FC931420

Overview
NameFC931420
Unique NameFC931420
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: IRAK4_MOUSE (Interleukin-1 receptor-associated kinase 4 OS=Mus musculus GN=Irak4 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.243e-30
Identity = 84/236 (35.59%), Postives = 126/236 (53.39%), Query Frame = 3
Query:    3 HRFRYKDLYIATKGFREKEL------LGSGGFGRVYRGTLPKSKIEIAVKKISH----ESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGS-LDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDH-GTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQSQKRI 674
            H F + +L   T  F E+        +G GGFG VY+G +  +   +AVKK+       + +  ++F  EI  +   +H NLV+LLG+      L LVY YMPNGS LD+         L+W  R  V +G A G+ +LHE      IHRD+K++N+LLD +   ++ DFGLAR          T+ +VGT  Y+APE  R G+ T  +D++SFG  LLE+  G   ++   + ++
Sbjct:  166 HSFSFHELKSITNNFDEQPASAGGNRMGEGGFGVVYKGCV--NNTIVAVKKLGAMVEISTEELKQQFDQEIKVMATCQHENLVELLGFSSDSDNLCLVYAYMPNGSLLDRLSCLDGTPPLSWHTRCKVAQGTANGIRFLHENHH---IHRDIKSANILLDKDFTAKISDFGLARASARLAQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLELITGLAAVDENREPQL 395          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y5393_ARATH (Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.120e-30
Identity = 75/214 (35.05%), Postives = 124/214 (57.94%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDP-QTTHVVGTLGYLAPE-HSRT-GKATTSADVFSFGAFLLEVACGR 641
            + Y +L   TK F    ++G GGFG VY G L   + ++AVK +  + +   ++F+ E+ S+ +  H N+V LLG+C    +  +VY+++ NGSLD+++     +T +    YG+  G+A GL YLH   +  ++H D+K  N+LLDG L  ++ DFGLA+L +            GT+GY+APE  SR  G+ +  +DV+SFG  ++++   R
Sbjct:  488 YTYAELKKITKSF--SYIIGKGGFGTVYGGNLSNGR-KVAVKVLK-DLKGSAEDFINEVASMSQTSHVNIVSLLGFCFEGSKRAIVYEFLENGSLDQFMSRNKSLTQDVTTLYGIALGIARGLEYLHYGCKTRIVHFDIKPQNILLDGNLCPKVSDFGLAKLCEKRESVLSLMDTRGTIGYIAPEVFSRMYGRVSHKSDVYSFGMLVIDMIGAR 697          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.769e-30
Identity = 75/215 (34.88%), Postives = 119/215 (55.35%), Query Frame = 3
Query:    6 RFRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPI 650
            + +  DL  AT GF    ++ S   G  Y+  LP     + VK++S       K+F +EI  +G++RH NLV LLG+C  + E+LLVY +M NG+L   L       ++W  R  V  G A GL +LH   + + +H+ + ++ +LLD + + R+ D+GL +L        ++   G  GY+APE+S T  A+ S DV+ FG  LLE+  G++P+
Sbjct:  282 KIKLVDLIEATNGFDSGNIVVSSRSGVSYKADLPDGST-LEVKRLSSCCELSEKQFRSEINKLGQIRHPNLVPLLGFCVVEDEILLVYKHMANGTLYSQLQQWD---IDWPTRVRVAVGAARGLAWLHHGCQPLYMHQYISSNVILLDEDFDARVIDYGLGKLVSSQDSKDSSFSNGKFGYVAPEYSSTMVASLSGDVYGFGIVLLEIVTGQKPV 492          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.616e-30
Identity = 79/225 (35.11%), Postives = 126/225 (56.00%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLY---NQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDP--------QTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPI 650
            F ++++  AT  F E+  +G G +G VY+  L  +     VK +     Q  K+F  E+  + ++RH +LV LLG C  +G L  VY+YM NGSL+  L+   N P   L W +R+ +   VA  L++LH+   + +IHRD+K +N+LLD     ++GD GL+ +     DP        + T  VGTL Y+ PE+ RTG+ ++ +D++SFG  LL++   +  I
Sbjct:  468 FAWEEIMAATSSFSEELKIGMGAYGAVYKCNLHHTTA--VVKVLQSAENQLSKQFQQELEILSKIRHPHLVLLLGACPEQGAL--VYEYMENGSLEDRLFQVNNSPP--LPWFERFRIAWEVAAALVFLHKSKPKPIIHRDLKPANILLDHNFVSKVGDVGLSTMVQ--VDPLSTKFTIYKQTSPVGTLCYIDPEYQRTGRISSKSDIYSFGMILLQLLTAKPAI 684          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: CCR35_ARATH (Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana GN=At3g51990 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.169e-30
Identity = 85/222 (38.29%), Postives = 124/222 (55.86%), Query Frame = 3
Query:    6 RFRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKG-ELLLVYDYMPNGSLDKYLYNQPKVTL----NWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLA-RLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIE 653
            RF ++DL  AT GF    LLG G  G VY+  +      IAVK+ S +SR+  +EF  E   + R+R    V LLG+      E LLV ++M NGSL   +++   +      +W +R  +   +A  +  LH + E  +IHRD+K++NVL+D  LN +LGDFGLA R        ++T   GT+GYL P++    + +T  DVFSFG  LLE+  GR+ I+
Sbjct:   46 RFLHRDLESATGGFDINNLLGRGSHGSVYKAVIGSR--HIAVKRPS-KSREISREFHNEFEILSRIRSPRFVNLLGFSADNSKEPLLVVEFMGNGSLYDVIHSDTVLNSGAISSWSKRIKIALQIAKAVHLLHSQ-ETPIIHRDIKSANVLMDKNLNAKLGDFGLAIRCNVDDQKVKSTPPAGTMGYLDPDYVTADRLSTKTDVFSFGILLLEIISGRKAID 263          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29
Identity = 73/212 (34.43%), Postives = 119/212 (56.13%), Query Frame = 3
Query:   33 ATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGEL-LLVYDYMPNGSLDKYLY---NQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQ--TTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPI 650
            AT+ F E+ +L    +G +++       + ++++++ + S      F  E   +G+++HRN+  L GY     +L LLVYDYMPNG+L   L    +Q    LNW  R+ +  G+A GL +LH+     ++H D+K  NVL D +    + DFGL RL          T + +GTLGY++PE + +G+ T  +D++SFG  LLE+  G+RP+
Sbjct:  837 ATRQFDEENVLSRTRYGLLFKANYNDGMV-LSIRRLPNGSLLNENLFKKEAEVLGKVKHRNITVLRGYYAGPPDLRLLVYDYMPNGNLSTLLQEASHQDGHVLNWPMRHLIALGIARGLGFLHQS---NMVHGDIKPQNVLFDADFEAHISDFGLDRLTIRSPSRSAVTANTIGTLGYVSPEATLSGEITRESDIYSFGIVLLEILTGKRPV 1044          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: PUB51_ARATH (U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.061e-29
Identity = 75/227 (33.04%), Postives = 127/227 (55.95%), Query Frame = 3
Query:    6 RFRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGM-KEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQ-PKVT------LNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDP-------QTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGR 641
            +F ++++  AT  F ++  +G GG+G VYR  L  + + +   K+ H  +  + K+F  E+  + ++RH +L+ LLG C  +G L  VY+YM NGSL++ L  + P V       L W +R+ +   +A  L +LH    + ++HRD+K +N+LLD     ++GD GL+++ +   DP         T  VGT  Y+ PE+ RTG  T  +D+++FG  LL++   R
Sbjct:  416 KFEWEEIVEATSSFSDELKIGVGGYGSVYRCNLHHTTVAV---KVLHSDKSSLTKQFHQELEILSKIRHPHLLLLLGACPERGSL--VYEYMHNGSLEERLMKRRPNVDTPQPPPLRWFERFRIAWEIASALYFLHTNEPRPIVHRDLKPANILLDRNNVSKIGDVGLSKMVN--LDPSHASTVFNETGPVGTFFYIDPEYQRTGVVTPESDIYAFGIILLQLVTAR 635          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.998e-29
Identity = 80/220 (36.36%), Postives = 119/220 (54.09%), Query Frame = 3
Query:    6 RFRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQP--KVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLY---DHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPI 650
            + +  DL  AT  F    +  S   G  Y+  LP     +AVK++S     G K+F +E+  +G LRH NLV LLGYC  + E LLVY +M NG+L   L+N       L+W  R  +  G A GL +LH   +   +H+ + ++ +LLD + + R+ D+GLA+L    D          +G LGY+APE+S T  A+   DV+ FG  LLE+  G++P+
Sbjct:  288 KIKLGDLMAATNNFSSGNIDVSSRTGVSYKADLPDGSA-LAVKRLS-ACGFGEKQFRSEMNKLGELRHPNLVPLLGYCVVEDERLLVYKHMVNGTLFSQLHNGGLCDAVLDWPTRRAIGVGAAKGLAWLHHGCQPPYLHQFISSNVILLDDDFDARITDYGLAKLVGSRDSNDSSFNNGDLGELGYVAPEYSSTMVASLKGDVYGFGIVLLELVTGQKPL 505          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.998e-29
Identity = 78/225 (34.67%), Postives = 123/225 (54.67%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKE--FVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLY--NQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTT-HVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQSQK 668
            F    L   T  F  + L+G+G  G VYR  LP  K+  AV+K+  +S    +E  F+  + +I R+RH N+VQL+G+C    + LL+++Y  NG+L   L+  ++ K+ L+W  R  +    A  L YLHE  +   IHR+ K++N+LLD ++   + D GLA L   G   Q +  ++   GY APE    G  T   DV+SFG  +LE+  GR+  +++  +
Sbjct:  466 FTVASLQQHTNSFSHENLIGTGMLGSVYRAELPGGKL-FAVRKLDKKSPNHEEEGKFLELVNNIDRIRHANIVQLVGFCSEHSQRLLIHEYCRNGTLHDLLHIDDRLKIELSWNVRVRIALEAAKALEYLHEICDPPSIHRNFKSANILLDDDIRVHVSDCGLAPLISSGAVSQLSGQLLAAYGYGAPEF-EYGIYTMKCDVYSFGVVMLELLTGRKSYDKKRDR 688          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: KPEL_DROME (Serine/threonine-protein kinase pelle OS=Drosophila melanogaster GN=pll PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.998e-29
Identity = 81/226 (35.84%), Postives = 118/226 (52.21%), Query Frame = 3
Query:   15 YKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVA------EIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLY----NQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDP--QTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIER 656
            Y +L  AT G+     LG GGFG VYRG     ++++A+K +++ S    ++ V       E+  +  +RH N++ L GY  + G+  LVY  M  GSL+  L       P   L W+QR+ +  G A G+ +LH      +IH D+K +N+LLD  L  ++GDFGL R      D   +   V GT  YL PE     + +T  DV+SFG  LLEV  GR+  +R
Sbjct:  203 YAELENATDGWSPDNRLGQGGFGDVYRGKW--KQLDVAIKVMNYRSPNIDQKMVELQQSYNELKYLNSIRHDNILALYGYSIKGGKPCLVYQLMKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPANILLDQCLQPKIGDFGLVREGPKSLDAVVEVNKVFGTKIYLPPEFRNFRQLSTGVDVYSFGIVLLEVFTGRQVTDR 426          
The following BLAST results are available for this feature:
BLAST of FC931420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IRAK4_MOUSE1.243e-3035.59Interleukin-1 receptor-associated kinase 4 OS=Mus ... [more]
Y5393_ARATH2.120e-3035.05Probable receptor-like protein kinase At5g39030 OS... [more]
Y1699_ARATH2.769e-3034.88Probable LRR receptor-like serine/threonine-protei... [more]
PUB35_ARATH3.616e-3035.11U-box domain-containing protein 35 OS=Arabidopsis ... [more]
CCR35_ARATH6.169e-3038.29Serine/threonine-protein kinase-like protein At3g5... [more]
Y4361_ARATH1.795e-2934.43Probable LRR receptor-like serine/threonine-protei... [more]
PUB51_ARATH3.061e-2933.04U-box domain-containing protein 51 OS=Arabidopsis ... [more]
Y1719_ARATH3.998e-2936.36Probable inactive receptor kinase At1g27190 OS=Ara... [more]
SRF1_ARATH3.998e-2934.67Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
KPEL_DROME3.998e-2935.84Serine/threonine-protein kinase pelle OS=Drosophil... [more]

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Properties
Property NameValue
Genbank descriptionC34104H09EF PostHarvP1 Citrus clementina cDNA clone C34104H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931420 ID=FC931420; Name=FC931420; organism=Citrus clementina; type=EST; length=700bp
CTCACAGGTTCAGGTACAAAGATCTTTACATTGCCACTAAAGGGTTCAGA
GAGAAAGAACTGCTAGGCAGCGGCGGATTTGGGAGAGTGTATAGGGGTAC
ACTGCCCAAATCCAAAATTGAGATTGCAGTGAAGAAGATTTCTCACGAAT
CCAGACAGGGGATGAAGGAATTCGTTGCGGAGATTGTGAGCATCGGTCGC
CTCAGGCACCGGAATTTAGTGCAACTCTTGGGATATTGCCGGCGTAAAGG
GGAGCTGCTTTTGGTCTATGATTACATGCCTAATGGAAGCTTAGACAAAT
ACCTCTATAACCAACCAAAAGTCACACTAAACTGGAGACAAAGATATGGA
GTCATCAAAGGTGTCGCATTAGGCCTGTTATATTTGCACGAAGAATGGGA
ACAAGTTGTGATTCACAGAGATGTTAAGGCAAGTAACGTGTTGCTTGATG
GTGAATTAAACGGAAGATTGGGAGATTTCGGCCTGGCAAGATTATACGAC
CACGGAACAGATCCACAAACAACGCACGTTGTGGGAACACTTGGGTACCT
TGCCCCTGAGCACAGTCGGACAGGCAAGGCCACCACAAGCGCTGATGTGT
TTTCATTTGGGGCATTTTTGCTTGAAGTTGCTTGCGGGAGAAGGCCAATT
GAGAGACAGAGCCAGAAGAGAATTTATTTTGGTTGATTGCGTGNTTGACT
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