FC931420

Overview
NameFC931420
Unique NameFC931420
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: DRKA_DICDI (Probable serine/threonine-protein kinase drkA OS=Dictyostelium discoideum GN=drkA PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.058e-24
Identity = 71/197 (36.04%), Postives = 109/197 (55.33%), Query Frame = 3
Query:   63 LGSGGFGRVYRGTLPKSKIEIAVKKI-SHESRQG-MKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRP 647
            +G G +G VY GT   S  ++AVKK+ +H   +  +KEF  EI  +  LRH N++Q LG C    ++ +  +YMP GSL   L++Q  + L W     ++   A G++YLH     V++HRD+K+ N+L+D     ++ DFGL+ +   G    T    GT  + +PE  R+ + T  ADV+SFG  L E A  + P
Sbjct:  380 IGKGNYGEVYLGTWRGS--QVAVKKLPAHNINENILKEFHREINLMKNLRHPNVIQFLGSCLIPPDICICTEYMPRGSLYSILHDQ-ALQLQWSLLIKMMIDAAKGVIYLHNS-TPVILHRDLKSHNLLVDENWKVKVADFGLSTIEQQGA---TMTACGTPCWTSPEVLRSQRYTEKADVYSFGIILWECATRQDP 569          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.606e-24
Identity = 70/212 (33.02%), Postives = 114/212 (53.77%), Query Frame = 3
Query:   15 YKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHE-SRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRP 647
            + D+ I+    +    LG G FG VY+G    S + I   KI+ + + Q ++EF  E+  + RLRH N+V L+  C     L  + +Y+P GSL   L+++ K+ +N +    +   +A G+ YLH      VIHRD+K+ N+LLD  +N ++ DFGL++L    T  + T  +G+  +++PE       T   DV++FG  L E+  G  P
Sbjct:  652 FSDIEISFSELKISSKLGEGTFGVVYKGLWRGSSVAIKQIKINEDVNNQVLEEFRKELTILSRLRHPNIVLLMAACTAPPNLCFITEYLPGGSLYDALHSK-KIKMNMQLYKKLAIQIAQGMNYLHLSG---VIHRDIKSLNLLLDEHMNVKICDFGLSKLKSKST--EMTKSIGSPIWMSPELLMGEDYTEKVDVYAFGIILWELGTGELP 857          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.606e-24
Identity = 67/200 (33.50%), Postives = 106/200 (53.00%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLY---NQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRP 647
            E+LG G  G  Y+  L +    + VK++  +     KEF  ++  +G+++H N++ L  Y   K E LLV+D+MP GSL   L+      +  L+W  R  +    A GL +LH   +  ++H ++KASN+LL    +  + D+GL +L+ + + P         GY APE   T K T  +DV+SFG  LLE+  G+ P
Sbjct:  355 EVLGKGSVGTSYKAVLEEGTT-VVVKRLK-DVMASKKEFETQMEVVGKIKHPNVIPLRAYYYSKDEKLLVFDFMPTGSLSALLHGSRGSGRTPLDWDNRMRIAITAARGLAHLHVSAK--LVHGNIKASNILLHPNQDTCVSDYGLNQLFSNSSPPNR-----LAGYHAPEVLETRKVTFKSDVYSFGVLLLELLTGKSP 545          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y5516_ARATH (Probable receptor kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.127e-23
Identity = 74/218 (33.94%), Postives = 112/218 (51.38%), Query Frame = 3
Query:    3 HRFRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRL-RHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLY-NQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPI 650
            H F  +DL  A+      E+LG G FG  Y+  L +    + VK++  E     KEF  ++  +G++ +H N V LL Y   K E LLVY YM  GSL   ++ N+    ++W  R  +  G +  + YLH       +H D+K+SN+LL  +L   L D  L  L++       TH   T+GY APE   T + +  +DV+SFG  +LE+  G+ P+
Sbjct:  338 HNFDLEDLLKASA-----EVLGKGSFGTAYKAVL-EDTTAVVVKRL-REVVASKKEFEQQMEIVGKINQHSNFVPLLAYYYSKDEKLLVYKYMTKGSLFGIMHGNRGDRGVDWETRMKIATGTSKAISYLHS---LKFVHGDIKSSNILLTEDLEPCLSDTSLVTLFN-----LPTHTPRTIGYNAPEVIETRRVSQRSDVYSFGVVILEMLTGKTPL 540          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.127e-23
Identity = 73/227 (32.16%), Postives = 109/227 (48.02%), Query Frame = 3
Query:   18 KDLYIATKGFRE----------KELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQP---KVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQ 659
            KDL    K F E           E+LG G  G  Y+ +     + +AVK++  +     KEF   +  +G + H NLV L+ Y   + E LLV++YM  GSL   L+      +  LNW  R G+  G A  + YLH   +    H ++K+SN+LL      ++ D+GLA +    + P         GY APE +   K +  ADV+SFG  +LE+  G+ P  +Q
Sbjct:  326 KDLTFFVKSFGEFDLDGLLKASAEVLGKGTVGSSYKASFEHGLV-VAVKRL-RDVVVPEKEFRERLHVLGSMSHANLVTLIAYYFSRDEKLLVFEYMSKGSLSAILHGNKGNGRTPLNWETRAGIALGAARAISYLHSR-DGTTSHGNIKSSNILLSDSYEAKVSDYGLAPIISSTSAPNRID-----GYRAPEITDARKISQKADVYSFGVLILELLTGKSPTHQQ 544          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: EPB1B_XENLA (Ephrin type-B receptor 1-B (Fragment) OS=Xenopus laevis GN=ephb1-B PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.472e-23
Identity = 75/232 (32.33%), Postives = 133/232 (57.33%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREK---------ELLGSGGFGRVYRGTLP---KSKIEIAVKKI-SHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYL-YNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYDHGTDPQTTHVVG---TLGYLAPEHSRTGKATTSADVFSFGAFLLEV-ACGRRP 647
            F Y+D   A + F ++         E++G+G FG VY+G L    K +I +A+K + +  S +  ++F++E   +G+  H N+++L G   +   ++++ ++M NG+LD +L  N  + T+   Q  G+++G+A G+ YL    E   +HRD+ A N+L++  L  ++ DFGL+R L D  +DP  T  +G    + + APE  R  K T+++DV+S+G  + EV + G RP
Sbjct:  516 FTYEDPNEAVREFAKEIDVSFVKIEEVIGAGEFGEVYKGRLKLPSKREISVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTSSLGGKIPVRWTAPEAIRYRKFTSASDVWSYGIVMWEVMSYGERP 742          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: RLK_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RLK OS=Arabidopsis thaliana GN=RLK PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.922e-23
Identity = 69/201 (34.33%), Postives = 105/201 (52.24%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQP---KVTLNWRQRYGVIKGVALGLLYLHEEWEQVVI-HRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRP 647
            E+LGSG FG  Y+  L   ++ + VK+    +  G  EF   +  +GRL H NL+ ++ Y  RK E LLV D+   GSL   L++     K +L+W  R  ++KGVA GL YLH++   ++  H  +K+SNVLL       L D+GL  L +     Q    +    Y +PE+ +  + T   DV+  G  +LE+  G+ P
Sbjct:  361 EILGSGCFGASYKAVLSSGQMMV-VKRFKQMNNAGRDEFQEHMKRLGRLMHHNLLSIVAYYYRKEEKLLVCDFAERGSLAINLHSNQSLGKPSLDWPTRLKIVKGVAKGLFYLHQDLPSLMAPHGHLKSSNVLLTKTFEPLLTDYGLIPLIN-----QEKAQMHMAAYRSPEYLQHRRITKKTDVWGLGILILEILTGKFP 555          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: YR818_MIMIV (Putative serine/threonine-protein kinase/receptor R818 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R818 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.304e-23
Identity = 66/197 (33.50%), Postives = 105/197 (53.30%), Query Frame = 3
Query:   63 LGSGGFGRVYRGTLPKSKIEIAVKKISHES--RQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRP 647
            +G G +G V  G      I +AVKK   +    + M EF AEI  + +LRH +++ ++G C ++  + +V ++M NGSL   +         W+ +  ++   ALG+ YLH   + ++IHRD+K SN+L+D  +N ++ DFG AR+ +  +        GT  + APE  R  K T   DVFSFG  + EV   + P
Sbjct: 1400 IGVGSYGIVNMGKW--KNINVAVKKFVKQKIDEKQMLEFRAEIAFLSQLRHPHIILMIGACLKRPNICIVTEFMGNGSLRNVIKTTKP---EWKLKIKMLYQTALGIGYLHNS-DPIIIHRDIKPSNILVDDSMNVKIADFGFARIKEENS---VMTRCGTPCWTAPEIIRGEKYTEKVDVFSFGIVMWEVLTCKEP 1587          

HSP 2 Score: 84.3445 bits (207), Expect = 6.621e-16
Identity = 63/203 (31.03%), Postives = 103/203 (50.74%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKSKIEIAVKKI--SHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTT--HVVGTLGYLAPE--HSRTGKATTSADVFSFGAFLLEVACGRRP 647
            E LGSGG G V++     +  E+AVKK+  S+ ++   + F  EI  +  LRH N+V  +    R   + +V ++M  GSL   L N+    +    R  +    A G+ +LH      ++HRD+K+ N+LLD + N ++ DFGL ++ D+     +T    V ++ + APE    +       ADV+SFG  + E+    RP
Sbjct:  797 ESLGSGGSGEVFKAMWKGT--EVAVKKLVNSNITKDAERNFKQEIHRMTSLRHPNVVLFMAASTRPPNMCIVMEFMSLGSLYDLLGNELVTEIPPVLRIRIAYQAAKGMHFLH---SSDIVHRDLKSLNLLLDSKWNVKVSDFGLTKIKDNNKGKSSTKEDSVCSIQWTAPEVLSEKQDIDYILADVYSFGIIMWELMTRLRP 994          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.539e-23
Identity = 68/199 (34.17%), Postives = 103/199 (51.76%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLR-HRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQP---KVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGR 641
            E+LG G +G  Y+  L +    + VK++  E   G +EF  ++ ++GR+  H N+  L  Y   K E LLVYDY   G+    L+      +  L+W  R  +    A G+ ++H      ++H ++K+ NVLL  EL+  + DFG+A L  H     T     +LGY APE   T K T  +DV+SFG  LLE+  G+
Sbjct:  345 EVLGKGSYGTTYKAILEEGTT-VVVKRLK-EVAAGKREFEQQMEAVGRISPHVNVAPLRAYYFSKDEKLLVYDYYQGGNFSMLLHGNNEGGRAALDWETRLRICLEAARGISHIHSASGAKLLHGNIKSPNVLLTQELHVCVSDFGIAPLMSH----HTLIPSRSLGYRAPEAIETRKHTQKSDVYSFGVLLLEMLTGK 537          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.246e-22
Identity = 55/173 (31.79%), Postives = 95/173 (54.91%), Query Frame = 3
Query:  123 IAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGR 641
            +AVKK+ +      K   A++ +I ++RH+N+ ++LG+C +   + L+Y++  NGSL   L ++    L W  R  +  GVA  L Y+ +++   ++HR++K++N+ LD +   +L DF L  +          H      Y APE+  + KAT   DV+SFG  LLE+  G+
Sbjct:  614 LAVKKLVNSKNISSKSLKAQVRTIAKIRHKNITRILGFCFKDEMIFLIYEFTQNGSLHDML-SRAGDQLPWSIRLKIALGVAQALAYISKDYVPHLLHRNLKSANIFLDKDFEPKLSDFALDHIVGETAFQSLVHANTNSCYTAPENHYSKKATEDMDVYSFGVVLLELVTGQ 785          
The following BLAST results are available for this feature:
BLAST of FC931420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DRKA_DICDI5.058e-2436.04Probable serine/threonine-protein kinase drkA OS=D... [more]
Y9955_DICDI6.606e-2433.02Probable serine/threonine-protein kinase DDB_G0267... [more]
Y2267_ARATH6.606e-2433.50Probable inactive receptor kinase At2g26730 OS=Ara... [more]
Y5516_ARATH1.127e-2333.94Probable receptor kinase At5g05160 OS=Arabidopsis ... [more]
Y3288_ARATH1.127e-2332.16Probable inactive receptor kinase At3g02880 OS=Ara... [more]
EPB1B_XENLA1.472e-2332.33Ephrin type-B receptor 1-B (Fragment) OS=Xenopus l... [more]
RLK_ARATH1.922e-2334.33Probable LRR receptor-like serine/threonine-protei... [more]
YR818_MIMIV7.304e-2333.50Putative serine/threonine-protein kinase/receptor ... [more]
Y3868_ARATH9.539e-2334.17Probable inactive receptor kinase At3g08680 OS=Ara... [more]
Y5694_ARATH1.246e-2231.79Probably inactive leucine-rich repeat receptor-lik... [more]

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Properties
Property NameValue
Genbank descriptionC34104H09EF PostHarvP1 Citrus clementina cDNA clone C34104H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931420 ID=FC931420; Name=FC931420; organism=Citrus clementina; type=EST; length=700bp
CTCACAGGTTCAGGTACAAAGATCTTTACATTGCCACTAAAGGGTTCAGA
GAGAAAGAACTGCTAGGCAGCGGCGGATTTGGGAGAGTGTATAGGGGTAC
ACTGCCCAAATCCAAAATTGAGATTGCAGTGAAGAAGATTTCTCACGAAT
CCAGACAGGGGATGAAGGAATTCGTTGCGGAGATTGTGAGCATCGGTCGC
CTCAGGCACCGGAATTTAGTGCAACTCTTGGGATATTGCCGGCGTAAAGG
GGAGCTGCTTTTGGTCTATGATTACATGCCTAATGGAAGCTTAGACAAAT
ACCTCTATAACCAACCAAAAGTCACACTAAACTGGAGACAAAGATATGGA
GTCATCAAAGGTGTCGCATTAGGCCTGTTATATTTGCACGAAGAATGGGA
ACAAGTTGTGATTCACAGAGATGTTAAGGCAAGTAACGTGTTGCTTGATG
GTGAATTAAACGGAAGATTGGGAGATTTCGGCCTGGCAAGATTATACGAC
CACGGAACAGATCCACAAACAACGCACGTTGTGGGAACACTTGGGTACCT
TGCCCCTGAGCACAGTCGGACAGGCAAGGCCACCACAAGCGCTGATGTGT
TTTCATTTGGGGCATTTTTGCTTGAAGTTGCTTGCGGGAGAAGGCCAATT
GAGAGACAGAGCCAGAAGAGAATTTATTTTGGTTGATTGCGTGNTTGACT
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