FC931420

Overview
NameFC931420
Unique NameFC931420
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: EPHB5_CHICK (Ephrin type-B receptor 5 OS=Gallus gallus GN=EPHB5 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.183e-22
Identity = 69/207 (33.33%), Postives = 120/207 (57.97%), Query Frame = 3
Query:   54 KELLGSGGFGRVYRGTLP---KSKIEIAVKKI-SHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYDHGTDPQTTHVVG---TLGYLAPEHSRTGKATTSADVFSFGAFLLEV-ACGRRP 647
            +E++GSG FG V  G L    K +  +A+K + S  + +  +EF++E   +G+  H N++ L G   +   +++V ++M NGSLD +L  Q +   +  Q  G+++G+A G+ YL    +   +HRD+ A N+L++  L  ++ DFGL+R L D  ++P  T  +G    + + APE  +  K T+S+DV+S+G  + EV + G RP
Sbjct:  640 EEVIGSGEFGEVCFGRLKHPGKREYTVAIKTLKSGYTDEQRREFLSEASIMGQFEHPNVIHLEGVVTKSRPVMIVTEFMENGSLDSFL-RQKEGQFSVLQLVGMLRGIAAGMRYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDASNPTYTGALGCKIPIRWTAPEAVQYRKFTSSSDVWSYGIVMWEVMSYGERP 842          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: EPHA2_MOUSE (Ephrin type-A receptor 2 OS=Mus musculus GN=Epha2 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.183e-22
Identity = 66/209 (31.58%), Postives = 120/209 (57.42%), Query Frame = 3
Query:   54 KELLGSGGFGRVYRGTLP----KSKIEIAVK--KISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVG----TLGYLAPEHSRTGKATTSADVFSFGAFLLEV-ACGRRP 647
            ++++G+G FG VY+GTL     K +I +A+K  K  +  +Q + +F++E   +G+  H N++ L G   +   ++++ +YM NG+LDK+L  +     +  Q  G+++G+A G+ YL        +HRD+ A N+L++  L  ++ DFGL+R+ +   DP+ T+        + + APE     K T+++DV+S+G  + EV   G RP
Sbjct:  617 QKVIGAGEFGEVYKGTLKASSGKKEIPVAIKTLKAGYTEKQRV-DFLSEASIMGQFSHHNIIPLEGVVSKYKPMMIITEYMENGALDKFL-REKDGEFSVLQLVGMLRGIASGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE--DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSYGIVMWEVMTYGERP 818          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y9871_DICDI (Probable serine/threonine-protein kinase DDB_G0271682 OS=Dictyostelium discoideum GN=DDB_G0271682 PE=3 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.075e-22
Identity = 72/211 (34.12%), Postives = 106/211 (50.24%), Query Frame = 3
Query:   48 REKELL-----GSGGFGRV----YRGTLPKSKIEIAVKKI--SHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRP 647
            +E ELL     GSG  G V    ++GT       +AVK I  S   +   +EF  E+  +  LRH N+V  +G C   G L ++ +Y+  GSL   L    K  L+   +  ++  VA G+ YLH  +   +IHRD+K+ N+L+D   N ++ DFGL+R    G         GTL ++APE       TT  DV+SFG  L E+   ++P
Sbjct:  356 QENELLFIKKIGSGACGEVCQYEWKGT------PVAVKTIFKSLLRKDKKEEFEKEVSILKCLRHPNVVLFMGTCLLNGNLAIITEYLNRGSLRDVLTTMNKSELSLSVKVKMLIDVAQGMNYLHT-YSPPIIHRDLKSLNLLVDNNFNVKVSDFGLSRFISGGIGSSAKTFCGTLSWIAPEVFNGSGYTTKVDVYSFGIVLWEILTHKQP 559          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: M3KL4_MOUSE (Mitogen-activated protein kinase kinase kinase OS=Mus musculus GN=Mlk4 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.075e-22
Identity = 73/226 (32.30%), Postives = 111/226 (49.12%), Query Frame = 3
Query:   54 KELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRL----RHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQ----------------PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNG--------RLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRP 647
            KEL+G+GGFG+VYR T      E+AVK    +  Q        +    RL    RH N++QL G C R+  L LV ++   G+L++ L                   P+V +NW  +      +A G+LYLHEE    ++HRD+K+SN+LL  ++          ++ DFGLAR +   T        GT  ++APE  R+   +  +D++S+G  L E+  G  P
Sbjct:  113 KELIGAGGFGQVYRATWQGQ--EVAVKAARRDPEQDAAAAAESVRREARLFAMLRHPNIIQLRGVCLRQPHLCLVLEFARGGALNRALAAAASDPRAPGPRRARRIPPQVLVNWAVQ------IARGMLYLHEEAVVPILHRDLKSSNILLLEKIEHDDICNKTLKITDFGLAREWHRTT---RMSAAGTYAWMAPEVIRSSLFSKGSDIWSYGVLLWELLTGEVP 327          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: EPHA2_MACFA (Ephrin type-A receptor 2 OS=Macaca fascicularis GN=EPHA2 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.075e-22
Identity = 65/209 (31.10%), Postives = 120/209 (57.42%), Query Frame = 3
Query:   54 KELLGSGGFGRVYRGTLP----KSKIEIAVK--KISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVG----TLGYLAPEHSRTGKATTSADVFSFGAFLLEV-ACGRRP 647
            ++++G+G FG VY+GTL     K ++ +A+K  K  +  +Q + +F+ E   +G+  H N+++L G   +   ++++ ++M NG+LDK+L  +     +  Q  G+++G+A G+ YL        +HRD+ A N+L++  L  ++ DFGL+R+ +   DP+ T+        + + APE     K T+++DV+SFG  + EV   G RP
Sbjct:  616 QKVIGAGEFGEVYKGTLKTSSGKKEVPVAIKTLKAGYTEKQRV-DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEFMENGALDKFL-REKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE--DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 817          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21
Identity = 68/207 (32.85%), Postives = 103/207 (49.76%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRL-RHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQ---PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQSQ 665
            E+LG G +G  Y+  L +S   + VK++  E   G +EF  ++  I R+  H ++V L  Y   K E L+V DY P G+L   L+      K  L+W  R  +    A G+ +LH        H ++K+SNV++  E +  + DFGL  L      P         GY APE   T K T  +DV+SFG  +LE+  G+ P++  S+
Sbjct:  362 EVLGKGSYGTAYKAVLEESTT-VVVKRLK-EVAAGKREFEQQMEIISRVGNHPSVVPLRAYYYSKDEKLMVCDYYPAGNLSSLLHGNRGSEKTPLDWDSRVKITLSAAKGIAHLHAAGGPKFSHGNIKSSNVIMKQESDACISDFGLTPLMAVPIAPMRG-----AGYRAPEVMETRKHTHKSDVYSFGVLILEMLTGKSPVQSPSR 561          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y4372_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g37250 OS=Arabidopsis thaliana GN=At4g37250 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21
Identity = 75/246 (30.49%), Postives = 115/246 (46.75%), Query Frame = 3
Query:   18 KDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHE--SRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLY-----NQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGT-------------------------------DPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGR 641
            K++ I T       +LG+ G   +Y+  L   ++  AV+++     S++  K+F   I +IG+L H NLV+L G+     E L++YD++PNGSL    Y     +     L W  R  + KG+A GL YLHE+     +H ++K SN+LL  ++  ++GDFGL RL    T                                P  + V     Y APE  R+ K +   DV+ FG  LLE+  G+
Sbjct:  440 KEMEIETLLKASAYILGATGSSIMYKAVLEDGRV-FAVRRLGENGLSQRRFKDFEPHIRAIGKLVHPNLVRLCGFYWGTDEKLVIYDFVPNGSLVNPRYRKGGGSSSPYHLPWETRLKIAKGIARGLAYLHEKKH---VHGNLKPSNILLGHDMEPKIGDFGLERLLTGETSYIRAGGSSRIFSSKRYTTSSREFSSIGPTPSPSPSSVGAMSPYCAPESFRSLKPSPKWDVYGFGVILLELLTGK 681          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: GEFX_DICDI (RasGEF domain-containing serine/threonine-protein kinase X OS=Dictyostelium discoideum GN=gefX PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21
Identity = 67/210 (31.90%), Postives = 108/210 (51.43%), Query Frame = 3
Query:   21 DLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISH-ESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRP 647
            D+   +  F EK  +G G FG V+RG      +++A+KKI   +  + +K    E+  +  LRH  +V   G C     L +V +++  G + + L   P +   W +R  +   +A  +++LH +    +IHRD+K+ N+LLD     RL DFG AR+ +     +   + GT G++APE        TS DVFS+G  L E+  GR+P
Sbjct:   15 DIPFESLEFNEK--IGKGSFGSVFRGCY--LGLDVAIKKIEKADDPEYLKYIDREVSMLQSLRHPFIVNFSGICVHSSGLYIVTEFVSGGDVRQLLKKTPPI--GWDKRVSIAVDLAKAMVFLHAK---KIIHRDLKSKNILLDEFQRIRLCDFGFARMSEQTKKSRHMTMCGTEGWVAPEILLGMSYDTSCDVFSYGVVLAELITGRKP 215          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y5126_ARATH (Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21
Identity = 65/214 (30.37%), Postives = 107/214 (50.00%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGR---VYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGR 641
            F  + +  AT GF  + ++   G      VY+G L   +  IAVK+ + +S    ++F+ E  ++G+LR+  +  LLG C    E LL+ ++MPN +L K+L++     + W  R  V   +A  L Y   +     ++ D+ A  VL D + N RL  FGL +    G    T      L +  PE+ RTG+ T  + ++SFG  LL++  G+
Sbjct:   44 FSIETIRNATSGFAAENIVSEHGERAPNVVYKGKLENQR-RIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLGCCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGR--ALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYST-----NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 249          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: EPHB3_DANRE (Ephrin type-B receptor 3 (Fragment) OS=Danio rerio GN=ephb3 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21
Identity = 69/208 (33.17%), Postives = 122/208 (58.65%), Query Frame = 3
Query:   54 KELLGSGGFGRVYRGTLPKS---KIEIAVKKI-SHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYL-YNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYDHGTDPQTTHVVG---TLGYLAPEHSRTGKATTSADVFSFGAFLLEV-ACGRRP 647
            +E++G+G FG V RG L ++   +  +A+K + +  +    ++F++E   +G+  H N++ L G   R   +L+V ++M NG+LD +L  N  + T+   Q  G+++G+A G+ YL    +   +HRD+ A NVL++  L  ++ DFGL+R L D+ +DP  T  +G    + + APE     K T+++DV+S+G  + EV + G RP
Sbjct:  190 EEVIGAGEFGEVCRGRLKQAGRKETTVAIKTLKAGYTEHQRRDFLSEASIMGQFDHPNVIHLEGVLTRSCPVLIVTEFMENGALDSFLRLNDGRFTVT--QLVGMLRGIAAGMKYLS---DMNYVHRDLAARNVLVNSNLVCKVSDFGLSRFLDDNSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVMSFGERP 392          
The following BLAST results are available for this feature:
BLAST of FC931420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EPHB5_CHICK6.183e-2233.33Ephrin type-B receptor 5 OS=Gallus gallus GN=EPHB5... [more]
EPHA2_MOUSE6.183e-2231.58Ephrin type-A receptor 2 OS=Mus musculus GN=Epha2 ... [more]
Y9871_DICDI8.075e-2234.12Probable serine/threonine-protein kinase DDB_G0271... [more]
M3KL4_MOUSE8.075e-2232.30Mitogen-activated protein kinase kinase kinase OS=... [more]
EPHA2_MACFA8.075e-2231.10Ephrin type-A receptor 2 OS=Macaca fascicularis GN... [more]
Y5830_ARATH1.055e-2132.85Probable inactive receptor kinase At5g58300 OS=Ara... [more]
Y4372_ARATH1.055e-2130.49Probable LRR receptor-like serine/threonine-protei... [more]
GEFX_DICDI1.055e-2131.90RasGEF domain-containing serine/threonine-protein ... [more]
Y5126_ARATH1.377e-2130.37Probable serine/threonine-protein kinase At5g41260... [more]
EPHB3_DANRE1.377e-2133.17Ephrin type-B receptor 3 (Fragment) OS=Danio rerio... [more]

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Properties
Property NameValue
Genbank descriptionC34104H09EF PostHarvP1 Citrus clementina cDNA clone C34104H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931420 ID=FC931420; Name=FC931420; organism=Citrus clementina; type=EST; length=700bp
CTCACAGGTTCAGGTACAAAGATCTTTACATTGCCACTAAAGGGTTCAGA
GAGAAAGAACTGCTAGGCAGCGGCGGATTTGGGAGAGTGTATAGGGGTAC
ACTGCCCAAATCCAAAATTGAGATTGCAGTGAAGAAGATTTCTCACGAAT
CCAGACAGGGGATGAAGGAATTCGTTGCGGAGATTGTGAGCATCGGTCGC
CTCAGGCACCGGAATTTAGTGCAACTCTTGGGATATTGCCGGCGTAAAGG
GGAGCTGCTTTTGGTCTATGATTACATGCCTAATGGAAGCTTAGACAAAT
ACCTCTATAACCAACCAAAAGTCACACTAAACTGGAGACAAAGATATGGA
GTCATCAAAGGTGTCGCATTAGGCCTGTTATATTTGCACGAAGAATGGGA
ACAAGTTGTGATTCACAGAGATGTTAAGGCAAGTAACGTGTTGCTTGATG
GTGAATTAAACGGAAGATTGGGAGATTTCGGCCTGGCAAGATTATACGAC
CACGGAACAGATCCACAAACAACGCACGTTGTGGGAACACTTGGGTACCT
TGCCCCTGAGCACAGTCGGACAGGCAAGGCCACCACAAGCGCTGATGTGT
TTTCATTTGGGGCATTTTTGCTTGAAGTTGCTTGCGGGAGAAGGCCAATT
GAGAGACAGAGCCAGAAGAGAATTTATTTTGGTTGATTGCGTGNTTGACT
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