34
Identity = 79/215 (36.74%), Postives = 124/215 (57.67%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPK-VTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPI 650
            F   DL  AT  F    +LG GG G VY+G L    I +AVKK      + ++EF+ EI+ + ++ HRN+V++LG C      +LVY+++PN +L  +L+N  +   ++W  R  +   VA  L YLH      + HRDVK++N+LLD +   ++ DFG++R         TT V GT+GY+ PE+ ++   T  +DV+SFG  L+E+  G +P+
Sbjct:  378 FSSNDLENATDRFNASRILGQGGQGTVYKGMLEDGMI-VAVKKSKALKEENLEEFINEIILLSQINHRNVVKILGCCLETEVPILVYEFIPNRNLFDHLHNPSEDFPMSWEVRLCIACEVADALSYLHSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISRSVAIDDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPV 591          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.420e-34
Identity = 77/216 (35.65%), Postives = 125/216 (57.87%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPK--VTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPI 650
            F  K+L  AT+ F E  +LG GG G VY+G L   +  +AVKK        ++EF+ E+V + ++ HR++V+LLG C      +LVY+++ NG+L K+++ +     T+ W  R  +   +A  L YLH      + HRD+K++N+LLD +   ++ DFG +R         TT + GT+GY+ PE+ R+ + T  +DV+SFG  L E+  G +P+
Sbjct:  432 FTSKELEKATENFSENRVLGHGGQGTVYKGMLVDGRT-VAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITGDKPV 646          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y5005_ARATH (Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34
Identity = 91/231 (39.39%), Postives = 129/231 (55.84%), Query Frame = 3
Query:    6 RFRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGE---LLLVYDYMPNGSLDKYLY----NQPKV---TLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQSQK 668
            +F+ +DL  AT GFR   L+G GG G V++G L K   ++AVK+I  E + G +EF +E+ +I  ++H+NLV+L GY           LVYDY+ N SLD +++    N+ +     L+W QRY V   VA  L YLH +    ++H DVK  N+LLD      + DFGL++L         T + GT GYLAPE       +  +DV+S+G  LLE+  GRR I R   K
Sbjct:   92 KFKLEDLEEATDGFRS--LIGKGGSGSVFKGVL-KDGSQVAVKRIEGEEK-GEREFRSEVAAIASVQHKNLVRLYGYSSSTSANRPRFLVYDYIVNSSLDIWIFPDRGNRGRSGGGCLSWEQRYQVAIDVAKALAYLHHDCRSKILHLDVKPENILLDENFRAVVTDFGLSKLIARDESRVLTDIRGTRGYLAPEWLLEHGISEKSDVYSYGIVLLEMIGGRRSISRVEVK 318          
The following BLAST results are available for this feature:
BLAST of FC931420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y2197_ARATH4.876e-3537.61Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
IMK3_ARATH4.876e-3540.09Probable leucine-rich repeat receptor-like protein... [more]
WAKLH_ARATH6.369e-3535.65Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
WAKLI_ARATH8.318e-3537.85Wall-associated receptor kinase-like 22 OS=Arabido... [more]
IRAK1_MOUSE1.086e-3437.72Interleukin-1 receptor-associated kinase 1 OS=Mus ... [more]
ACCR3_ARATH1.086e-3437.29Putative serine/threonine-protein kinase-like prot... [more]
Y4291_ARATH1.853e-3437.55Probable LRR receptor-like serine/threonine-protei... [more]
WAKLG_ARATH1.853e-3436.74Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
WAKLM_ARATH2.420e-3435.65Wall-associated receptor kinase-like 17 OS=Arabido... [more]
Y5005_ARATH3.161e-3439.39Probable receptor-like protein kinase At5g20050 OS... [more]

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Properties
Property NameValue
Genbank descriptionC34104H09EF PostHarvP1 Citrus clementina cDNA clone C34104H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931420 ID=FC931420; Name=FC931420; organism=Citrus clementina; type=EST; length=700bp
CTCACAGGTTCAGGTACAAAGATCTTTACATTGCCACTAAAGGGTTCAGA
GAGAAAGAACTGCTAGGCAGCGGCGGATTTGGGAGAGTGTATAGGGGTAC
ACTGCCCAAATCCAAAATTGAGATTGCAGTGAAGAAGATTTCTCACGAAT
CCAGACAGGGGATGAAGGAATTCGTTGCGGAGATTGTGAGCATCGGTCGC
CTCAGGCACCGGAATTTAGTGCAACTCTTGGGATATTGCCGGCGTAAAGG
GGAGCTGCTTTTGGTCTATGATTACATGCCTAATGGAAGCTTAGACAAAT
ACCTCTATAACCAACCAAAAGTCACACTAAACTGGAGACAAAGATATGGA
GTCATCAAAGGTGTCGCATTAGGCCTGTTATATTTGCACGAAGAATGGGA
ACAAGTTGTGATTCACAGAGATGTTAAGGCAAGTAACGTGTTGCTTGATG
GTGAATTAAACGGAAGATTGGGAGATTTCGGCCTGGCAAGATTATACGAC
CACGGAACAGATCCACAAACAACGCACGTTGTGGGAACACTTGGGTACCT
TGCCCCTGAGCACAGTCGGACAGGCAAGGCCACCACAAGCGCTGATGTGT
TTTCATTTGGGGCATTTTTGCTTGAAGTTGCTTGCGGGAGAAGGCCAATT
GAGAGACAGAGCCAGAAGAGAATTTATTTTGGTTGATTGCGTGNTTGACT
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